RNA–Protein interactions for RNA: ENST00000546088.5

TAF1D-222, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit D, human

TSL 3

Gene TAF1D, Length 1,728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1D-222	ENST00000546088	ZNF296	Q8WUU4	475 aa	Predicted RBP	7.59	□□□□□ -1.19
TAF1D-222	ENST00000546088	STAG1	Q8WVM7	1258 aa		7.59	□□□□□ -1.19
TAF1D-222	ENST00000546088	MAP4K1	Q92918	833 aa		7.59	□□□□□ -1.19
TAF1D-222	ENST00000546088	TANGO6	Q9C0B7	1094 aa		7.59	□□□□□ -1.19
TAF1D-222	ENST00000546088	RPAP3	Q9H6T3	665 aa	Predicted RBP	7.59	□□□□□ -1.19
TAF1D-222	ENST00000546088	ZNF287	Q9HBT7	754 aa		7.59	□□□□□ -1.19
TAF1D-222	ENST00000546088	CTNNA3	Q9UI47	895 aa		7.59	□□□□□ -1.19
TAF1D-222	ENST00000546088	AGTPBP1	Q9UPW5	1226 aa		7.59	□□□□□ -1.19
TAF1D-222	ENST00000546088		E7EWF7	191 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	CA12	O43570	354 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	VCAM1	P19320	739 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	CYB5R4	Q7L1T6	521 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	ANKRD23	Q86SG2	305 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	TICAM2	Q86XR7	235 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	ANKRD13C	Q8N6S4	541 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	CD99L2	Q8TCZ2	262 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	SMCR8	Q8TEV9	937 aa	Predicted RBP	7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	P2RX7	Q99572	595 aa	Known RBP	7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	PAGR1	Q9BTK6	254 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	ARHGAP39	Q9C0H5	1083 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	ASCC2	Q9H1I8	757 aa	Predicted RBP	7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	KANSL2	Q9H9L4	492 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	ZFYVE28	Q9HCC9	887 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	FBXO28	Q9NVF7	368 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	MTMR4	Q9NYA4	1195 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	ZSWIM5	Q9P217	1185 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	PCDHGA11	Q9Y5H2	935 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	CENPF	P49454	3210 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	LOC285556	D6RIA3	1793 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	GREB1L	Q9C091	1923 aa	Predicted RBP	7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	IGKV6D-41	A0A0C4DH26	115 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	C19orf81	C9J6K1	198 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	SLC27A2	O14975	620 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	ORC4	O43929	436 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	TTLL1	O95922	423 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	CPA1	P15085	419 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	IRX3	P78415	501 aa	Predicted RBP	7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	FAM83B	Q5T0W9	1011 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	CREB3L3	Q68CJ9	461 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	TCEANC2	Q96MN5	208 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	LRRC2	Q9BYS8	371 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	KIAA1683	Q9H0B3	1180 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	VCPKMT	Q9H867	229 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	TMX2	Q9Y320	296 aa		7.58	□□□□□ -1.2
TAF1D-222	ENST00000546088	ZMYM6	O95789	1325 aa		7.57	□□□□□ -1.2
TAF1D-222	ENST00000546088	FRMPD2	Q68DX3	1309 aa	Predicted RBP	7.57	□□□□□ -1.2
TAF1D-222	ENST00000546088		F5H6K3	240 aa		7.57	□□□□□ -1.2
TAF1D-222	ENST00000546088	TLR2	O60603	784 aa		7.57	□□□□□ -1.2
TAF1D-222	ENST00000546088	NDUFB10	O96000	172 aa		7.57	□□□□□ -1.2
TAF1D-222	ENST00000546088	FGR	P09769	529 aa		7.57	□□□□□ -1.2
TAF1D-222	ENST00000546088	MCC	P23508	829 aa		7.57	□□□□□ -1.2
TAF1D-222	ENST00000546088	USP14	P54578	494 aa		7.57	□□□□□ -1.2
TAF1D-222	ENST00000546088	SNAP25	P60880	206 aa		7.57	□□□□□ -1.2
TAF1D-222	ENST00000546088	KLRC3	Q07444	240 aa		7.57	□□□□□ -1.2
TAF1D-222	ENST00000546088	IRF5	Q13568	498 aa		7.57	□□□□□ -1.2
TAF1D-222	ENST00000546088	NECTIN1	Q15223	517 aa		7.57	□□□□□ -1.2
TAF1D-222	ENST00000546088	ADCK5	Q3MIX3	580 aa		7.57	□□□□□ -1.2
TAF1D-222	ENST00000546088	KCTD1	Q719H9	257 aa		7.57	□□□□□ -1.2
TAF1D-222	ENST00000546088	ESR2	Q92731	530 aa		7.57	□□□□□ -1.2
TAF1D-222	ENST00000546088	PARK7	Q99497	189 aa	Known RBP	7.57	□□□□□ -1.2
TAF1D-222	ENST00000546088	RNF41	Q9H4P4	317 aa	Predicted RBP	7.57	□□□□□ -1.2
TAF1D-222	ENST00000546088	JPH1	Q9HDC5	661 aa	Predicted RBP	7.57	□□□□□ -1.2
TAF1D-222	ENST00000546088	TXNRD2	Q9NNW7	524 aa		7.57	□□□□□ -1.2
TAF1D-222	ENST00000546088	BRD7	Q9NPI1	651 aa		7.57	□□□□□ -1.2
TAF1D-222	ENST00000546088	GINM1	Q9NU53	330 aa		7.57	□□□□□ -1.2
TAF1D-222	ENST00000546088	PCMTD2	Q9NV79	361 aa		7.57	□□□□□ -1.2
TAF1D-222	ENST00000546088	SAGE1	Q9NXZ1	904 aa		7.57	□□□□□ -1.2
TAF1D-222	ENST00000546088	FKTN	O75072	461 aa		7.56	□□□□□ -1.2
TAF1D-222	ENST00000546088	FLOT1	O75955	427 aa		7.56	□□□□□ -1.2
TAF1D-222	ENST00000546088	CTGF	P29279	349 aa		7.56	□□□□□ -1.2
TAF1D-222	ENST00000546088	HERVK_113	P62684	666 aa		7.56	□□□□□ -1.2
TAF1D-222	ENST00000546088	SP3	Q02447	781 aa		7.56	□□□□□ -1.2
TAF1D-222	ENST00000546088	TRDN	Q13061	729 aa		7.56	□□□□□ -1.2
TAF1D-222	ENST00000546088	IK	Q13123	557 aa	Predicted RBP	7.56	□□□□□ -1.2
TAF1D-222	ENST00000546088	PLS1	Q14651	629 aa		7.56	□□□□□ -1.2
TAF1D-222	ENST00000546088	SLFN13	Q68D06	897 aa		7.56	□□□□□ -1.2
TAF1D-222	ENST00000546088	RALYL	Q86SE5	291 aa	Known RBP	7.56	□□□□□ -1.2
TAF1D-222	ENST00000546088	RAB11FIP4	Q86YS3	637 aa		7.56	□□□□□ -1.2
TAF1D-222	ENST00000546088	TMEM47	Q9BQJ4	181 aa		7.56	□□□□□ -1.2
TAF1D-222	ENST00000546088	CPVL	Q9H3G5	476 aa		7.56	□□□□□ -1.2
TAF1D-222	ENST00000546088	NYAP2	Q9P242	653 aa		7.56	□□□□□ -1.2
TAF1D-222	ENST00000546088	TNKS	O95271	1327 aa		7.56	□□□□□ -1.2
TAF1D-222	ENST00000546088	ARID1B	Q8NFD5	2236 aa	Predicted RBP	7.56	□□□□□ -1.2
TAF1D-222	ENST00000546088	USP17L15	C9J2P7	530 aa		7.55	□□□□□ -1.2
TAF1D-222	ENST00000546088	USP17L13	C9JLJ4	530 aa		7.55	□□□□□ -1.2
TAF1D-222	ENST00000546088	USP17L11	C9JVI0	530 aa		7.55	□□□□□ -1.2
TAF1D-222	ENST00000546088	USP17L18	D6R9N7	530 aa		7.55	□□□□□ -1.2
TAF1D-222	ENST00000546088	USP17L22	D6RA61	530 aa		7.55	□□□□□ -1.2
TAF1D-222	ENST00000546088	USP17L17	D6RBQ6	530 aa		7.55	□□□□□ -1.2
TAF1D-222	ENST00000546088	USP17L19	D6RCP7	530 aa		7.55	□□□□□ -1.2
TAF1D-222	ENST00000546088	USP17L20	D6RJB6	530 aa		7.55	□□□□□ -1.2
TAF1D-222	ENST00000546088	GOLGA8H	P0CJ92	632 aa		7.55	□□□□□ -1.2
TAF1D-222	ENST00000546088	TAL1	P17542	331 aa	Predicted RBP	7.55	□□□□□ -1.2
TAF1D-222	ENST00000546088	SLC16A2	P36021	539 aa		7.55	□□□□□ -1.2
TAF1D-222	ENST00000546088	ANTXR2	P58335	489 aa		7.55	□□□□□ -1.2
TAF1D-222	ENST00000546088	USP17L24	Q0WX57	530 aa		7.55	□□□□□ -1.2
TAF1D-222	ENST00000546088	PABPC4	Q13310	644 aa	Known RBP eCLIP	7.55	□□□□□ -1.2	4e-7	■■□□□ 12.3
TAF1D-222	ENST00000546088	CCDC96	Q2M329	555 aa		7.55	□□□□□ -1.2
TAF1D-222	ENST00000546088	WDR78	Q5VTH9	848 aa		7.55	□□□□□ -1.2
TAF1D-222	ENST00000546088	TTBK2	Q6IQ55	1244 aa		7.55	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms