RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 STXBP3O00186 592 aa15.64■□□□□ 0.09
SRP54-202ENST00000546080 SERPING1P05155 500 aa15.64■□□□□ 0.09
SRP54-202ENST00000546080 ERCC3P19447 782 aa15.64■□□□□ 0.09
SRP54-202ENST00000546080 LRRC63Q05C16 580 aa15.64■□□□□ 0.09
SRP54-202ENST00000546080 EHHADHQ08426 723 aa15.64■□□□□ 0.09
SRP54-202ENST00000546080 TRADDQ15628 312 aa15.64■□□□□ 0.09
SRP54-202ENST00000546080 NAB2Q15742 525 aa15.64■□□□□ 0.09
SRP54-202ENST00000546080 SFMBT2Q5VUG0 894 aa15.64■□□□□ 0.09
SRP54-202ENST00000546080 UNC13DQ70J99 1090 aa15.64■□□□□ 0.09
SRP54-202ENST00000546080 KLHL7Q8IXQ5 586 aa15.64■□□□□ 0.09
SRP54-202ENST00000546080 ZNF384Q8TF68 577 aa15.64■□□□□ 0.09
SRP54-202ENST00000546080 BARHL2Q9NY43 387 aa15.64■□□□□ 0.09
SRP54-202ENST00000546080 PACSIN2Q9UNF0 486 aaPredicted RBP15.64■□□□□ 0.09
SRP54-202ENST00000546080 GMNCA6NCL1 334 aa15.63■□□□□ 0.09
SRP54-202ENST00000546080 PREPLQ4J6C6 727 aaPredicted RBP15.63■□□□□ 0.09
SRP54-202ENST00000546080 CAVIN4Q5BKX8 364 aa15.63■□□□□ 0.09
SRP54-202ENST00000546080 GUF1Q8N442 669 aaKnown RBP15.63■□□□□ 0.09
SRP54-202ENST00000546080 USP38Q8NB14 1042 aa15.63■□□□□ 0.09
SRP54-202ENST00000546080 C3orf20Q8ND61 904 aa15.63■□□□□ 0.09
SRP54-202ENST00000546080 TAF4BQ92750 862 aa15.63■□□□□ 0.09
SRP54-202ENST00000546080 ISCUQ9H1K1 167 aa15.63■□□□□ 0.09
SRP54-202ENST00000546080 CEP72Q9P209 647 aa15.63■□□□□ 0.09
SRP54-202ENST00000546080 CEP83Q9Y592 693 aa15.63■□□□□ 0.09
SRP54-202ENST00000546080 KIF1CO43896 1103 aaKnown RBP15.63■□□□□ 0.09
SRP54-202ENST00000546080 CHRM1P11229 460 aaPredicted RBP15.63■□□□□ 0.09
SRP54-202ENST00000546080 KLRC1P26715 233 aa15.63■□□□□ 0.09
SRP54-202ENST00000546080 HSD17B3P37058 310 aa15.63■□□□□ 0.09
SRP54-202ENST00000546080 EVA1CP58658 441 aa15.63■□□□□ 0.09
SRP54-202ENST00000546080 GRM4Q14833 912 aa15.63■□□□□ 0.09
SRP54-202ENST00000546080 ARHGAP27Q6ZUM4 889 aa15.63■□□□□ 0.09
SRP54-202ENST00000546080 TSG101Q99816 390 aa15.63■□□□□ 0.09
SRP54-202ENST00000546080 ATP8A2Q9NTI2 1148 aa15.63■□□□□ 0.09
SRP54-202ENST00000546080 MAD2L2Q9UI95 211 aa15.63■□□□□ 0.09
SRP54-202ENST00000546080 MCM8Q9UJA3 840 aa15.63■□□□□ 0.09
SRP54-202ENST00000546080 PCDHGC5Q9Y5F6 944 aa15.63■□□□□ 0.09
SRP54-202ENST00000546080 MYBP10242 640 aa15.62■□□□□ 0.09
SRP54-202ENST00000546080 NF2P35240 595 aa15.62■□□□□ 0.09
SRP54-202ENST00000546080 TFAP4Q01664 338 aa15.62■□□□□ 0.09
SRP54-202ENST00000546080 NONOQ15233 471 aaKnown RBP eCLIP15.62■□□□□ 0.09
SRP54-202ENST00000546080 KRT25Q7Z3Z0 450 aa15.62■□□□□ 0.09
SRP54-202ENST00000546080 EIF1ADQ8N9N8 165 aaKnown RBP15.62■□□□□ 0.09
SRP54-202ENST00000546080 SYN2Q92777 582 aaPredicted RBP15.62■□□□□ 0.09
SRP54-202ENST00000546080 LRRC45Q96CN5 670 aa15.62■□□□□ 0.09
SRP54-202ENST00000546080 DDX20Q9UHI6 824 aaKnown RBP15.62■□□□□ 0.09
SRP54-202ENST00000546080 SUFUQ9UMX1 484 aa15.62■□□□□ 0.09
SRP54-202ENST00000546080 PVALEFA0A1B0GWK0 134 aa15.62■□□□□ 0.09
SRP54-202ENST00000546080 MYMKA6NI61 221 aa15.62■□□□□ 0.09
SRP54-202ENST00000546080 CTNNA1P35221 906 aaKnown RBP15.62■□□□□ 0.09
SRP54-202ENST00000546080 KCNMA1Q12791 1236 aa15.62■□□□□ 0.09
SRP54-202ENST00000546080 CUL1Q13616 776 aa15.62■□□□□ 0.09
SRP54-202ENST00000546080 SNCBQ16143 134 aa15.62■□□□□ 0.09
SRP54-202ENST00000546080 TMED8Q6PL24 325 aaPredicted RBP15.62■□□□□ 0.09
SRP54-202ENST00000546080 LRRC55Q6ZSA7 311 aa15.62■□□□□ 0.09
SRP54-202ENST00000546080 DYMQ7RTS9 669 aa15.62■□□□□ 0.09
SRP54-202ENST00000546080 CADPS2Q86UW7 1296 aa15.62■□□□□ 0.09
SRP54-202ENST00000546080 DGKHQ86XP1 1220 aa15.62■□□□□ 0.09
SRP54-202ENST00000546080 MMTAG2Q9BU76 263 aaKnown RBP15.62■□□□□ 0.09
SRP54-202ENST00000546080 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.62■□□□□ 0.09
SRP54-202ENST00000546080 BCCIPQ9P287 314 aaKnown RBP eCLIP15.62■□□□□ 0.09
SRP54-202ENST00000546080 MTMR7Q9Y216 660 aa15.62■□□□□ 0.09
SRP54-202ENST00000546080 TRAPPC3O43617 180 aa15.61■□□□□ 0.09
SRP54-202ENST00000546080 C21orf2O43822 256 aa15.61■□□□□ 0.09
SRP54-202ENST00000546080 PSEN1P49768 467 aa15.61■□□□□ 0.09
SRP54-202ENST00000546080 ERVK-9P63128 1117 aa15.61■□□□□ 0.09
SRP54-202ENST00000546080 BIRC3Q13489 604 aa15.61■□□□□ 0.09
SRP54-202ENST00000546080 SLC18A3Q16572 532 aa15.61■□□□□ 0.09
SRP54-202ENST00000546080 KIAA0753Q2KHM9 967 aa15.61■□□□□ 0.09
SRP54-202ENST00000546080 SLC4A8Q2Y0W8 1093 aa15.61■□□□□ 0.09
SRP54-202ENST00000546080 SBK1Q52WX2 424 aa15.61■□□□□ 0.09
SRP54-202ENST00000546080 ODF2Q5BJF6 829 aa15.61■□□□□ 0.09
SRP54-202ENST00000546080 FAM83BQ5T0W9 1011 aa15.61■□□□□ 0.09
SRP54-202ENST00000546080 RUFY4Q6ZNE9 571 aa15.61■□□□□ 0.09
SRP54-202ENST00000546080 PARP9Q8IXQ6 854 aa15.61■□□□□ 0.09
SRP54-202ENST00000546080 OR2W6PQ8NHA6 318 aa15.61■□□□□ 0.09
SRP54-202ENST00000546080 TBC1D5Q92609 795 aa15.61■□□□□ 0.09
SRP54-202ENST00000546080 NSUN4Q96CB9 384 aaKnown RBP15.61■□□□□ 0.09
SRP54-202ENST00000546080 LSM14BQ9BX40 385 aaKnown RBP15.61■□□□□ 0.09
SRP54-202ENST00000546080 SLC12A6Q9UHW9 1150 aa15.61■□□□□ 0.09
SRP54-202ENST00000546080 ATP6V0A2Q9Y487 856 aa15.61■□□□□ 0.09
SRP54-202ENST00000546080 CYTH3O43739 400 aa15.6■□□□□ 0.09
SRP54-202ENST00000546080 TLR2O60603 784 aa15.6■□□□□ 0.09
SRP54-202ENST00000546080 ADAMTS2O95450 1211 aa15.6■□□□□ 0.09
SRP54-202ENST00000546080 ELF1P32519 619 aa15.6■□□□□ 0.09
SRP54-202ENST00000546080 NAPAP54920 295 aa15.6■□□□□ 0.09
SRP54-202ENST00000546080 POLR2FP61218 127 aaKnown RBP15.6■□□□□ 0.09
SRP54-202ENST00000546080 MECOMQ03112 1051 aa15.6■□□□□ 0.09
SRP54-202ENST00000546080 UBE4AQ14139 1066 aa15.6■□□□□ 0.09
SRP54-202ENST00000546080 NEK8Q86SG6 692 aa15.6■□□□□ 0.09
SRP54-202ENST00000546080 CCDC50Q8IVM0 306 aa15.6■□□□□ 0.09
SRP54-202ENST00000546080 LARP4BQ92615 738 aaKnown RBP15.6■□□□□ 0.09
SRP54-202ENST00000546080 CDK5RAP3Q96JB5 506 aa15.6■□□□□ 0.09
SRP54-202ENST00000546080 STK17AQ9UEE5 414 aa15.6■□□□□ 0.09
SRP54-202ENST00000546080 TMEM59LQ9UK28 342 aa15.6■□□□□ 0.09
SRP54-202ENST00000546080 ITGB4P16144 1822 aa15.6■□□□□ 0.09
SRP54-202ENST00000546080 H0YGN5 161 aa15.6■□□□□ 0.09
SRP54-202ENST00000546080 CES2O00748 559 aa15.6■□□□□ 0.09
SRP54-202ENST00000546080 KCNK3O14649 394 aa15.6■□□□□ 0.09
SRP54-202ENST00000546080 PPARDQ03181 441 aa15.6■□□□□ 0.09
SRP54-202ENST00000546080 ZNF844Q08AG5 666 aa15.6■□□□□ 0.09
SRP54-202ENST00000546080 GRB10Q13322 594 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms