RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 ATG4CQ96DT6 458 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 CDHR1Q96JP9 859 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 PLIN2Q99541 437 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 MPHOSPH6Q99547 160 aaKnown RBP15.03■□□□□ -0
PTCH1-215ENST00000547672 ZNF577Q9BSK1 485 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 TEKT3Q9BXF9 490 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 BLZF1Q9H2G9 400 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 ACAD9Q9H845 621 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 RNF146Q9NTX7 359 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 TBC1D22BQ9NU19 505 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 NFE2L3Q9Y4A8 694 aa15.03■□□□□ -0
PTCH1-215ENST00000547672 IGLV3-22A0A075B6J6 115 aa15.02■□□□□ -0
PTCH1-215ENST00000547672 SPDYE5A6NIY4 337 aa15.02■□□□□ -0
PTCH1-215ENST00000547672 PPP1R3GB7ZBB8 358 aa15.02■□□□□ -0
PTCH1-215ENST00000547672 TPM2P07951 284 aa15.02■□□□□ -0
PTCH1-215ENST00000547672 OSBPP22059 807 aa15.02■□□□□ -0
PTCH1-215ENST00000547672 CCND2P30279 289 aa15.02■□□□□ -0
PTCH1-215ENST00000547672 PDE4DQ08499 809 aa15.02■□□□□ -0
PTCH1-215ENST00000547672 KMT5BQ4FZB7 885 aa15.02■□□□□ -0
PTCH1-215ENST00000547672 EAPPQ56P03 285 aaPredicted RBP15.02■□□□□ -0
PTCH1-215ENST00000547672 ARHGEF16Q5VV41 709 aa15.02■□□□□ -0
PTCH1-215ENST00000547672 NCAPH2Q6IBW4 605 aa15.02■□□□□ -0
PTCH1-215ENST00000547672 SNRNP48Q6IEG0 339 aaKnown RBP15.02■□□□□ -0
PTCH1-215ENST00000547672 FOXR2Q6PJQ5 311 aa15.02■□□□□ -0
PTCH1-215ENST00000547672 NLRX1Q86UT6 975 aa15.02■□□□□ -0
PTCH1-215ENST00000547672 FAM114A1Q8IWE2 563 aa15.02■□□□□ -0
PTCH1-215ENST00000547672 SYTL5Q8TDW5 730 aaPredicted RBP15.02■□□□□ -0
PTCH1-215ENST00000547672 NSUN6Q8TEA1 469 aaKnown RBP15.02■□□□□ -0
PTCH1-215ENST00000547672 TBC1D5Q92609 795 aa15.02■□□□□ -0
PTCH1-215ENST00000547672 STAMQ92783 540 aa15.02■□□□□ -0
PTCH1-215ENST00000547672 LENG9Q96B70 501 aa15.02■□□□□ -0
PTCH1-215ENST00000547672 PNMA5Q96PV4 448 aa15.02■□□□□ -0
PTCH1-215ENST00000547672 MTRQ99707 1265 aa15.02■□□□□ -0
PTCH1-215ENST00000547672 FANCLQ9NW38 375 aa15.02■□□□□ -0
PTCH1-215ENST00000547672 KIAA1024Q9UPX6 916 aa15.02■□□□□ -0
PTCH1-215ENST00000547672 CLEC11AQ9Y240 323 aa15.02■□□□□ -0
PTCH1-215ENST00000547672 ZKSCAN5Q9Y2L8 839 aa15.02■□□□□ -0
PTCH1-215ENST00000547672 FRMPD4Q14CM0 1322 aa15.01□□□□□ -0.01
PTCH1-215ENST00000547672 SYNRGQ9UMZ2 1314 aa15.01□□□□□ -0.01
PTCH1-215ENST00000547672 A0A0G2JLL6 359 aaPredicted RBP15.01□□□□□ -0.01
PTCH1-215ENST00000547672 IPO5O00410 1097 aaKnown RBP15.01□□□□□ -0.01
PTCH1-215ENST00000547672 PSMD10O75832 226 aa15.01□□□□□ -0.01
PTCH1-215ENST00000547672 RPS6P62753 249 aaKnown RBP15.01□□□□□ -0.01
PTCH1-215ENST00000547672 IRX3P78415 501 aaPredicted RBP15.01□□□□□ -0.01
PTCH1-215ENST00000547672 EPHA7Q15375 998 aa15.01□□□□□ -0.01
PTCH1-215ENST00000547672 OTOP1Q7RTM1 612 aa15.01□□□□□ -0.01
PTCH1-215ENST00000547672 PRRT2Q7Z6L0 340 aaPredicted RBP15.01□□□□□ -0.01
PTCH1-215ENST00000547672 ADSSL1Q8N142 457 aa15.01□□□□□ -0.01
PTCH1-215ENST00000547672 SLC10A4Q96EP9 437 aa15.01□□□□□ -0.01
PTCH1-215ENST00000547672 IWS1Q96ST2 819 aa15.01□□□□□ -0.01
PTCH1-215ENST00000547672 RMDN3Q96TC7 470 aa15.01□□□□□ -0.01
PTCH1-215ENST00000547672 JADE2Q9NQC1 790 aa15.01□□□□□ -0.01
PTCH1-215ENST00000547672 BLOC1S4Q9NUP1 217 aa15.01□□□□□ -0.01
PTCH1-215ENST00000547672 KCND2Q9NZV8 630 aa15.01□□□□□ -0.01
PTCH1-215ENST00000547672 KCNH4Q9UQ05 1017 aa15.01□□□□□ -0.01
PTCH1-215ENST00000547672 SSC5DA1L4H1 1573 aa15.01□□□□□ -0.01
PTCH1-215ENST00000547672 PFASO15067 1338 aa15□□□□□ -0.01
PTCH1-215ENST00000547672 A0A087WWV3 80 aa15□□□□□ -0.01
PTCH1-215ENST00000547672 NFIBO00712 420 aa15□□□□□ -0.01
PTCH1-215ENST00000547672 AP5Z1O43299 807 aa15□□□□□ -0.01
PTCH1-215ENST00000547672 KLRC4O43908 158 aa15□□□□□ -0.01
PTCH1-215ENST00000547672 DKC1O60832 514 aaKnown RBP eCLIP15□□□□□ -0.01
PTCH1-215ENST00000547672 SLC25A27O95847 323 aa15□□□□□ -0.01
PTCH1-215ENST00000547672 KRT18P05783 430 aaKnown RBP15□□□□□ -0.01
PTCH1-215ENST00000547672 PLA2G4BP0C869 781 aa15□□□□□ -0.01
PTCH1-215ENST00000547672 MCM6Q14566 821 aa15□□□□□ -0.01
PTCH1-215ENST00000547672 KLHL10Q6JEL2 608 aa15□□□□□ -0.01
PTCH1-215ENST00000547672 NSMFQ6X4W1 530 aa15□□□□□ -0.01
PTCH1-215ENST00000547672 LBX2Q6XYB7 198 aa15□□□□□ -0.01
PTCH1-215ENST00000547672 REPS2Q8NFH8 660 aa15□□□□□ -0.01
PTCH1-215ENST00000547672 DNERQ8NFT8 737 aa15□□□□□ -0.01
PTCH1-215ENST00000547672 RDM1Q8NG50 284 aa15□□□□□ -0.01
PTCH1-215ENST00000547672 NELFBQ8WX92 580 aa15□□□□□ -0.01
PTCH1-215ENST00000547672 NACC1Q96RE7 527 aa15□□□□□ -0.01
PTCH1-215ENST00000547672 P2RX7Q99572 595 aaKnown RBP15□□□□□ -0.01
PTCH1-215ENST00000547672 HOMER2Q9NSB8 354 aa15□□□□□ -0.01
PTCH1-215ENST00000547672 IFNKQ9P0W0 207 aa15□□□□□ -0.01
PTCH1-215ENST00000547672 MAGEC2Q9UBF1 373 aaPredicted RBP15□□□□□ -0.01
PTCH1-215ENST00000547672 UBIAD1Q9Y5Z9 338 aa15□□□□□ -0.01
PTCH1-215ENST00000547672 PHIPQ8WWQ0 1821 aa15□□□□□ -0.01
PTCH1-215ENST00000547672 EYA4O95677 639 aa14.99□□□□□ -0.01
PTCH1-215ENST00000547672 ZNF18P17022 549 aa14.99□□□□□ -0.01
PTCH1-215ENST00000547672 SFNP31947 248 aa14.99□□□□□ -0.01
PTCH1-215ENST00000547672 PRCPP42785 496 aa14.99□□□□□ -0.01
PTCH1-215ENST00000547672 SPIRE1Q08AE8 756 aa14.99□□□□□ -0.01
PTCH1-215ENST00000547672 SNAPC2Q13487 334 aa14.99□□□□□ -0.01
PTCH1-215ENST00000547672 BAATQ14032 418 aaPredicted RBP14.99□□□□□ -0.01
PTCH1-215ENST00000547672 MUM1L1Q5H9M0 696 aa14.99□□□□□ -0.01
PTCH1-215ENST00000547672 LDLRAD1Q5T700 205 aa14.99□□□□□ -0.01
PTCH1-215ENST00000547672 GADL1Q6ZQY3 521 aa14.99□□□□□ -0.01
PTCH1-215ENST00000547672 CATSPER3Q86XQ3 398 aa14.99□□□□□ -0.01
PTCH1-215ENST00000547672 SYT2Q8N9I0 419 aaPredicted RBP14.99□□□□□ -0.01
PTCH1-215ENST00000547672 SPC24Q8NBT2 197 aa14.99□□□□□ -0.01
PTCH1-215ENST00000547672 DDX12PQ92771 950 aa14.99□□□□□ -0.01
PTCH1-215ENST00000547672 GPRASP2Q96D09 838 aa14.99□□□□□ -0.01
PTCH1-215ENST00000547672 EIF2AK1Q9BQI3 630 aaKnown RBP14.99□□□□□ -0.01
PTCH1-215ENST00000547672 THAP9Q9H5L6 903 aa14.99□□□□□ -0.01
PTCH1-215ENST00000547672 ELP3Q9H9T3 547 aa14.99□□□□□ -0.01
PTCH1-215ENST00000547672 PXMP2Q9NR77 195 aa14.99□□□□□ -0.01
PTCH1-215ENST00000547672 VAV3Q9UKW4 847 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms