RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 STK3Q13188 491 aa11.14□□□□□ -0.63
CDK4-205ENST00000547853 GRB10Q13322 594 aa11.14□□□□□ -0.63
CDK4-205ENST00000547853 ACVR2BQ13705 512 aa11.14□□□□□ -0.63
CDK4-205ENST00000547853 PTPN14Q15678 1187 aa11.14□□□□□ -0.63
CDK4-205ENST00000547853 TMEM67Q5HYA8 995 aa11.14□□□□□ -0.63
CDK4-205ENST00000547853 GNASQ5JWF2 1037 aa11.14□□□□□ -0.63
CDK4-205ENST00000547853 ADALQ6DHV7 355 aa11.14□□□□□ -0.63
CDK4-205ENST00000547853 C17orf53Q8N3J3 647 aaPredicted RBP11.14□□□□□ -0.63
CDK4-205ENST00000547853 ARNTL2Q8WYA1 636 aa11.14□□□□□ -0.63
CDK4-205ENST00000547853 VTI1AQ96AJ9 217 aa11.14□□□□□ -0.63
CDK4-205ENST00000547853 SCLYQ96I15 445 aa11.14□□□□□ -0.63
CDK4-205ENST00000547853 FBXL18Q96ME1 805 aa11.14□□□□□ -0.63
CDK4-205ENST00000547853 AGBL1Q96MI9 1066 aa11.14□□□□□ -0.63
CDK4-205ENST00000547853 TRPV6Q9H1D0 765 aa11.14□□□□□ -0.63
CDK4-205ENST00000547853 SH2D4AQ9H788 454 aa11.14□□□□□ -0.63
CDK4-205ENST00000547853 ARHGEF10LQ9HCE6 1279 aa11.14□□□□□ -0.63
CDK4-205ENST00000547853 NLRC5Q86WI3 1866 aa11.13□□□□□ -0.63
CDK4-205ENST00000547853 JAK2O60674 1132 aa11.13□□□□□ -0.63
CDK4-205ENST00000547853 PFKMP08237 780 aa11.13□□□□□ -0.63
CDK4-205ENST00000547853 CYP2D6P10635 497 aa11.13□□□□□ -0.63
CDK4-205ENST00000547853 ZSCAN20P17040 1043 aaPredicted RBP11.13□□□□□ -0.63
CDK4-205ENST00000547853 ADD1P35611 737 aaKnown RBP11.13□□□□□ -0.63
CDK4-205ENST00000547853 NCBP1Q09161 790 aaKnown RBP11.13□□□□□ -0.63
CDK4-205ENST00000547853 CCDC158Q5M9N0 1113 aa11.13□□□□□ -0.63
CDK4-205ENST00000547853 CXCL17Q6UXB2 119 aa11.13□□□□□ -0.63
CDK4-205ENST00000547853 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.13□□□□□ -0.63
CDK4-205ENST00000547853 ZNF397Q8NF99 534 aaPredicted RBP11.13□□□□□ -0.63
CDK4-205ENST00000547853 ENGASEQ8NFI3 743 aa11.13□□□□□ -0.63
CDK4-205ENST00000547853 KIF18AQ8NI77 898 aa11.13□□□□□ -0.63
CDK4-205ENST00000547853 SLC9A7Q96T83 725 aa11.13□□□□□ -0.63
CDK4-205ENST00000547853 TEX13BQ9BXU2 312 aa11.13□□□□□ -0.63
CDK4-205ENST00000547853 ABHD16BQ9H3Z7 469 aa11.13□□□□□ -0.63
CDK4-205ENST00000547853 SPC25Q9HBM1 224 aa11.13□□□□□ -0.63
CDK4-205ENST00000547853 POLR3EQ9NVU0 708 aa11.13□□□□□ -0.63
CDK4-205ENST00000547853 PAG1Q9NWQ8 432 aa11.13□□□□□ -0.63
CDK4-205ENST00000547853 RNF113AO15541 343 aaKnown RBP11.12□□□□□ -0.63
CDK4-205ENST00000547853 POLR3DP05423 398 aaPredicted RBP11.12□□□□□ -0.63
CDK4-205ENST00000547853 SNRNP48Q6IEG0 339 aaKnown RBP11.12□□□□□ -0.63
CDK4-205ENST00000547853 FAM173BQ6P4H8 233 aa11.12□□□□□ -0.63
CDK4-205ENST00000547853 NYAP1Q6ZVC0 841 aa11.12□□□□□ -0.63
CDK4-205ENST00000547853 ARMCX2Q7L311 632 aa11.12□□□□□ -0.63
CDK4-205ENST00000547853 FAM178BQ8IXR5 827 aa11.12□□□□□ -0.63
CDK4-205ENST00000547853 GJD3Q8N144 294 aa11.12□□□□□ -0.63
CDK4-205ENST00000547853 FSIP1Q8NA03 581 aa11.12□□□□□ -0.63
CDK4-205ENST00000547853 GDPD5Q8WTR4 605 aa11.12□□□□□ -0.63
CDK4-205ENST00000547853 CACTINQ8WUQ7 758 aaKnown RBP11.12□□□□□ -0.63
CDK4-205ENST00000547853 C16orf45Q96MC5 204 aaPredicted RBP11.12□□□□□ -0.63
CDK4-205ENST00000547853 TIGD1Q96MW7 591 aa11.12□□□□□ -0.63
CDK4-205ENST00000547853 DNAJC2Q99543 621 aaKnown RBP11.12□□□□□ -0.63
CDK4-205ENST00000547853 KCNH6Q9H252 994 aa11.12□□□□□ -0.63
CDK4-205ENST00000547853 MCM9Q9NXL9 1143 aa11.12□□□□□ -0.63
CDK4-205ENST00000547853 RIPK3Q9Y572 518 aa11.12□□□□□ -0.63
CDK4-205ENST00000547853 ZFHX2Q9C0A1 2572 aaPredicted RBP11.11□□□□□ -0.63
CDK4-205ENST00000547853 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.11□□□□□ -0.63
CDK4-205ENST00000547853 E7EWF7 191 aa11.11□□□□□ -0.63
CDK4-205ENST00000547853 IKBKBO14920 756 aa11.11□□□□□ -0.63
CDK4-205ENST00000547853 CBFA2T2O43439 604 aa11.11□□□□□ -0.63
CDK4-205ENST00000547853 CABYRO75952 493 aa11.11□□□□□ -0.63
CDK4-205ENST00000547853 CDKL5O76039 1030 aa11.11□□□□□ -0.63
CDK4-205ENST00000547853 SKILP12757 684 aa11.11□□□□□ -0.63
CDK4-205ENST00000547853 ME1P48163 572 aa11.11□□□□□ -0.63
CDK4-205ENST00000547853 SNW1Q13573 536 aaKnown RBP11.11□□□□□ -0.63
CDK4-205ENST00000547853 ITGA7Q13683 1181 aa11.11□□□□□ -0.63
CDK4-205ENST00000547853 TPRNQ4KMQ1 711 aa11.11□□□□□ -0.63
CDK4-205ENST00000547853 FAM83BQ5T0W9 1011 aa11.11□□□□□ -0.63
CDK4-205ENST00000547853 TMED8Q6PL24 325 aaPredicted RBP11.11□□□□□ -0.63
CDK4-205ENST00000547853 TLK2Q86UE8 772 aa11.11□□□□□ -0.63
CDK4-205ENST00000547853 RPUSD2Q8IZ73 545 aaKnown RBP11.11□□□□□ -0.63
CDK4-205ENST00000547853 TCEANC2Q96MN5 208 aa11.11□□□□□ -0.63
CDK4-205ENST00000547853 UIMC1Q96RL1 719 aa11.11□□□□□ -0.63
CDK4-205ENST00000547853 UBE2ZQ9H832 354 aaPredicted RBP11.11□□□□□ -0.63
CDK4-205ENST00000547853 SWAP70Q9UH65 585 aa11.11□□□□□ -0.63
CDK4-205ENST00000547853 MICAL3Q7RTP6 2002 aa11.11□□□□□ -0.63
CDK4-205ENST00000547853 MYO15AQ9UKN7 3530 aa11.1□□□□□ -0.63
CDK4-205ENST00000547853 CCDC69A6NI79 296 aa11.1□□□□□ -0.63
CDK4-205ENST00000547853 IL9P15248 144 aa11.1□□□□□ -0.63
CDK4-205ENST00000547853 PDIA3P30101 505 aaKnown RBP11.1□□□□□ -0.63
CDK4-205ENST00000547853 PSMC6P62333 389 aa11.1□□□□□ -0.63
CDK4-205ENST00000547853 SF3A1Q15459 793 aaKnown RBP11.1□□□□□ -0.63
CDK4-205ENST00000547853 FSCN1Q16658 493 aaKnown RBP11.1□□□□□ -0.63
CDK4-205ENST00000547853 IMMTQ16891 758 aaKnown RBP11.1□□□□□ -0.63
CDK4-205ENST00000547853 LEXMQ3ZCV2 418 aa11.1□□□□□ -0.63
CDK4-205ENST00000547853 FCHSD1Q86WN1 690 aa11.1□□□□□ -0.63
CDK4-205ENST00000547853 HERC6Q8IVU3 1022 aa11.1□□□□□ -0.63
CDK4-205ENST00000547853 CCDC144CPQ8IYA2 1237 aa11.1□□□□□ -0.63
CDK4-205ENST00000547853 ELOA2Q8IYF1 753 aaPredicted RBP11.1□□□□□ -0.63
CDK4-205ENST00000547853 FMR1NBQ8N0W7 255 aaPredicted RBP11.1□□□□□ -0.63
CDK4-205ENST00000547853 SDR42E1Q8WUS8 393 aa11.1□□□□□ -0.63
CDK4-205ENST00000547853 ANKS1AQ92625 1134 aa11.1□□□□□ -0.63
CDK4-205ENST00000547853 DYNLL2Q96FJ2 89 aa11.1□□□□□ -0.63
CDK4-205ENST00000547853 USP28Q96RU2 1077 aa11.1□□□□□ -0.63
CDK4-205ENST00000547853 PHOX2BQ99453 314 aa11.1□□□□□ -0.63
CDK4-205ENST00000547853 SRRTQ9BXP5 876 aaKnown RBP11.1□□□□□ -0.63
CDK4-205ENST00000547853 DCP1AQ9NPI6 582 aaPredicted RBP11.1□□□□□ -0.63
CDK4-205ENST00000547853 DDX41Q9UJV9 622 aaKnown RBP11.1□□□□□ -0.63
CDK4-205ENST00000547853 GNEQ9Y223 722 aaKnown RBP11.1□□□□□ -0.63
CDK4-205ENST00000547853 MORC2Q9Y6X9 1032 aaPredicted RBP11.1□□□□□ -0.63
CDK4-205ENST00000547853 PLXNA3P51805 1871 aa11.1□□□□□ -0.63
CDK4-205ENST00000547853 RALGAPA2Q2PPJ7 1873 aa11.1□□□□□ -0.63
CDK4-205ENST00000547853 DCHS1Q96JQ0 3298 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms