RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 MEN1O00255 615 aa9.01□□□□□ -0.97
SNHG1-223ENST00000545440 PDHBP11177 359 aa9.01□□□□□ -0.97
SNHG1-223ENST00000545440 CNGA1P29973 690 aa9.01□□□□□ -0.97
SNHG1-223ENST00000545440 CCDC96Q2M329 555 aa9.01□□□□□ -0.97
SNHG1-223ENST00000545440 TKFCQ3LXA3 575 aa9.01□□□□□ -0.97
SNHG1-223ENST00000545440 CCDC178Q5BJE1 867 aa9.01□□□□□ -0.97
SNHG1-223ENST00000545440 MAMDC4Q6UXC1 1216 aa9.01□□□□□ -0.97
SNHG1-223ENST00000545440 BTNL9Q6UXG8 535 aa9.01□□□□□ -0.97
SNHG1-223ENST00000545440 KCTD1Q719H9 257 aa9.01□□□□□ -0.97
SNHG1-223ENST00000545440 RASGRP2Q7LDG7 609 aa9.01□□□□□ -0.97
SNHG1-223ENST00000545440 IQCA1Q86XH1 822 aa9.01□□□□□ -0.97
SNHG1-223ENST00000545440 TSEN2Q8NCE0 465 aaKnown RBP9.01□□□□□ -0.97
SNHG1-223ENST00000545440 RUFY2Q8WXA3 655 aa9.01□□□□□ -0.97
SNHG1-223ENST00000545440 TINF2Q9BSI4 451 aa9.01□□□□□ -0.97
SNHG1-223ENST00000545440 TSEN34Q9BSV6 310 aaKnown RBP9.01□□□□□ -0.97
SNHG1-223ENST00000545440 IL25Q9H293 177 aa9.01□□□□□ -0.97
SNHG1-223ENST00000545440 ACAD9Q9H845 621 aa9.01□□□□□ -0.97
SNHG1-223ENST00000545440 CNNM2Q9H8M5 875 aa9.01□□□□□ -0.97
SNHG1-223ENST00000545440 PRR12Q9ULL5 1215 aa9.01□□□□□ -0.97
SNHG1-223ENST00000545440 SNHG28P0DPA3 235 aa9□□□□□ -0.97
SNHG1-223ENST00000545440 SMPD1P17405 629 aa9□□□□□ -0.97
SNHG1-223ENST00000545440 CHMLP26374 656 aa9□□□□□ -0.97
SNHG1-223ENST00000545440 PTGIRP43119 386 aa9□□□□□ -0.97
SNHG1-223ENST00000545440 TLR1Q15399 786 aa9□□□□□ -0.97
SNHG1-223ENST00000545440 Q6ZVU0 165 aa9□□□□□ -0.97
SNHG1-223ENST00000545440 DGKHQ86XP1 1220 aa9□□□□□ -0.97
SNHG1-223ENST00000545440 ANKRD35Q8N283 1001 aa9□□□□□ -0.97
SNHG1-223ENST00000545440 DDX11Q96FC9 970 aa9□□□□□ -0.97
SNHG1-223ENST00000545440 ESYT1Q9BSJ8 1104 aa9□□□□□ -0.97
SNHG1-223ENST00000545440 KRT23Q9C075 422 aa9□□□□□ -0.97
SNHG1-223ENST00000545440 RANBP17Q9H2T7 1088 aaKnown RBP9□□□□□ -0.97
SNHG1-223ENST00000545440 RNF146Q9NTX7 359 aa9□□□□□ -0.97
SNHG1-223ENST00000545440 CNPY2Q9Y2B0 182 aa9□□□□□ -0.97
SNHG1-223ENST00000545440 B4E1Z4 1266 aa8.99□□□□□ -0.97
SNHG1-223ENST00000545440 CAPN5O15484 640 aaPredicted RBP8.99□□□□□ -0.97
SNHG1-223ENST00000545440 ICAM1P05362 532 aa8.99□□□□□ -0.97
SNHG1-223ENST00000545440 RARBP10826 455 aa8.99□□□□□ -0.97
SNHG1-223ENST00000545440 AKR1A1P14550 325 aa8.99□□□□□ -0.97
SNHG1-223ENST00000545440 ADD1P35611 737 aaKnown RBP8.99□□□□□ -0.97
SNHG1-223ENST00000545440 RELBQ01201 579 aa8.99□□□□□ -0.97
SNHG1-223ENST00000545440 ZNF543Q08ER8 600 aa8.99□□□□□ -0.97
SNHG1-223ENST00000545440 CBLBQ13191 982 aa8.99□□□□□ -0.97
SNHG1-223ENST00000545440 CLN3Q13286 438 aa8.99□□□□□ -0.97
SNHG1-223ENST00000545440 HABP4Q5JVS0 413 aaKnown RBP8.99□□□□□ -0.97
SNHG1-223ENST00000545440 GPATCH4Q5T3I0 446 aaKnown RBP8.99□□□□□ -0.97
SNHG1-223ENST00000545440 SYDE2Q5VT97 1194 aa8.99□□□□□ -0.97
SNHG1-223ENST00000545440 ARRDC4Q8NCT1 418 aa8.99□□□□□ -0.97
SNHG1-223ENST00000545440 ANKS1AQ92625 1134 aa8.99□□□□□ -0.97
SNHG1-223ENST00000545440 PRIMPOLQ96LW4 560 aa8.99□□□□□ -0.97
SNHG1-223ENST00000545440 FGD4Q96M96 766 aa8.99□□□□□ -0.97
SNHG1-223ENST00000545440 ZSCAN10Q96SZ4 725 aaPredicted RBP8.99□□□□□ -0.97
SNHG1-223ENST00000545440 ETNK1Q9HBU6 452 aa8.99□□□□□ -0.97
SNHG1-223ENST00000545440 A1CFQ9NQ94 594 aaKnown RBP8.99□□□□□ -0.97
SNHG1-223ENST00000545440 RAB6BQ9NRW1 208 aa8.99□□□□□ -0.97
SNHG1-223ENST00000545440 HOMER2Q9NSB8 354 aa8.99□□□□□ -0.97
SNHG1-223ENST00000545440 PNMA2Q9UL42 364 aa8.99□□□□□ -0.97
SNHG1-223ENST00000545440 CCPG1Q9ULG6 757 aa8.99□□□□□ -0.97
SNHG1-223ENST00000545440 TNKSO95271 1327 aa8.99□□□□□ -0.97
SNHG1-223ENST00000545440 FRMPD2Q68DX3 1309 aaPredicted RBP8.99□□□□□ -0.97
SNHG1-223ENST00000545440 WDR19Q8NEZ3 1342 aa8.99□□□□□ -0.97
SNHG1-223ENST00000545440 RANBP2P49792 3224 aaKnown RBP8.99□□□□□ -0.97
SNHG1-223ENST00000545440 DNAH12Q6ZR08 3092 aa8.99□□□□□ -0.97
SNHG1-223ENST00000545440 A0A1W2PPC1 479 aa8.98□□□□□ -0.97
SNHG1-223ENST00000545440 A0A1W2PRU2 124 aa8.98□□□□□ -0.97
SNHG1-223ENST00000545440 TMEM229AB2RXF0 380 aa8.98□□□□□ -0.97
SNHG1-223ENST00000545440 KBTBD13C9JR72 458 aa8.98□□□□□ -0.97
SNHG1-223ENST00000545440 SGSM2O43147 1006 aa8.98□□□□□ -0.97
SNHG1-223ENST00000545440 ZNF865P0CJ78 1059 aaPredicted RBP8.98□□□□□ -0.97
SNHG1-223ENST00000545440 ALAS1P13196 640 aa8.98□□□□□ -0.97
SNHG1-223ENST00000545440 TIMP2P16035 220 aa8.98□□□□□ -0.97
SNHG1-223ENST00000545440 SMTNP53814 917 aa8.98□□□□□ -0.97
SNHG1-223ENST00000545440 PRAMEF19Q5SWL8 479 aa8.98□□□□□ -0.97
SNHG1-223ENST00000545440 TMCO4Q5TGY1 634 aa8.98□□□□□ -0.97
SNHG1-223ENST00000545440 CCDC174Q6PII3 467 aa8.98□□□□□ -0.97
SNHG1-223ENST00000545440 CENPQQ7L2Z9 268 aaPredicted RBP8.98□□□□□ -0.97
SNHG1-223ENST00000545440 C7orf61Q8IZ16 206 aa8.98□□□□□ -0.97
SNHG1-223ENST00000545440 ENAHQ8N8S7 591 aaPredicted RBP8.98□□□□□ -0.97
SNHG1-223ENST00000545440 FAM133AQ8N9E0 248 aa8.98□□□□□ -0.97
SNHG1-223ENST00000545440 C1orf216Q8TAB5 229 aa8.98□□□□□ -0.97
SNHG1-223ENST00000545440 SCG3Q8WXD2 468 aaKnown RBP8.98□□□□□ -0.97
SNHG1-223ENST00000545440 CHMP4CQ96CF2 233 aa8.98□□□□□ -0.97
SNHG1-223ENST00000545440 AGBL1Q96MI9 1066 aa8.98□□□□□ -0.97
SNHG1-223ENST00000545440 TRERF1Q96PN7 1200 aa8.98□□□□□ -0.97
SNHG1-223ENST00000545440 UBAC1Q9BSL1 405 aa8.98□□□□□ -0.97
SNHG1-223ENST00000545440 GZF1Q9H116 711 aaPredicted RBP8.98□□□□□ -0.97
SNHG1-223ENST00000545440 PRO3102Q9H379 93 aa8.98□□□□□ -0.97
SNHG1-223ENST00000545440 ZFAND3Q9H8U3 227 aa8.98□□□□□ -0.97
SNHG1-223ENST00000545440 XPNPEP3Q9NQH7 507 aa8.98□□□□□ -0.97
SNHG1-223ENST00000545440 SCN10AQ9Y5Y9 1956 aa8.98□□□□□ -0.97
SNHG1-223ENST00000545440 TANC1Q9C0D5 1861 aa8.98□□□□□ -0.97
SNHG1-223ENST00000545440 FAM187AA6NFU0 413 aa8.97□□□□□ -0.97
SNHG1-223ENST00000545440 A6NJY4 79 aa8.97□□□□□ -0.97
SNHG1-223ENST00000545440 DKK1O94907 266 aa8.97□□□□□ -0.97
SNHG1-223ENST00000545440 SNAI1O95863 264 aaPredicted RBP8.97□□□□□ -0.97
SNHG1-223ENST00000545440 TAL1P17542 331 aaPredicted RBP8.97□□□□□ -0.97
SNHG1-223ENST00000545440 IGFBP4P22692 258 aa8.97□□□□□ -0.97
SNHG1-223ENST00000545440 SLC16A2P36021 539 aa8.97□□□□□ -0.97
SNHG1-223ENST00000545440 SNX17Q15036 470 aa8.97□□□□□ -0.97
SNHG1-223ENST00000545440 LRRC41Q15345 812 aa8.97□□□□□ -0.97
SNHG1-223ENST00000545440 LRRC26Q2I0M4 334 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 166.4 ms