RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 BARX1Q9HBU1 254 aaPredicted RBP4.14□□□□□ -1.75
DEPDC4-204ENST00000547823 FTSJ1Q9UET6 329 aa4.14□□□□□ -1.75
DEPDC4-204ENST00000547823 HS3ST3A1Q9Y663 406 aa4.14□□□□□ -1.75
DEPDC4-204ENST00000547823 TOP2AP11388 1531 aaKnown RBP4.14□□□□□ -1.75
DEPDC4-204ENST00000547823 TOP2BQ02880 1626 aa4.13□□□□□ -1.75
DEPDC4-204ENST00000547823 PPRC1Q5VV67 1664 aaKnown RBP4.13□□□□□ -1.75
DEPDC4-204ENST00000547823 PDIA4P13667 645 aaKnown RBP4.13□□□□□ -1.75
DEPDC4-204ENST00000547823 GTF2A2P52657 109 aa4.13□□□□□ -1.75
DEPDC4-204ENST00000547823 INHBEP58166 350 aa4.13□□□□□ -1.75
DEPDC4-204ENST00000547823 SLC7A5Q01650 507 aa4.13□□□□□ -1.75
DEPDC4-204ENST00000547823 R3HDM1Q15032 1099 aaKnown RBP4.13□□□□□ -1.75
DEPDC4-204ENST00000547823 ZYXQ15942 572 aaKnown RBP4.13□□□□□ -1.75
DEPDC4-204ENST00000547823 SMN1Q16637 294 aaKnown RBP4.13□□□□□ -1.75
DEPDC4-204ENST00000547823 GNPTABQ3T906 1256 aa4.13□□□□□ -1.75
DEPDC4-204ENST00000547823 ZNF326Q5BKZ1 582 aaKnown RBP4.13□□□□□ -1.75
DEPDC4-204ENST00000547823 FBXW10Q5XX13 1052 aa4.13□□□□□ -1.75
DEPDC4-204ENST00000547823 IQCEQ6IPM2 695 aa4.13□□□□□ -1.75
DEPDC4-204ENST00000547823 ZNF585AQ6P3V2 769 aa4.13□□□□□ -1.75
DEPDC4-204ENST00000547823 ADAT2Q7Z6V5 191 aaKnown RBP4.13□□□□□ -1.75
DEPDC4-204ENST00000547823 PALM2Q8IXS6 379 aa4.13□□□□□ -1.75
DEPDC4-204ENST00000547823 ADCY4Q8NFM4 1077 aa4.13□□□□□ -1.75
DEPDC4-204ENST00000547823 OR6P1Q8NGX9 317 aa4.13□□□□□ -1.75
DEPDC4-204ENST00000547823 SPATA32Q96LK8 384 aa4.13□□□□□ -1.75
DEPDC4-204ENST00000547823 TMEM209Q96SK2 561 aa4.13□□□□□ -1.75
DEPDC4-204ENST00000547823 MCMBPQ9BTE3 642 aa4.13□□□□□ -1.75
DEPDC4-204ENST00000547823 FAM86C1Q9NVL1 165 aa4.13□□□□□ -1.75
DEPDC4-204ENST00000547823 MARCH2Q9P0N8 246 aa4.13□□□□□ -1.75
DEPDC4-204ENST00000547823 ZNF652Q9Y2D9 606 aa4.13□□□□□ -1.75
DEPDC4-204ENST00000547823 SIT1Q9Y3P8 196 aa4.13□□□□□ -1.75
DEPDC4-204ENST00000547823 SGSM2O43147 1006 aa4.12□□□□□ -1.75
DEPDC4-204ENST00000547823 PPP1R11O60927 126 aaPredicted RBP4.12□□□□□ -1.75
DEPDC4-204ENST00000547823 ZNF623O75123 536 aa4.12□□□□□ -1.75
DEPDC4-204ENST00000547823 THBDP07204 575 aa4.12□□□□□ -1.75
DEPDC4-204ENST00000547823 ABHD18Q0P651 414 aa4.12□□□□□ -1.75
DEPDC4-204ENST00000547823 KLF10Q13118 480 aa4.12□□□□□ -1.75
DEPDC4-204ENST00000547823 DPY19L1Q2PZI1 675 aa4.12□□□□□ -1.75
DEPDC4-204ENST00000547823 MILR1Q7Z6M3 343 aa4.12□□□□□ -1.75
DEPDC4-204ENST00000547823 KBTBD2Q8IY47 623 aa4.12□□□□□ -1.75
DEPDC4-204ENST00000547823 Q8N1Y9 231 aa4.12□□□□□ -1.75
DEPDC4-204ENST00000547823 AMER2Q8N7J2 671 aa4.12□□□□□ -1.75
DEPDC4-204ENST00000547823 MBD6Q96DN6 1003 aa4.12□□□□□ -1.75
DEPDC4-204ENST00000547823 CRBNQ96SW2 442 aa4.12□□□□□ -1.75
DEPDC4-204ENST00000547823 ZNF341Q9BYN7 854 aa4.12□□□□□ -1.75
DEPDC4-204ENST00000547823 SEC61A2Q9H9S3 476 aa4.12□□□□□ -1.75
DEPDC4-204ENST00000547823 SUGT1Q9Y2Z0 365 aa4.12□□□□□ -1.75
DEPDC4-204ENST00000547823 ADCY10Q96PN6 1610 aa4.11□□□□□ -1.75
DEPDC4-204ENST00000547823 C22orf46C9J442 243 aa4.11□□□□□ -1.75
DEPDC4-204ENST00000547823 MYO1BO43795 1136 aa4.11□□□□□ -1.75
DEPDC4-204ENST00000547823 VAMP4O75379 141 aa4.11□□□□□ -1.75
DEPDC4-204ENST00000547823 IL13P35225 146 aa4.11□□□□□ -1.75
DEPDC4-204ENST00000547823 RPL11P62913 178 aaKnown RBP4.11□□□□□ -1.75
DEPDC4-204ENST00000547823 ADAM9Q13443 819 aa4.11□□□□□ -1.75
DEPDC4-204ENST00000547823 FHL2Q14192 279 aa4.11□□□□□ -1.75
DEPDC4-204ENST00000547823 MRPL58Q14197 206 aaKnown RBP4.11□□□□□ -1.75
DEPDC4-204ENST00000547823 PRKD1Q15139 912 aaPredicted RBP4.11□□□□□ -1.75
DEPDC4-204ENST00000547823 SPDYAQ5MJ70 313 aa4.11□□□□□ -1.75
DEPDC4-204ENST00000547823 FAM26EQ8N5C1 309 aa4.11□□□□□ -1.75
DEPDC4-204ENST00000547823 COPS5Q92905 334 aa4.11□□□□□ -1.75
DEPDC4-204ENST00000547823 TOE1Q96GM8 510 aaKnown RBP4.11□□□□□ -1.75
DEPDC4-204ENST00000547823 C11orf21Q9P2W6 132 aa4.11□□□□□ -1.75
DEPDC4-204ENST00000547823 COA3Q9Y2R0 106 aaPredicted RBP4.11□□□□□ -1.75
DEPDC4-204ENST00000547823 LTBP3Q9NS15 1303 aa4.11□□□□□ -1.75
DEPDC4-204ENST00000547823 CHGBP05060 677 aa4.1□□□□□ -1.75
DEPDC4-204ENST00000547823 EPHX1P07099 455 aa4.1□□□□□ -1.75
DEPDC4-204ENST00000547823 CR1LQ2VPA4 569 aa4.1□□□□□ -1.75
DEPDC4-204ENST00000547823 MIIPQ5JXC2 388 aa4.1□□□□□ -1.75
DEPDC4-204ENST00000547823 E4F1Q66K89 784 aaPredicted RBP4.1□□□□□ -1.75
DEPDC4-204ENST00000547823 DTLQ9NZJ0 730 aa4.1□□□□□ -1.75
DEPDC4-204ENST00000547823 NUP160Q12769 1436 aa4.1□□□□□ -1.75
DEPDC4-204ENST00000547823 GRIN2AQ12879 1464 aa4.1□□□□□ -1.75
DEPDC4-204ENST00000547823 FGD5Q6ZNL6 1462 aa4.1□□□□□ -1.75
DEPDC4-204ENST00000547823 ANKRD34BA5PLL1 514 aa4.09□□□□□ -1.75
DEPDC4-204ENST00000547823 PLS3P13797 630 aa4.09□□□□□ -1.75
DEPDC4-204ENST00000547823 MCM7P33993 719 aa4.09□□□□□ -1.75
DEPDC4-204ENST00000547823 STAT5AP42229 794 aa4.09□□□□□ -1.75
DEPDC4-204ENST00000547823 ZNF143P52747 638 aaPredicted RBP4.09□□□□□ -1.75
DEPDC4-204ENST00000547823 NFATC3Q12968 1075 aa4.09□□□□□ -1.75
DEPDC4-204ENST00000547823 FOXE3Q13461 319 aa4.09□□□□□ -1.75
DEPDC4-204ENST00000547823 RALYLQ86SE5 291 aaKnown RBP4.09□□□□□ -1.75
DEPDC4-204ENST00000547823 IFNL2Q8IZJ0 200 aa4.09□□□□□ -1.75
DEPDC4-204ENST00000547823 Q8TCH9 128 aa4.09□□□□□ -1.75
DEPDC4-204ENST00000547823 MEGF9Q9H1U4 602 aa4.09□□□□□ -1.75
DEPDC4-204ENST00000547823 CLEC1BQ9P126 229 aa4.09□□□□□ -1.75
DEPDC4-204ENST00000547823 ADAM29Q9UKF5 820 aa4.09□□□□□ -1.75
DEPDC4-204ENST00000547823 TIMM13Q9Y5L4 95 aaPredicted RBP4.09□□□□□ -1.75
DEPDC4-204ENST00000547823 X6R8D5 127 aa4.09□□□□□ -1.75
DEPDC4-204ENST00000547823 CCDC88BA6NC98 1476 aa4.09□□□□□ -1.75
DEPDC4-204ENST00000547823 NOP56O00567 594 aaKnown RBP4.08□□□□□ -1.76
DEPDC4-204ENST00000547823 HGSO14964 777 aaPredicted RBP4.08□□□□□ -1.76
DEPDC4-204ENST00000547823 MAFKO60675 156 aa4.08□□□□□ -1.76
DEPDC4-204ENST00000547823 ZNF76P36508 570 aa4.08□□□□□ -1.76
DEPDC4-204ENST00000547823 TAGLNQ01995 201 aaKnown RBP4.08□□□□□ -1.76
DEPDC4-204ENST00000547823 KCNAB2Q13303 367 aa4.08□□□□□ -1.76
DEPDC4-204ENST00000547823 RNF207Q6ZRF8 634 aa4.08□□□□□ -1.76
DEPDC4-204ENST00000547823 STK32CQ86UX6 486 aa4.08□□□□□ -1.76
DEPDC4-204ENST00000547823 TEX2Q8IWB9 1127 aa4.08□□□□□ -1.76
DEPDC4-204ENST00000547823 PHOSPHO1Q8TCT1 267 aa4.08□□□□□ -1.76
DEPDC4-204ENST00000547823 ABCA5Q8WWZ7 1642 aa4.08□□□□□ -1.76
DEPDC4-204ENST00000547823 DPF3Q92784 378 aa4.08□□□□□ -1.76
DEPDC4-204ENST00000547823 PRG4Q92954 1404 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms