RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 GGPS1O95749 300 aa21.44■■□□□ 1.02
PRPF40B-206ENST00000547764 MMP3P08254 477 aa21.44■■□□□ 1.02
PRPF40B-206ENST00000547764 AP3B2Q13367 1082 aa21.44■■□□□ 1.02
PRPF40B-206ENST00000547764 ITGA7Q13683 1181 aa21.44■■□□□ 1.02
PRPF40B-206ENST00000547764 CELF3Q5SZQ8 465 aaKnown RBP21.44■■□□□ 1.02
PRPF40B-206ENST00000547764 MYSM1Q5VVJ2 828 aa21.44■■□□□ 1.02
PRPF40B-206ENST00000547764 NLRX1Q86UT6 975 aa21.44■■□□□ 1.02
PRPF40B-206ENST00000547764 TOX2Q96NM4 488 aa21.44■■□□□ 1.02
PRPF40B-206ENST00000547764 MTG1Q9BT17 334 aaPredicted RBP21.44■■□□□ 1.02
PRPF40B-206ENST00000547764 ANO3Q9BYT9 981 aa21.44■■□□□ 1.02
PRPF40B-206ENST00000547764 GRIN2DO15399 1336 aa21.44■■□□□ 1.02
PRPF40B-206ENST00000547764 FIBPO43427 364 aa21.43■■□□□ 1.02
PRPF40B-206ENST00000547764 SORBS3O60504 671 aa21.43■■□□□ 1.02
PRPF40B-206ENST00000547764 CDKL5O76039 1030 aa21.43■■□□□ 1.02
PRPF40B-206ENST00000547764 ITGB5P18084 799 aa21.43■■□□□ 1.02
PRPF40B-206ENST00000547764 GNA11P29992 359 aa21.43■■□□□ 1.02
PRPF40B-206ENST00000547764 JAKMIP3Q5VZ66 844 aa21.43■■□□□ 1.02
PRPF40B-206ENST00000547764 CHRDL2Q6WN34 429 aa21.43■■□□□ 1.02
PRPF40B-206ENST00000547764 SH3RF1Q7Z6J0 888 aa21.43■■□□□ 1.02
PRPF40B-206ENST00000547764 NECAB1Q8N987 351 aa21.43■■□□□ 1.02
PRPF40B-206ENST00000547764 SLC43A3Q8NBI5 491 aa21.43■■□□□ 1.02
PRPF40B-206ENST00000547764 CCDC148Q8NFR7 591 aa21.43■■□□□ 1.02
PRPF40B-206ENST00000547764 BCAS3Q9H6U6 928 aa21.43■■□□□ 1.02
PRPF40B-206ENST00000547764 PRDM5Q9NQX1 630 aaPredicted RBP21.43■■□□□ 1.02
PRPF40B-206ENST00000547764 PDLIM7Q9NR12 457 aa21.43■■□□□ 1.02
PRPF40B-206ENST00000547764 SH3GLB2Q9NR46 395 aa21.43■■□□□ 1.02
PRPF40B-206ENST00000547764 PRKAG2Q9UGJ0 569 aa21.43■■□□□ 1.02
PRPF40B-206ENST00000547764 COLQQ9Y215 455 aaPredicted RBP21.43■■□□□ 1.02
PRPF40B-206ENST00000547764 UBIAD1Q9Y5Z9 338 aa21.43■■□□□ 1.02
PRPF40B-206ENST00000547764 MYH7BA7E2Y1 1941 aa21.42■■□□□ 1.02
PRPF40B-206ENST00000547764 DCDC2CA8MYV0 355 aa21.42■■□□□ 1.02
PRPF40B-206ENST00000547764 DTNBO60941 627 aa21.42■■□□□ 1.02
PRPF40B-206ENST00000547764 CTDNEP1O95476 244 aa21.42■■□□□ 1.02
PRPF40B-206ENST00000547764 CLTBP09497 229 aa21.42■■□□□ 1.02
PRPF40B-206ENST00000547764 FAAP100Q0VG06 881 aa21.42■■□□□ 1.02
PRPF40B-206ENST00000547764 MROH7Q68CQ1 1323 aa21.42■■□□□ 1.02
PRPF40B-206ENST00000547764 REXO1Q8N1G1 1221 aaKnown RBP21.42■■□□□ 1.02
PRPF40B-206ENST00000547764 PPTC7Q8NI37 304 aa21.42■■□□□ 1.02
PRPF40B-206ENST00000547764 AIFM3Q96NN9 605 aa21.42■■□□□ 1.02
PRPF40B-206ENST00000547764 MLXIPQ9HAP2 919 aa21.42■■□□□ 1.02
PRPF40B-206ENST00000547764 TRIM43BA6NCK2 446 aa21.41■■□□□ 1.02
PRPF40B-206ENST00000547764 SREBF1P36956 1147 aa21.41■■□□□ 1.02
PRPF40B-206ENST00000547764 NLRP5P59047 1200 aa21.41■■□□□ 1.02
PRPF40B-206ENST00000547764 DGKDQ16760 1214 aa21.41■■□□□ 1.02
PRPF40B-206ENST00000547764 HSDL1Q3SXM5 330 aa21.41■■□□□ 1.02
PRPF40B-206ENST00000547764 FAM126BQ8IXS8 530 aa21.41■■□□□ 1.02
PRPF40B-206ENST00000547764 GTF3C6Q969F1 213 aa21.41■■□□□ 1.02
PRPF40B-206ENST00000547764 TRIM43Q96BQ3 446 aaPredicted RBP21.41■■□□□ 1.02
PRPF40B-206ENST00000547764 GPRASP2Q96D09 838 aa21.41■■□□□ 1.02
PRPF40B-206ENST00000547764 SPATA33Q96N06 139 aa21.41■■□□□ 1.02
PRPF40B-206ENST00000547764 UPF2Q9HAU5 1272 aaKnown RBP21.41■■□□□ 1.02
PRPF40B-206ENST00000547764 MAGEA10P43363 369 aaPredicted RBP21.4■■□□□ 1.02
PRPF40B-206ENST00000547764 NEDD9Q14511 834 aa21.4■■□□□ 1.02
PRPF40B-206ENST00000547764 MCTP2Q6DN12 878 aa21.4■■□□□ 1.02
PRPF40B-206ENST00000547764 BICD2Q8TD16 824 aa21.4■■□□□ 1.02
PRPF40B-206ENST00000547764 RASGRP4Q8TDF6 673 aa21.4■■□□□ 1.02
PRPF40B-206ENST00000547764 CDHR1Q96JP9 859 aa21.4■■□□□ 1.02
PRPF40B-206ENST00000547764 GDF15Q99988 308 aa21.4■■□□□ 1.02
PRPF40B-206ENST00000547764 SENP7Q9BQF6 1050 aa21.4■■□□□ 1.02
PRPF40B-206ENST00000547764 SEZ6LQ9BYH1 1024 aa21.4■■□□□ 1.02
PRPF40B-206ENST00000547764 PRO3102Q9H379 93 aa21.4■■□□□ 1.02
PRPF40B-206ENST00000547764 JADE2Q9NQC1 790 aa21.4■■□□□ 1.02
PRPF40B-206ENST00000547764 TMEM39AQ9NV64 488 aa21.4■■□□□ 1.02
PRPF40B-206ENST00000547764 STK36Q9NRP7 1315 aa21.39■■□□□ 1.01
PRPF40B-206ENST00000547764 ARHGAP4P98171 946 aa21.39■■□□□ 1.01
PRPF40B-206ENST00000547764 MDM2Q00987 491 aaPredicted RBP21.39■■□□□ 1.01
PRPF40B-206ENST00000547764 MTMR1Q13613 665 aa21.39■■□□□ 1.01
PRPF40B-206ENST00000547764 NBPF20Q3BBV1 942 aa21.39■■□□□ 1.01
PRPF40B-206ENST00000547764 CYFIP1Q7L576 1253 aa21.39■■□□□ 1.01
PRPF40B-206ENST00000547764 CYP2W1Q8TAV3 490 aa21.39■■□□□ 1.01
PRPF40B-206ENST00000547764 MXRA8Q9BRK3 442 aa21.39■■□□□ 1.01
PRPF40B-206ENST00000547764 LIMCH1Q9UPQ0 1083 aa21.39■■□□□ 1.01
PRPF40B-206ENST00000547764 SCN10AQ9Y5Y9 1956 aa21.39■■□□□ 1.01
PRPF40B-206ENST00000547764 KIAA0355O15063 1070 aa21.38■■□□□ 1.01
PRPF40B-206ENST00000547764 TLR3O15455 904 aaKnown RBP21.38■■□□□ 1.01
PRPF40B-206ENST00000547764 ATP9AO75110 1047 aa21.38■■□□□ 1.01
PRPF40B-206ENST00000547764 PPFIA4O75335 1185 aa21.38■■□□□ 1.01
PRPF40B-206ENST00000547764 CD4P01730 458 aa21.38■■□□□ 1.01
PRPF40B-206ENST00000547764 HOXD8P13378 290 aaPredicted RBP21.38■■□□□ 1.01
PRPF40B-206ENST00000547764 METTL7BQ6UX53 244 aa21.38■■□□□ 1.01
PRPF40B-206ENST00000547764 PPP1R13LQ8WUF5 828 aa21.38■■□□□ 1.01
PRPF40B-206ENST00000547764 CRYGNQ8WXF5 182 aa21.38■■□□□ 1.01
PRPF40B-206ENST00000547764 KAT2BQ92831 832 aa21.38■■□□□ 1.01
PRPF40B-206ENST00000547764 MAFGO15525 162 aa21.37■■□□□ 1.01
PRPF40B-206ENST00000547764 KCNA2P16389 499 aa21.37■■□□□ 1.01
PRPF40B-206ENST00000547764 ITGB8P26012 769 aa21.37■■□□□ 1.01
PRPF40B-206ENST00000547764 CHMP4BP1P59074 171 aa21.37■■□□□ 1.01
PRPF40B-206ENST00000547764 CEP55Q53EZ4 464 aa21.37■■□□□ 1.01
PRPF40B-206ENST00000547764 FAM177A1Q8N128 213 aaPredicted RBP21.37■■□□□ 1.01
PRPF40B-206ENST00000547764 GIMAP8Q8ND71 665 aaPredicted RBP21.37■■□□□ 1.01
PRPF40B-206ENST00000547764 LBHD1Q9BQE6 289 aaPredicted RBP21.37■■□□□ 1.01
PRPF40B-206ENST00000547764 TRPV6Q9H1D0 765 aa21.37■■□□□ 1.01
PRPF40B-206ENST00000547764 KCNH7Q9NS40 1196 aa21.37■■□□□ 1.01
PRPF40B-206ENST00000547764 ORC3Q9UBD5 711 aaPredicted RBP21.37■■□□□ 1.01
PRPF40B-206ENST00000547764 TBX21Q9UL17 535 aa21.37■■□□□ 1.01
PRPF40B-206ENST00000547764 PCDHA4Q9UN74 947 aa21.37■■□□□ 1.01
PRPF40B-206ENST00000547764 NOP56O00567 594 aaKnown RBP21.36■■□□□ 1.01
PRPF40B-206ENST00000547764 B4GALT4O60513 344 aa21.36■■□□□ 1.01
PRPF40B-206ENST00000547764 CYP3A4P08684 503 aa21.36■■□□□ 1.01
PRPF40B-206ENST00000547764 ZNF286BP0CG31 522 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms