RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 F2P00734 622 aa12.76□□□□□ -0.37
TMEM116-203ENST00000546537 LINC00271P0C7V0 271 aa12.76□□□□□ -0.37
TMEM116-203ENST00000546537 RSPH10BP0C881 870 aa12.76□□□□□ -0.37
TMEM116-203ENST00000546537 CTNNB1P35222 781 aa12.76□□□□□ -0.37
TMEM116-203ENST00000546537 BMPR1AP36894 532 aa12.76□□□□□ -0.37
TMEM116-203ENST00000546537 ZNF200P98182 395 aaPredicted RBP12.76□□□□□ -0.37
TMEM116-203ENST00000546537 MFSD10Q14728 455 aa12.76□□□□□ -0.37
TMEM116-203ENST00000546537 PPP4R3BQ5MIZ7 849 aa12.76□□□□□ -0.37
TMEM116-203ENST00000546537 BTNL9Q6UXG8 535 aa12.76□□□□□ -0.37
TMEM116-203ENST00000546537 FTSJ3Q8IY81 847 aaKnown RBP12.76□□□□□ -0.37
TMEM116-203ENST00000546537 FIBCD1Q8N539 461 aa12.76□□□□□ -0.37
TMEM116-203ENST00000546537 SMRP1Q8NCR6 262 aa12.76□□□□□ -0.37
TMEM116-203ENST00000546537 OSBP2Q969R2 916 aa12.76□□□□□ -0.37
TMEM116-203ENST00000546537 C11orf84Q9BUA3 381 aaPredicted RBP12.76□□□□□ -0.37
TMEM116-203ENST00000546537 IGFLR1Q9H665 355 aa12.76□□□□□ -0.37
TMEM116-203ENST00000546537 STX8Q9UNK0 236 aa12.76□□□□□ -0.37
TMEM116-203ENST00000546537 FAM186AA6NE01 2351 aa12.75□□□□□ -0.37
TMEM116-203ENST00000546537 GALR2O43603 387 aaPredicted RBP12.75□□□□□ -0.37
TMEM116-203ENST00000546537 RLBP1P12271 317 aa12.75□□□□□ -0.37
TMEM116-203ENST00000546537 GNAT2P19087 354 aa12.75□□□□□ -0.37
TMEM116-203ENST00000546537 SLC16A2P36021 539 aa12.75□□□□□ -0.37
TMEM116-203ENST00000546537 NBL1P41271 181 aa12.75□□□□□ -0.37
TMEM116-203ENST00000546537 NDUFV1P49821 464 aa12.75□□□□□ -0.37
TMEM116-203ENST00000546537 COASYQ13057 564 aa12.75□□□□□ -0.37
TMEM116-203ENST00000546537 HIC1Q14526 733 aa12.75□□□□□ -0.37
TMEM116-203ENST00000546537 KIAA0753Q2KHM9 967 aa12.75□□□□□ -0.37
TMEM116-203ENST00000546537 TTBK2Q6IQ55 1244 aa12.75□□□□□ -0.37
TMEM116-203ENST00000546537 CHST3Q7LGC8 479 aa12.75□□□□□ -0.37
TMEM116-203ENST00000546537 IFNL3Q8IZI9 196 aa12.75□□□□□ -0.37
TMEM116-203ENST00000546537 SEPT8Q92599 483 aa12.75□□□□□ -0.37
TMEM116-203ENST00000546537 IFIH1Q9BYX4 1025 aaKnown RBP12.75□□□□□ -0.37
TMEM116-203ENST00000546537 BCL11AQ9H165 835 aa12.75□□□□□ -0.37
TMEM116-203ENST00000546537 IL17RBQ9NRM6 502 aa12.75□□□□□ -0.37
TMEM116-203ENST00000546537 CLEC1BQ9P126 229 aa12.75□□□□□ -0.37
TMEM116-203ENST00000546537 RWDD3Q9Y3V2 267 aa12.75□□□□□ -0.37
TMEM116-203ENST00000546537 GPAA1O43292 621 aa12.74□□□□□ -0.37
TMEM116-203ENST00000546537 MMP1P03956 469 aa12.74□□□□□ -0.37
TMEM116-203ENST00000546537 THPOP40225 353 aa12.74□□□□□ -0.37
TMEM116-203ENST00000546537 RRP1P56182 461 aaKnown RBP12.74□□□□□ -0.37
TMEM116-203ENST00000546537 CAMK1Q14012 370 aa12.74□□□□□ -0.37
TMEM116-203ENST00000546537 CCDC96Q2M329 555 aa12.74□□□□□ -0.37
TMEM116-203ENST00000546537 SYDE2Q5VT97 1194 aa12.74□□□□□ -0.37
TMEM116-203ENST00000546537 SEPT14Q6ZU15 432 aa12.74□□□□□ -0.37
TMEM116-203ENST00000546537 SERINC5Q86VE9 423 aa12.74□□□□□ -0.37
TMEM116-203ENST00000546537 DCAF4Q8WV16 495 aa12.74□□□□□ -0.37
TMEM116-203ENST00000546537 APPBP2Q92624 585 aa12.74□□□□□ -0.37
TMEM116-203ENST00000546537 EMID1Q96A84 441 aaPredicted RBP12.74□□□□□ -0.37
TMEM116-203ENST00000546537 IL17RAQ96F46 866 aa12.74□□□□□ -0.37
TMEM116-203ENST00000546537 RIF1Q5UIP0 2472 aaKnown RBP12.74□□□□□ -0.37
TMEM116-203ENST00000546537 KIAA1671Q9BY89 1806 aa12.74□□□□□ -0.37
TMEM116-203ENST00000546537 PATL2C9JE40 543 aaKnown RBP12.73□□□□□ -0.37
TMEM116-203ENST00000546537 NMT2O60551 498 aa12.73□□□□□ -0.37
TMEM116-203ENST00000546537 RAB11FIP3O75154 756 aa12.73□□□□□ -0.37
TMEM116-203ENST00000546537 APPP05067 770 aa12.73□□□□□ -0.37
TMEM116-203ENST00000546537 ZNF286BP0CG31 522 aa12.73□□□□□ -0.37
TMEM116-203ENST00000546537 ICAM3P32942 547 aa12.73□□□□□ -0.37
TMEM116-203ENST00000546537 NOVP48745 357 aa12.73□□□□□ -0.37
TMEM116-203ENST00000546537 DHX37Q8IY37 1157 aaKnown RBP12.73□□□□□ -0.37
TMEM116-203ENST00000546537 CLP1Q92989 425 aaKnown RBP12.73□□□□□ -0.37
TMEM116-203ENST00000546537 PHF7Q9BWX1 381 aaPredicted RBP12.73□□□□□ -0.37
TMEM116-203ENST00000546537 OSBPL7Q9BZF2 842 aa12.73□□□□□ -0.37
TMEM116-203ENST00000546537 INCENPQ9NQS7 918 aa12.73□□□□□ -0.37
TMEM116-203ENST00000546537 DDX41Q9UJV9 622 aaKnown RBP12.73□□□□□ -0.37
TMEM116-203ENST00000546537 PNMA2Q9UL42 364 aa12.73□□□□□ -0.37
TMEM116-203ENST00000546537 MTMR7Q9Y216 660 aa12.73□□□□□ -0.37
TMEM116-203ENST00000546537 VPS13AQ96RL7 3174 aa12.72□□□□□ -0.37
TMEM116-203ENST00000546537 KDM4AO75164 1064 aa12.72□□□□□ -0.37
TMEM116-203ENST00000546537 SLC3A2P08195 630 aaKnown RBP12.72□□□□□ -0.37
TMEM116-203ENST00000546537 PTPN21Q16825 1174 aa12.72□□□□□ -0.37
TMEM116-203ENST00000546537 EFHBQ8N7U6 833 aa12.72□□□□□ -0.37
TMEM116-203ENST00000546537 PPTC7Q8NI37 304 aa12.72□□□□□ -0.37
TMEM116-203ENST00000546537 PPP2R3CQ969Q6 453 aa12.72□□□□□ -0.37
TMEM116-203ENST00000546537 RPGRIP1Q96KN7 1286 aa12.72□□□□□ -0.37
TMEM116-203ENST00000546537 RIPOR3Q96MK2 946 aa12.72□□□□□ -0.37
TMEM116-203ENST00000546537 RC3H2Q9HBD1 1191 aaKnown RBP12.72□□□□□ -0.37
TMEM116-203ENST00000546537 USP15Q9Y4E8 981 aaPredicted RBP12.72□□□□□ -0.37
TMEM116-203ENST00000546537 DNAH14Q0VDD8 3507 aa12.71□□□□□ -0.37
TMEM116-203ENST00000546537 ADGRA3Q8IWK6 1321 aa12.71□□□□□ -0.37
TMEM116-203ENST00000546537 WDR19Q8NEZ3 1342 aa12.71□□□□□ -0.37
TMEM116-203ENST00000546537 TSPY2A6NKD2 308 aa12.71□□□□□ -0.37
TMEM116-203ENST00000546537 M0R2C6 588 aa12.71□□□□□ -0.37
TMEM116-203ENST00000546537 CSPG5O95196 566 aa12.71□□□□□ -0.37
TMEM116-203ENST00000546537 PDGFBP01127 241 aaPredicted RBP12.71□□□□□ -0.37
TMEM116-203ENST00000546537 HOXD8P13378 290 aaPredicted RBP12.71□□□□□ -0.37
TMEM116-203ENST00000546537 PPARAQ07869 468 aa12.71□□□□□ -0.37
TMEM116-203ENST00000546537 LAMC2Q13753 1193 aa12.71□□□□□ -0.37
TMEM116-203ENST00000546537 STXBP2Q15833 593 aa12.71□□□□□ -0.37
TMEM116-203ENST00000546537 KBTBD3Q8NAB2 608 aa12.71□□□□□ -0.37
TMEM116-203ENST00000546537 RGS22Q8NE09 1264 aa12.71□□□□□ -0.37
TMEM116-203ENST00000546537 APBB2Q92870 758 aa12.71□□□□□ -0.37
TMEM116-203ENST00000546537 PLVAPQ9BX97 442 aa12.71□□□□□ -0.37
TMEM116-203ENST00000546537 PLAGL2Q9UPG8 496 aa12.71□□□□□ -0.37
TMEM116-203ENST00000546537 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.71□□□□□ -0.37
TMEM116-203ENST00000546537 FRMPD2Q68DX3 1309 aaPredicted RBP12.7□□□□□ -0.38
TMEM116-203ENST00000546537 RNF113AO15541 343 aaKnown RBP12.7□□□□□ -0.38
TMEM116-203ENST00000546537 CAND2O75155 1236 aa12.7□□□□□ -0.38
TMEM116-203ENST00000546537 PPFIA4O75335 1185 aa12.7□□□□□ -0.38
TMEM116-203ENST00000546537 RGS20O76081 388 aa12.7□□□□□ -0.38
TMEM116-203ENST00000546537 GLP2RO95838 553 aa12.7□□□□□ -0.38
TMEM116-203ENST00000546537 ATF7P17544 494 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms