RNA–Protein interactions for RNA: ENST00000545484.1

CCND1-206, Transcript of cyclin D1, humanhuman

TSL 5

Gene CCND1, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-206ENST00000545484 SPATA33Q96N06 139 aa24.73■■□□□ 1.55
CCND1-206ENST00000545484 INPP4AQ96PE3 977 aaPredicted RBP24.73■■□□□ 1.55
CCND1-206ENST00000545484 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.73■■□□□ 1.552e-6■■□□□ 12.4
CCND1-206ENST00000545484 FAM217BQ9NTX9 383 aaPredicted RBP24.73■■□□□ 1.55
CCND1-206ENST00000545484 V9GY48 417 aaPredicted RBP24.73■■□□□ 1.55
CCND1-206ENST00000545484 ACRP10323 421 aa24.72■■□□□ 1.55
CCND1-206ENST00000545484 NAPAP54920 295 aa24.72■■□□□ 1.55
CCND1-206ENST00000545484 PTPN11Q06124 597 aaPredicted RBP24.72■■□□□ 1.55
CCND1-206ENST00000545484 HSDL1Q3SXM5 330 aa24.72■■□□□ 1.55
CCND1-206ENST00000545484 MLXIPQ9HAP2 919 aa24.72■■□□□ 1.55
CCND1-206ENST00000545484 NOD1Q9Y239 953 aa24.72■■□□□ 1.55
CCND1-206ENST00000545484 TANC1Q9C0D5 1861 aa24.71■■□□□ 1.55
CCND1-206ENST00000545484 SPDYE3A6NKU9 549 aa24.71■■□□□ 1.55
CCND1-206ENST00000545484 FIBPO43427 364 aa24.71■■□□□ 1.55
CCND1-206ENST00000545484 EPB41L2O43491 1005 aaKnown RBP24.71■■□□□ 1.55
CCND1-206ENST00000545484 XRRA1Q6P2D8 792 aa24.71■■□□□ 1.55
CCND1-206ENST00000545484 KATNAL1Q9BW62 490 aa24.71■■□□□ 1.55
CCND1-206ENST00000545484 WNT8AQ9H1J5 351 aa24.71■■□□□ 1.55
CCND1-206ENST00000545484 CCDC196A0A1B0GTZ2 297 aa24.7■■□□□ 1.54
CCND1-206ENST00000545484 ICAM3P32942 547 aa24.7■■□□□ 1.54
CCND1-206ENST00000545484 TMEM240Q5SV17 173 aa24.7■■□□□ 1.54
CCND1-206ENST00000545484 PSRC1Q6PGN9 363 aaPredicted RBP24.7■■□□□ 1.54
CCND1-206ENST00000545484 C16orf59Q7L2K0 433 aa24.7■■□□□ 1.54
CCND1-206ENST00000545484 IL23AQ9NPF7 189 aa24.7■■□□□ 1.54
CCND1-206ENST00000545484 SPATA31C2B4DYI2 1134 aa24.69■■□□□ 1.54
CCND1-206ENST00000545484 F2P00734 622 aa24.69■■□□□ 1.54
CCND1-206ENST00000545484 ADD1P35611 737 aaKnown RBP24.69■■□□□ 1.54
CCND1-206ENST00000545484 PSEN2P49810 448 aa24.69■■□□□ 1.54
CCND1-206ENST00000545484 SEMA3FQ13275 785 aa24.69■■□□□ 1.54
CCND1-206ENST00000545484 TYW1BQ6NUM6 668 aa24.69■■□□□ 1.54
CCND1-206ENST00000545484 PPP1R18Q6NYC8 613 aa24.69■■□□□ 1.54
CCND1-206ENST00000545484 ZNF365Q70YC5 407 aa24.69■■□□□ 1.54
CCND1-206ENST00000545484 SCLYQ96I15 445 aa24.69■■□□□ 1.54
CCND1-206ENST00000545484 ALG1Q9BT22 464 aa24.69■■□□□ 1.54
CCND1-206ENST00000545484 USP26Q9BXU7 913 aa24.69■■□□□ 1.54
CCND1-206ENST00000545484 SCN5AQ14524 2016 aa24.69■■□□□ 1.54
CCND1-206ENST00000545484 hCG_1984214I3L0E3 225 aa24.68■■□□□ 1.54
CCND1-206ENST00000545484 STXBP3O00186 592 aa24.68■■□□□ 1.54
CCND1-206ENST00000545484 PPFIA4O75335 1185 aa24.68■■□□□ 1.54
CCND1-206ENST00000545484 HOXD8P13378 290 aaPredicted RBP24.68■■□□□ 1.54
CCND1-206ENST00000545484 SMAD3P84022 425 aaKnown RBP24.68■■□□□ 1.54
CCND1-206ENST00000545484 NEDD9Q14511 834 aa24.68■■□□□ 1.54
CCND1-206ENST00000545484 MFSD10Q14728 455 aa24.68■■□□□ 1.54
CCND1-206ENST00000545484 PTGISQ16647 500 aa24.68■■□□□ 1.54
CCND1-206ENST00000545484 KIAA0753Q2KHM9 967 aa24.68■■□□□ 1.54
CCND1-206ENST00000545484 NLRX1Q86UT6 975 aa24.68■■□□□ 1.54
CCND1-206ENST00000545484 SESTD1Q86VW0 696 aa24.68■■□□□ 1.54
CCND1-206ENST00000545484 FBXL16Q8N461 479 aa24.68■■□□□ 1.54
CCND1-206ENST00000545484 ZNF713Q8N859 430 aaPredicted RBP24.68■■□□□ 1.54
CCND1-206ENST00000545484 C7orf31Q8N865 590 aa24.68■■□□□ 1.54
CCND1-206ENST00000545484 AGXT2Q9BYV1 514 aa24.68■■□□□ 1.54
CCND1-206ENST00000545484 BCAS3Q9H6U6 928 aa24.68■■□□□ 1.54
CCND1-206ENST00000545484 PCDHA6Q9UN73 950 aa24.68■■□□□ 1.54
CCND1-206ENST00000545484 PCDHA8Q9Y5H6 950 aa24.68■■□□□ 1.54
CCND1-206ENST00000545484 NID2Q14112 1375 aa24.67■■□□□ 1.54
CCND1-206ENST00000545484 NOP56O00567 594 aaKnown RBP24.67■■□□□ 1.54
CCND1-206ENST00000545484 ADCY7P51828 1080 aa24.67■■□□□ 1.54
CCND1-206ENST00000545484 GDF6Q6KF10 455 aaPredicted RBP24.67■■□□□ 1.54
CCND1-206ENST00000545484 METTL7BQ6UX53 244 aa24.67■■□□□ 1.54
CCND1-206ENST00000545484 RUFY3Q7L099 469 aa24.67■■□□□ 1.54
CCND1-206ENST00000545484 CYFIP1Q7L576 1253 aa24.67■■□□□ 1.54
CCND1-206ENST00000545484 EHMT1Q9H9B1 1298 aa24.67■■□□□ 1.54
CCND1-206ENST00000545484 RIC8AQ9NPQ8 531 aa24.67■■□□□ 1.54
CCND1-206ENST00000545484 BARHL2Q9NY43 387 aa24.67■■□□□ 1.54
CCND1-206ENST00000545484 LAMA2P24043 3122 aaKnown RBP24.67■■□□□ 1.54
CCND1-206ENST00000545484 TRIP12Q14669 1992 aaPredicted RBP24.67■■□□□ 1.54
CCND1-206ENST00000545484 ZNF697Q5TEC3 545 aa24.66■■□□□ 1.54
CCND1-206ENST00000545484 FAM161BQ96MY7 647 aa24.66■■□□□ 1.54
CCND1-206ENST00000545484 MTMR10Q9NXD2 777 aa24.66■■□□□ 1.54
CCND1-206ENST00000545484 HDAC6Q9UBN7 1215 aa24.66■■□□□ 1.54
CCND1-206ENST00000545484 GTF2IRD1Q9UHL9 959 aa24.66■■□□□ 1.54
CCND1-206ENST00000545484 HAS3O00219 553 aa24.65■■□□□ 1.54
CCND1-206ENST00000545484 SP4Q02446 784 aa24.65■■□□□ 1.54
CCND1-206ENST00000545484 FAM109BQ6ICB4 259 aaPredicted RBP24.65■■□□□ 1.54
CCND1-206ENST00000545484 GPRASP2Q96D09 838 aa24.65■■□□□ 1.54
CCND1-206ENST00000545484 ZSWIM6Q9HCJ5 1215 aa24.65■■□□□ 1.54
CCND1-206ENST00000545484 CYP46A1Q9Y6A2 500 aa24.65■■□□□ 1.54
CCND1-206ENST00000545484 SMCO2A6NFE2 343 aa24.64■■□□□ 1.54
CCND1-206ENST00000545484 PITPNM1O00562 1244 aa24.64■■□□□ 1.54
CCND1-206ENST00000545484 FGBP02675 491 aa24.64■■□□□ 1.54
CCND1-206ENST00000545484 SCG2P13521 617 aa24.64■■□□□ 1.54
CCND1-206ENST00000545484 ITGB5P18084 799 aa24.64■■□□□ 1.54
CCND1-206ENST00000545484 BFSP2Q13515 415 aa24.64■■□□□ 1.54
CCND1-206ENST00000545484 PFKFB3Q16875 520 aaPredicted RBP24.64■■□□□ 1.54
CCND1-206ENST00000545484 OTOP2Q7RTS6 562 aa24.64■■□□□ 1.54
CCND1-206ENST00000545484 RPUSD2Q8IZ73 545 aaKnown RBP24.64■■□□□ 1.54
CCND1-206ENST00000545484 RETREG2Q8NC44 543 aa24.64■■□□□ 1.54
CCND1-206ENST00000545484 CDHR1Q96JP9 859 aa24.64■■□□□ 1.54
CCND1-206ENST00000545484 PGBD1Q96JS3 809 aa24.64■■□□□ 1.54
CCND1-206ENST00000545484 CTAGE1Q96RT6 745 aa24.64■■□□□ 1.54
CCND1-206ENST00000545484 C16orf70Q9BSU1 422 aa24.64■■□□□ 1.54
CCND1-206ENST00000545484 UPF3BQ9BZI7 483 aaKnown RBP24.64■■□□□ 1.54
CCND1-206ENST00000545484 MTIF3Q9H2K0 278 aaKnown RBP24.64■■□□□ 1.54
CCND1-206ENST00000545484 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.63■■□□□ 1.53
CCND1-206ENST00000545484 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.63■■□□□ 1.53
CCND1-206ENST00000545484 LGALS2P05162 132 aa24.63■■□□□ 1.53
CCND1-206ENST00000545484 CCT2P78371 535 aaKnown RBP24.63■■□□□ 1.53
CCND1-206ENST00000545484 MTMR1Q13613 665 aa24.63■■□□□ 1.53
CCND1-206ENST00000545484 TOB2Q14106 344 aaPredicted RBP24.63■■□□□ 1.53
CCND1-206ENST00000545484 RASIP1Q5U651 963 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms