RNA–Protein interactions for RNA: ENST00000546125.1

KNTC1-215, Transcript of kinetochore associated 1, humanhuman

TSL 5

Gene KNTC1, Length 624 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-215ENST00000546125 DDX11Q96FC9 970 aa3.72□□□□□ -1.81
KNTC1-215ENST00000546125 SYT3Q9BQG1 590 aa3.72□□□□□ -1.81
KNTC1-215ENST00000546125 PHF20Q9BVI0 1012 aa3.72□□□□□ -1.81
KNTC1-215ENST00000546125 HIRIP3Q9BW71 556 aaPredicted RBP3.72□□□□□ -1.81
KNTC1-215ENST00000546125 SPATA9Q9BWV2 254 aa3.72□□□□□ -1.81
KNTC1-215ENST00000546125 ARHGEF4Q9NR80 690 aa3.72□□□□□ -1.81
KNTC1-215ENST00000546125 SCRIBQ14160 1630 aa3.72□□□□□ -1.81
KNTC1-215ENST00000546125 HGSO14964 777 aaPredicted RBP3.71□□□□□ -1.82
KNTC1-215ENST00000546125 DGKIO75912 1065 aa3.71□□□□□ -1.82
KNTC1-215ENST00000546125 FGFR1P11362 822 aa3.71□□□□□ -1.82
KNTC1-215ENST00000546125 SSRP1Q08945 709 aaKnown RBP3.71□□□□□ -1.82
KNTC1-215ENST00000546125 SMAD4Q13485 552 aaKnown RBP3.71□□□□□ -1.82
KNTC1-215ENST00000546125 TESK1Q15569 626 aa3.71□□□□□ -1.82
KNTC1-215ENST00000546125 MTERF2Q49AM1 385 aa3.71□□□□□ -1.82
KNTC1-215ENST00000546125 STEAP3Q658P3 488 aa3.71□□□□□ -1.82
KNTC1-215ENST00000546125 LILRA6Q6PI73 481 aa3.71□□□□□ -1.82
KNTC1-215ENST00000546125 ETV3LQ6ZN32 361 aa3.71□□□□□ -1.82
KNTC1-215ENST00000546125 FEZF2Q8TBJ5 459 aa3.71□□□□□ -1.82
KNTC1-215ENST00000546125 DCAF4Q8WV16 495 aa3.71□□□□□ -1.82
KNTC1-215ENST00000546125 KCNC2Q96PR1 638 aa3.71□□□□□ -1.82
KNTC1-215ENST00000546125 KCNJ15Q99712 375 aa3.71□□□□□ -1.82
KNTC1-215ENST00000546125 CDC6Q99741 560 aa3.71□□□□□ -1.82
KNTC1-215ENST00000546125 YIPF4Q9BSR8 244 aa3.71□□□□□ -1.82
KNTC1-215ENST00000546125 CCDC113Q9H0I3 377 aa3.71□□□□□ -1.82
KNTC1-215ENST00000546125 GPR27Q9NS67 375 aa3.71□□□□□ -1.82
KNTC1-215ENST00000546125 SIRPGQ9P1W8 387 aa3.71□□□□□ -1.82
KNTC1-215ENST00000546125 PPARGC1AQ9UBK2 798 aaKnown RBP3.71□□□□□ -1.82
KNTC1-215ENST00000546125 MSRB2Q9Y3D2 182 aa3.71□□□□□ -1.82
KNTC1-215ENST00000546125 NPFFR2Q9Y5X5 522 aa3.71□□□□□ -1.82
KNTC1-215ENST00000546125 OTOL1A6NHN0 477 aaPredicted RBP3.7□□□□□ -1.82
KNTC1-215ENST00000546125 DIAPH1O60610 1272 aaKnown RBP3.7□□□□□ -1.82
KNTC1-215ENST00000546125 C8BP07358 591 aa3.7□□□□□ -1.82
KNTC1-215ENST00000546125 CYP2C8P10632 490 aa3.7□□□□□ -1.82
KNTC1-215ENST00000546125 COL6A2P12110 1019 aa3.7□□□□□ -1.82
KNTC1-215ENST00000546125 STAT5AP42229 794 aa3.7□□□□□ -1.82
KNTC1-215ENST00000546125 SLC6A11P48066 632 aa3.7□□□□□ -1.82
KNTC1-215ENST00000546125 KCNC1P48547 511 aa3.7□□□□□ -1.82
KNTC1-215ENST00000546125 SLURP1P55000 103 aa3.7□□□□□ -1.82
KNTC1-215ENST00000546125 CTSWP56202 376 aa3.7□□□□□ -1.82
KNTC1-215ENST00000546125 HTRA3P83110 453 aa3.7□□□□□ -1.82
KNTC1-215ENST00000546125 RBL2Q08999 1139 aa3.7□□□□□ -1.82
KNTC1-215ENST00000546125 RASGRF1Q13972 1273 aa3.7□□□□□ -1.82
KNTC1-215ENST00000546125 CHRNA2Q15822 529 aa3.7□□□□□ -1.82
KNTC1-215ENST00000546125 NTRK3Q16288 839 aa3.7□□□□□ -1.82
KNTC1-215ENST00000546125 FAM209AQ5JX71 171 aa3.7□□□□□ -1.82
KNTC1-215ENST00000546125 NBPF6Q5VWK0 638 aa3.7□□□□□ -1.82
KNTC1-215ENST00000546125 RSPO2Q6UXX9 243 aaPredicted RBP3.7□□□□□ -1.82
KNTC1-215ENST00000546125 SAPCD2Q86UD0 394 aa3.7□□□□□ -1.82
KNTC1-215ENST00000546125 Q8N1Y9 231 aa3.7□□□□□ -1.82
KNTC1-215ENST00000546125 PMFBP1Q8TBY8 1022 aa3.7□□□□□ -1.82
KNTC1-215ENST00000546125 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.7□□□□□ -1.82
KNTC1-215ENST00000546125 ZBTB8AQ96BR9 441 aa3.7□□□□□ -1.82
KNTC1-215ENST00000546125 NBPF4Q96M43 638 aa3.7□□□□□ -1.82
KNTC1-215ENST00000546125 IPO9Q96P70 1041 aaKnown RBP3.7□□□□□ -1.82
KNTC1-215ENST00000546125 GORASP1Q9BQQ3 440 aa3.7□□□□□ -1.82
KNTC1-215ENST00000546125 EPB41L1Q9H4G0 881 aa3.7□□□□□ -1.82
KNTC1-215ENST00000546125 SPATA6Q9NWH7 488 aaPredicted RBP3.7□□□□□ -1.82
KNTC1-215ENST00000546125 KIF21AQ7Z4S6 1674 aa3.7□□□□□ -1.82
KNTC1-215ENST00000546125 KDM6BO15054 1643 aa3.7□□□□□ -1.82
KNTC1-215ENST00000546125 TOP2BQ02880 1626 aa3.7□□□□□ -1.82
KNTC1-215ENST00000546125 TCRBV5S2A0A599 114 aa3.69□□□□□ -1.82
KNTC1-215ENST00000546125 FAM221BA6H8Z2 402 aa3.69□□□□□ -1.82
KNTC1-215ENST00000546125 SMARCA5O60264 1052 aaPredicted RBP3.69□□□□□ -1.82
KNTC1-215ENST00000546125 TADA3O75528 432 aa3.69□□□□□ -1.82
KNTC1-215ENST00000546125 FAM153BP0C7A2 387 aa3.69□□□□□ -1.82
KNTC1-215ENST00000546125 SARSP49591 514 aaKnown RBP3.69□□□□□ -1.82
KNTC1-215ENST00000546125 NKX3-2P78367 333 aa3.69□□□□□ -1.82
KNTC1-215ENST00000546125 VWA3BQ502W6 1294 aa3.69□□□□□ -1.82
KNTC1-215ENST00000546125 LIPIQ6XZB0 460 aa3.69□□□□□ -1.82
KNTC1-215ENST00000546125 TTLL7Q6ZT98 887 aa3.69□□□□□ -1.82
KNTC1-215ENST00000546125 ZC3H18Q86VM9 953 aaKnown RBP3.69□□□□□ -1.82
KNTC1-215ENST00000546125 SCUBE1Q8IWY4 988 aa3.69□□□□□ -1.82
KNTC1-215ENST00000546125 FAM126BQ8IXS8 530 aa3.69□□□□□ -1.82
KNTC1-215ENST00000546125 RBM12BQ8IXT5 1001 aaKnown RBP3.69□□□□□ -1.82
KNTC1-215ENST00000546125 IFNL3Q8IZI9 196 aa3.69□□□□□ -1.82
KNTC1-215ENST00000546125 ARRDC4Q8NCT1 418 aa3.69□□□□□ -1.82
KNTC1-215ENST00000546125 ZNF669Q96BR6 464 aaPredicted RBP3.69□□□□□ -1.82
KNTC1-215ENST00000546125 C20orf173Q96LM9 149 aa3.69□□□□□ -1.82
KNTC1-215ENST00000546125 SPATA25Q9BR10 227 aa3.69□□□□□ -1.82
KNTC1-215ENST00000546125 XYLT2Q9H1B5 865 aa3.69□□□□□ -1.82
KNTC1-215ENST00000546125 CDIP1Q9H305 208 aa3.69□□□□□ -1.82
KNTC1-215ENST00000546125 SMOC1Q9H4F8 434 aa3.69□□□□□ -1.82
KNTC1-215ENST00000546125 PCDHB4Q9Y5E5 795 aa3.69□□□□□ -1.82
KNTC1-215ENST00000546125 KDM2BQ8NHM5 1336 aa3.69□□□□□ -1.82
KNTC1-215ENST00000546125 TRBV23-1A0A0A0MS06 115 aa3.68□□□□□ -1.82
KNTC1-215ENST00000546125 KRIT1O00522 736 aa3.68□□□□□ -1.82
KNTC1-215ENST00000546125 SLC27A2O14975 620 aa3.68□□□□□ -1.82
KNTC1-215ENST00000546125 ADCY3O60266 1144 aa3.68□□□□□ -1.82
KNTC1-215ENST00000546125 GPR85P60893 370 aa3.68□□□□□ -1.82
KNTC1-215ENST00000546125 CAP1Q01518 475 aa3.68□□□□□ -1.82
KNTC1-215ENST00000546125 GRIN1Q05586 938 aa3.68□□□□□ -1.82
KNTC1-215ENST00000546125 CR1LQ2VPA4 569 aa3.68□□□□□ -1.82
KNTC1-215ENST00000546125 FOXB2Q5VYV0 432 aa3.68□□□□□ -1.82
KNTC1-215ENST00000546125 LBX2Q6XYB7 198 aa3.68□□□□□ -1.82
KNTC1-215ENST00000546125 MIB1Q86YT6 1006 aa3.68□□□□□ -1.82
KNTC1-215ENST00000546125 SP8Q8IXZ3 490 aa3.68□□□□□ -1.82
KNTC1-215ENST00000546125 CARFQ8N187 725 aa3.68□□□□□ -1.82
KNTC1-215ENST00000546125 ZBTB38Q8NAP3 1195 aaPredicted RBP3.68□□□□□ -1.82
KNTC1-215ENST00000546125 PIP4K2CQ8TBX8 421 aa3.68□□□□□ -1.82
KNTC1-215ENST00000546125 TOE1Q96GM8 510 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms