RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 HSDL1Q3SXM5 330 aa21.47■■□□□ 1.03
CHMP1A-203ENST00000547614 PCNX4Q63HM2 1172 aa21.47■■□□□ 1.03
CHMP1A-203ENST00000547614 RAB11FIP4Q86YS3 637 aa21.47■■□□□ 1.03
CHMP1A-203ENST00000547614 CCDC82Q8N4S0 544 aa21.47■■□□□ 1.03
CHMP1A-203ENST00000547614 RETREG2Q8NC44 543 aa21.47■■□□□ 1.03
CHMP1A-203ENST00000547614 SCLYQ96I15 445 aa21.47■■□□□ 1.03
CHMP1A-203ENST00000547614 TTYH1Q9H313 450 aaPredicted RBP21.47■■□□□ 1.03
CHMP1A-203ENST00000547614 MLXIPQ9HAP2 919 aa21.47■■□□□ 1.03
CHMP1A-203ENST00000547614 SPATA31C2B4DYI2 1134 aa21.46■■□□□ 1.03
CHMP1A-203ENST00000547614 ZBTB43O43298 467 aa21.46■■□□□ 1.03
CHMP1A-203ENST00000547614 FIBPO43427 364 aa21.46■■□□□ 1.03
CHMP1A-203ENST00000547614 NEFLP07196 543 aa21.46■■□□□ 1.03
CHMP1A-203ENST00000547614 DNAJB2P25686 324 aa21.46■■□□□ 1.03
CHMP1A-203ENST00000547614 RFC2P35250 354 aa21.46■■□□□ 1.03
CHMP1A-203ENST00000547614 PSEN2P49810 448 aa21.46■■□□□ 1.03
CHMP1A-203ENST00000547614 NEDD9Q14511 834 aa21.46■■□□□ 1.03
CHMP1A-203ENST00000547614 TEX2Q8IWB9 1127 aa21.46■■□□□ 1.03
CHMP1A-203ENST00000547614 C7orf31Q8N865 590 aa21.46■■□□□ 1.03
CHMP1A-203ENST00000547614 PPP1R13LQ8WUF5 828 aa21.46■■□□□ 1.03
CHMP1A-203ENST00000547614 VWCEQ96DN2 955 aa21.46■■□□□ 1.03
CHMP1A-203ENST00000547614 ZFP91Q96JP5 570 aaPredicted RBP21.46■■□□□ 1.03
CHMP1A-203ENST00000547614 TCEANC2Q96MN5 208 aa21.46■■□□□ 1.03
CHMP1A-203ENST00000547614 GTF2IRD1Q9UHL9 959 aa21.46■■□□□ 1.03
CHMP1A-203ENST00000547614 BRPF3Q9ULD4 1205 aa21.46■■□□□ 1.03
CHMP1A-203ENST00000547614 HSPA4P34932 840 aa21.45■■□□□ 1.02
CHMP1A-203ENST00000547614 MFSD10Q14728 455 aa21.45■■□□□ 1.02
CHMP1A-203ENST00000547614 RTN1Q16799 776 aa21.45■■□□□ 1.02
CHMP1A-203ENST00000547614 KIAA0753Q2KHM9 967 aa21.45■■□□□ 1.02
CHMP1A-203ENST00000547614 GDF6Q6KF10 455 aaPredicted RBP21.45■■□□□ 1.02
CHMP1A-203ENST00000547614 OTOP2Q7RTS6 562 aa21.45■■□□□ 1.02
CHMP1A-203ENST00000547614 CCDC155Q8N6L0 562 aa21.45■■□□□ 1.02
CHMP1A-203ENST00000547614 CAGE1Q8TC20 777 aa21.45■■□□□ 1.02
CHMP1A-203ENST00000547614 GPKOWQ92917 476 aaPredicted RBP eCLIP21.45■■□□□ 1.02
CHMP1A-203ENST00000547614 CTAGE1Q96RT6 745 aa21.45■■□□□ 1.02
CHMP1A-203ENST00000547614 CDX2Q99626 313 aaPredicted RBP21.45■■□□□ 1.02
CHMP1A-203ENST00000547614 CXXC1Q9P0U4 656 aaPredicted RBP21.45■■□□□ 1.02
CHMP1A-203ENST00000547614 hCG_1642624A0A1W2PR95 340 aa21.44■■□□□ 1.02
CHMP1A-203ENST00000547614 REC8O95072 547 aa21.44■■□□□ 1.02
CHMP1A-203ENST00000547614 IQCF3P0C7M6 154 aa21.44■■□□□ 1.02
CHMP1A-203ENST00000547614 ZNF286BP0CG31 522 aa21.44■■□□□ 1.02
CHMP1A-203ENST00000547614 FUT2Q10981 343 aa21.44■■□□□ 1.02
CHMP1A-203ENST00000547614 METTL7BQ6UX53 244 aa21.44■■□□□ 1.02
CHMP1A-203ENST00000547614 SENP7Q9BQF6 1050 aa21.44■■□□□ 1.02
CHMP1A-203ENST00000547614 RTEL1Q9NZ71 1219 aa21.44■■□□□ 1.02
CHMP1A-203ENST00000547614 HDAC6Q9UBN7 1215 aa21.44■■□□□ 1.02
CHMP1A-203ENST00000547614 EPB41L2O43491 1005 aaKnown RBP21.43■■□□□ 1.02
CHMP1A-203ENST00000547614 RBL2Q08999 1139 aa21.43■■□□□ 1.02
CHMP1A-203ENST00000547614 SEMA3FQ13275 785 aa21.43■■□□□ 1.02
CHMP1A-203ENST00000547614 HEATR3Q7Z4Q2 680 aa21.43■■□□□ 1.02
CHMP1A-203ENST00000547614 NLRX1Q86UT6 975 aa21.43■■□□□ 1.02
CHMP1A-203ENST00000547614 SLC17A8Q8NDX2 589 aa21.43■■□□□ 1.02
CHMP1A-203ENST00000547614 AFAP1L1Q8TED9 768 aa21.43■■□□□ 1.02
CHMP1A-203ENST00000547614 TIFAQ96CG3 184 aa21.43■■□□□ 1.02
CHMP1A-203ENST00000547614 C16orf70Q9BSU1 422 aa21.43■■□□□ 1.02
CHMP1A-203ENST00000547614 ALG1Q9BT22 464 aa21.43■■□□□ 1.02
CHMP1A-203ENST00000547614 PBX4Q9BYU1 374 aa21.43■■□□□ 1.02
CHMP1A-203ENST00000547614 SNX14Q9Y5W7 946 aa21.43■■□□□ 1.02
CHMP1A-203ENST00000547614 CNTNAP5Q8WYK1 1306 aa21.43■■□□□ 1.02
CHMP1A-203ENST00000547614 KLF18A0A0U1RQI7 1052 aa21.42■■□□□ 1.02
CHMP1A-203ENST00000547614 GRXCR1A8MXD5 290 aa21.42■■□□□ 1.02
CHMP1A-203ENST00000547614 hCG_1984214I3L0E3 225 aa21.42■■□□□ 1.02
CHMP1A-203ENST00000547614 FGD1P98174 961 aa21.42■■□□□ 1.02
CHMP1A-203ENST00000547614 RAB30Q15771 203 aa21.42■■□□□ 1.02
CHMP1A-203ENST00000547614 FBXL16Q8N461 479 aa21.42■■□□□ 1.02
CHMP1A-203ENST00000547614 ZNF713Q8N859 430 aaPredicted RBP21.42■■□□□ 1.02
CHMP1A-203ENST00000547614 GIMAP8Q8ND71 665 aaPredicted RBP21.42■■□□□ 1.02
CHMP1A-203ENST00000547614 CDHR1Q96JP9 859 aa21.42■■□□□ 1.02
CHMP1A-203ENST00000547614 USP26Q9BXU7 913 aa21.42■■□□□ 1.02
CHMP1A-203ENST00000547614 SLC4A7Q9Y6M7 1214 aa21.42■■□□□ 1.02
CHMP1A-203ENST00000547614 SPDYE3A6NKU9 549 aa21.41■■□□□ 1.02
CHMP1A-203ENST00000547614 GOLGA8AA7E2F4 631 aa21.41■■□□□ 1.02
CHMP1A-203ENST00000547614 GOLGA8BA8MQT2 603 aa21.41■■□□□ 1.02
CHMP1A-203ENST00000547614 NOP56O00567 594 aaKnown RBP21.41■■□□□ 1.02
CHMP1A-203ENST00000547614 SORBS3O60504 671 aa21.41■■□□□ 1.02
CHMP1A-203ENST00000547614 PARNO95453 639 aaKnown RBP21.41■■□□□ 1.02
CHMP1A-203ENST00000547614 ACTN1P12814 892 aa21.41■■□□□ 1.02
CHMP1A-203ENST00000547614 PTK7Q13308 1070 aa21.41■■□□□ 1.02
CHMP1A-203ENST00000547614 PPP1R18Q6NYC8 613 aa21.41■■□□□ 1.02
CHMP1A-203ENST00000547614 BLOC1S2Q6QNY1 142 aa21.41■■□□□ 1.02
CHMP1A-203ENST00000547614 CYFIP1Q7L576 1253 aa21.41■■□□□ 1.02
CHMP1A-203ENST00000547614 DEFB128Q7Z7B8 93 aa21.41■■□□□ 1.02
CHMP1A-203ENST00000547614 GPRASP2Q96D09 838 aa21.41■■□□□ 1.02
CHMP1A-203ENST00000547614 JAKMIP1Q96N16 626 aaKnown RBP21.41■■□□□ 1.02
CHMP1A-203ENST00000547614 ZNF576Q9H609 170 aa21.41■■□□□ 1.02
CHMP1A-203ENST00000547614 BCAS3Q9H6U6 928 aa21.41■■□□□ 1.02
CHMP1A-203ENST00000547614 FAM217BQ9NTX9 383 aaPredicted RBP21.41■■□□□ 1.02
CHMP1A-203ENST00000547614 MSRAQ9UJ68 235 aa21.41■■□□□ 1.02
CHMP1A-203ENST00000547614 V9GY48 417 aaPredicted RBP21.41■■□□□ 1.02
CHMP1A-203ENST00000547614 CCDC196A0A1B0GTZ2 297 aa21.4■■□□□ 1.02
CHMP1A-203ENST00000547614 H3BRB1 525 aa21.4■■□□□ 1.02
CHMP1A-203ENST00000547614 SELPP16109 830 aa21.4■■□□□ 1.02
CHMP1A-203ENST00000547614 PBX2P40425 430 aa21.4■■□□□ 1.02
CHMP1A-203ENST00000547614 UBE2SQ16763 222 aa21.4■■□□□ 1.02
CHMP1A-203ENST00000547614 WWC2Q6AWC2 1192 aa21.4■■□□□ 1.02
CHMP1A-203ENST00000547614 DHX38Q92620 1227 aaKnown RBP21.4■■□□□ 1.02
CHMP1A-203ENST00000547614 TUT1Q9H6E5 874 aaKnown RBP21.4■■□□□ 1.02
CHMP1A-203ENST00000547614 PCDHA6Q9UN73 950 aa21.4■■□□□ 1.02
CHMP1A-203ENST00000547614 PCDHA8Q9Y5H6 950 aa21.4■■□□□ 1.02
CHMP1A-203ENST00000547614 MAFGO15525 162 aa21.39■■□□□ 1.01
CHMP1A-203ENST00000547614 LGALS2P05162 132 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms