RNA–Protein interactions for RNA: ENST00000545621.5

HMBS-222, Transcript of hydroxymethylbilane synthase, human

TSL 1 (best)

Gene HMBS, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMBS-222	ENST00000545621	CDK7	P50613	346 aa		18.31	■□□□□ 0.52
HMBS-222	ENST00000545621	ATN1	P54259	1190 aa	Predicted RBP	18.31	■□□□□ 0.52
HMBS-222	ENST00000545621	PURA	Q00577	322 aa	Known RBP	18.31	■□□□□ 0.52
HMBS-222	ENST00000545621	MYSM1	Q5VVJ2	828 aa		18.31	■□□□□ 0.52
HMBS-222	ENST00000545621	REXO1	Q8N1G1	1221 aa	Known RBP	18.31	■□□□□ 0.52
HMBS-222	ENST00000545621	SLC43A3	Q8NBI5	491 aa		18.31	■□□□□ 0.52
HMBS-222	ENST00000545621	NSUN7	Q8NE18	718 aa	Known RBP	18.31	■□□□□ 0.52
HMBS-222	ENST00000545621	BICD2	Q8TD16	824 aa		18.31	■□□□□ 0.52
HMBS-222	ENST00000545621	GPRASP2	Q96D09	838 aa		18.31	■□□□□ 0.52
HMBS-222	ENST00000545621	ZFP91	Q96JP5	570 aa	Predicted RBP	18.31	■□□□□ 0.52
HMBS-222	ENST00000545621	SENP7	Q9BQF6	1050 aa		18.31	■□□□□ 0.52
HMBS-222	ENST00000545621	STARD7	Q9NQZ5	370 aa		18.31	■□□□□ 0.52
HMBS-222	ENST00000545621	TMEM260	Q9NX78	707 aa		18.31	■□□□□ 0.52
HMBS-222	ENST00000545621	NR2E3	Q9Y5X4	410 aa		18.31	■□□□□ 0.52
HMBS-222	ENST00000545621	RANBP2	P49792	3224 aa	Known RBP	18.3	■□□□□ 0.52
HMBS-222	ENST00000545621		M0R2N6	131 aa		18.3	■□□□□ 0.52
HMBS-222	ENST00000545621	FDPS	P14324	419 aa	Known RBP	18.3	■□□□□ 0.52
HMBS-222	ENST00000545621	ITGB5	P18084	799 aa		18.3	■□□□□ 0.52
HMBS-222	ENST00000545621	UBA1	P22314	1058 aa	Known RBP	18.3	■□□□□ 0.52
HMBS-222	ENST00000545621	RTP1	P59025	263 aa		18.3	■□□□□ 0.52
HMBS-222	ENST00000545621	LAMC2	Q13753	1193 aa		18.3	■□□□□ 0.52
HMBS-222	ENST00000545621	CELF3	Q5SZQ8	465 aa	Known RBP	18.3	■□□□□ 0.52
HMBS-222	ENST00000545621	GALNT17	Q6IS24	598 aa		18.3	■□□□□ 0.52
HMBS-222	ENST00000545621	CXCL17	Q6UXB2	119 aa		18.3	■□□□□ 0.52
HMBS-222	ENST00000545621	ANKRD33	Q7Z3H0	272 aa		18.3	■□□□□ 0.52
HMBS-222	ENST00000545621	DAGLB	Q8NCG7	672 aa		18.3	■□□□□ 0.52
HMBS-222	ENST00000545621	AIFM3	Q96NN9	605 aa		18.3	■□□□□ 0.52
HMBS-222	ENST00000545621	POLR3E	Q9NVU0	708 aa		18.3	■□□□□ 0.52
HMBS-222	ENST00000545621	RTEL1	Q9NZ71	1219 aa		18.3	■□□□□ 0.52
HMBS-222	ENST00000545621	MAFG	O15525	162 aa		18.29	■□□□□ 0.52
HMBS-222	ENST00000545621	KPNA6	O60684	536 aa		18.29	■□□□□ 0.52
HMBS-222	ENST00000545621	MMP3	P08254	477 aa		18.29	■□□□□ 0.52
HMBS-222	ENST00000545621	CYP3A4	P08684	503 aa		18.29	■□□□□ 0.52
HMBS-222	ENST00000545621	BRDT	Q58F21	947 aa	Predicted RBP	18.29	■□□□□ 0.52
HMBS-222	ENST00000545621	PPTC7	Q8NI37	304 aa		18.29	■□□□□ 0.52
HMBS-222	ENST00000545621	AFG1L	Q8WV93	481 aa		18.29	■□□□□ 0.52
HMBS-222	ENST00000545621	PGBD1	Q96JS3	809 aa		18.29	■□□□□ 0.52
HMBS-222	ENST00000545621	ZSCAN31	Q96LW9	406 aa	Predicted RBP	18.29	■□□□□ 0.52
HMBS-222	ENST00000545621	TOX2	Q96NM4	488 aa		18.29	■□□□□ 0.52
HMBS-222	ENST00000545621	JADE2	Q9NQC1	790 aa		18.29	■□□□□ 0.52
HMBS-222	ENST00000545621	SH2B1	Q9NRF2	756 aa	Predicted RBP	18.29	■□□□□ 0.52
HMBS-222	ENST00000545621	ORC3	Q9UBD5	711 aa	Predicted RBP	18.29	■□□□□ 0.52
HMBS-222	ENST00000545621	PCDHA4	Q9UN74	947 aa		18.29	■□□□□ 0.52
HMBS-222	ENST00000545621	GRIN2D	O15399	1336 aa		18.28	■□□□□ 0.52
HMBS-222	ENST00000545621		A0A0U1RQG5	324 aa	Predicted RBP	18.28	■□□□□ 0.52
HMBS-222	ENST00000545621		H0YGN5	161 aa		18.28	■□□□□ 0.52
HMBS-222	ENST00000545621	TRIM60	Q495X7	471 aa		18.28	■□□□□ 0.52
HMBS-222	ENST00000545621	JAKMIP3	Q5VZ66	844 aa		18.28	■□□□□ 0.52
HMBS-222	ENST00000545621	NLRX1	Q86UT6	975 aa		18.28	■□□□□ 0.52
HMBS-222	ENST00000545621	DHX37	Q8IY37	1157 aa	Known RBP	18.28	■□□□□ 0.52
HMBS-222	ENST00000545621	C7orf61	Q8IZ16	206 aa		18.28	■□□□□ 0.52
HMBS-222	ENST00000545621	CDHR1	Q96JP9	859 aa		18.28	■□□□□ 0.52
HMBS-222	ENST00000545621	MXRA8	Q9BRK3	442 aa		18.28	■□□□□ 0.52
HMBS-222	ENST00000545621	PHF20	Q9BVI0	1012 aa		18.28	■□□□□ 0.52
HMBS-222	ENST00000545621	SEZ6L	Q9BYH1	1024 aa		18.28	■□□□□ 0.52
HMBS-222	ENST00000545621	TANC1	Q9C0D5	1861 aa		18.28	■□□□□ 0.52
HMBS-222	ENST00000545621	ARVCF	O00192	962 aa		18.27	■□□□□ 0.52
HMBS-222	ENST00000545621	MEIS1	O00470	390 aa		18.27	■□□□□ 0.52
HMBS-222	ENST00000545621	GGPS1	O95749	300 aa		18.27	■□□□□ 0.52
HMBS-222	ENST00000545621	KCNA2	P16389	499 aa		18.27	■□□□□ 0.52
HMBS-222	ENST00000545621	NLRP5	P59047	1200 aa		18.27	■□□□□ 0.52
HMBS-222	ENST00000545621	ARHGAP4	P98171	946 aa		18.27	■□□□□ 0.52
HMBS-222	ENST00000545621	NEDD9	Q14511	834 aa		18.27	■□□□□ 0.52
HMBS-222	ENST00000545621	HSDL1	Q3SXM5	330 aa		18.27	■□□□□ 0.52
HMBS-222	ENST00000545621	METTL7B	Q6UX53	244 aa		18.27	■□□□□ 0.52
HMBS-222	ENST00000545621	NIPA1	Q7RTP0	329 aa		18.27	■□□□□ 0.52
HMBS-222	ENST00000545621	MTG1	Q9BT17	334 aa	Predicted RBP	18.27	■□□□□ 0.52
HMBS-222	ENST00000545621	MROH7	Q68CQ1	1323 aa		18.26	■□□□□ 0.51
HMBS-222	ENST00000545621	EDIL3	O43854	480 aa		18.26	■□□□□ 0.51
HMBS-222	ENST00000545621	ST18	O60284	1047 aa		18.26	■□□□□ 0.51
HMBS-222	ENST00000545621	TLE2	Q04725	743 aa		18.26	■□□□□ 0.51
HMBS-222	ENST00000545621	MTMR1	Q13613	665 aa		18.26	■□□□□ 0.51
HMBS-222	ENST00000545621	CEP55	Q53EZ4	464 aa		18.26	■□□□□ 0.51
HMBS-222	ENST00000545621	BLID	Q8IZY5	108 aa		18.26	■□□□□ 0.51
HMBS-222	ENST00000545621	CYP2W1	Q8TAV3	490 aa		18.26	■□□□□ 0.51
HMBS-222	ENST00000545621	RASGRP4	Q8TDF6	673 aa		18.26	■□□□□ 0.51
HMBS-222	ENST00000545621	WASF1	Q92558	559 aa		18.26	■□□□□ 0.51
HMBS-222	ENST00000545621	LLPH	Q9BRT6	129 aa	Known RBP	18.26	■□□□□ 0.51
HMBS-222	ENST00000545621	BCAS3	Q9H6U6	928 aa		18.26	■□□□□ 0.51
HMBS-222	ENST00000545621	ATP11B	Q9Y2G3	1177 aa		18.26	■□□□□ 0.51
HMBS-222	ENST00000545621	IGLV3-22	A0A075B6J6	115 aa		18.25	■□□□□ 0.51
HMBS-222	ENST00000545621	FAM86B1	E9PN63	330 aa		18.25	■□□□□ 0.51
HMBS-222	ENST00000545621	JAK2	O60674	1132 aa		18.25	■□□□□ 0.51
HMBS-222	ENST00000545621	DTNB	O60941	627 aa		18.25	■□□□□ 0.51
HMBS-222	ENST00000545621	ATP9A	O75110	1047 aa		18.25	■□□□□ 0.51
HMBS-222	ENST00000545621	PPFIA4	O75335	1185 aa		18.25	■□□□□ 0.51
HMBS-222	ENST00000545621	CD2BP2	O95400	341 aa	Known RBP	18.25	■□□□□ 0.51
HMBS-222	ENST00000545621	FAM86B2	P0C5J1	330 aa		18.25	■□□□□ 0.51
HMBS-222	ENST00000545621	CIITA	P33076	1130 aa		18.25	■□□□□ 0.51
HMBS-222	ENST00000545621	ITGA7	Q13683	1181 aa		18.25	■□□□□ 0.51
HMBS-222	ENST00000545621	DGKD	Q16760	1214 aa		18.25	■□□□□ 0.51
HMBS-222	ENST00000545621	FAM126B	Q8IXS8	530 aa		18.25	■□□□□ 0.51
HMBS-222	ENST00000545621	GIMAP8	Q8ND71	665 aa	Predicted RBP	18.25	■□□□□ 0.51
HMBS-222	ENST00000545621	KAT2B	Q92831	832 aa		18.25	■□□□□ 0.51
HMBS-222	ENST00000545621	PDLIM7	Q9NR12	457 aa		18.25	■□□□□ 0.51
HMBS-222	ENST00000545621	KCNH7	Q9NS40	1196 aa		18.25	■□□□□ 0.51
HMBS-222	ENST00000545621	TRIOBP	Q9H2D6	2365 aa		18.25	■□□□□ 0.51
HMBS-222	ENST00000545621	SCN5A	Q14524	2016 aa		18.25	■□□□□ 0.51
HMBS-222	ENST00000545621	EVPL	Q92817	2033 aa		18.24	■□□□□ 0.51
HMBS-222	ENST00000545621	F2	P00734	622 aa		18.24	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms