RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 KIF18BQ86Y91 864 aa8.05□□□□□ -1.12
COPA-206ENST00000545266 UHMK1Q8TAS1 419 aaKnown RBP8.05□□□□□ -1.12
COPA-206ENST00000545266 TARS2Q9BW92 718 aaKnown RBP8.05□□□□□ -1.12
COPA-206ENST00000545266 NUDT5Q9UKK9 219 aa8.05□□□□□ -1.12
COPA-206ENST00000545266 CBLCQ9ULV8 474 aa8.05□□□□□ -1.12
COPA-206ENST00000545266 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.05□□□□□ -1.12
COPA-206ENST00000545266 TCRBV5S4A2TA0A5A2 114 aa8.04□□□□□ -1.12
COPA-206ENST00000545266 CCDC66A2RUB6 948 aa8.04□□□□□ -1.12
COPA-206ENST00000545266 ZNF561-AS1K7EIQ3 104 aa8.04□□□□□ -1.12
COPA-206ENST00000545266 HGSO14964 777 aaPredicted RBP8.04□□□□□ -1.12
COPA-206ENST00000545266 OPA1O60313 960 aa8.04□□□□□ -1.12
COPA-206ENST00000545266 APPP05067 770 aa8.04□□□□□ -1.12
COPA-206ENST00000545266 SRGAP2CP0DJJ0 459 aa8.04□□□□□ -1.12
COPA-206ENST00000545266 EPHA5P54756 1037 aa8.04□□□□□ -1.12
COPA-206ENST00000545266 RAB3GAP1Q15042 981 aa8.04□□□□□ -1.12
COPA-206ENST00000545266 GPR19Q15760 415 aa8.04□□□□□ -1.12
COPA-206ENST00000545266 PLEKHN1Q494U1 663 aaPredicted RBP8.04□□□□□ -1.12
COPA-206ENST00000545266 MCTP1Q6DN14 999 aa8.04□□□□□ -1.12
COPA-206ENST00000545266 KRT26Q7Z3Y9 468 aa8.04□□□□□ -1.12
COPA-206ENST00000545266 DDX53Q86TM3 631 aaKnown RBP8.04□□□□□ -1.12
COPA-206ENST00000545266 PPM1KQ8N3J5 372 aa8.04□□□□□ -1.12
COPA-206ENST00000545266 PIP4K2CQ8TBX8 421 aa8.04□□□□□ -1.12
COPA-206ENST00000545266 PHOSPHO1Q8TCT1 267 aa8.04□□□□□ -1.12
COPA-206ENST00000545266 KCNJ15Q99712 375 aa8.04□□□□□ -1.12
COPA-206ENST00000545266 SMOC1Q9H4F8 434 aa8.04□□□□□ -1.12
COPA-206ENST00000545266 ZC3H12DA2A288 527 aaKnown RBP8.03□□□□□ -1.12
COPA-206ENST00000545266 F8W031 263 aaPredicted RBP8.03□□□□□ -1.12
COPA-206ENST00000545266 NKRFO15226 690 aaKnown RBP eCLIP8.03□□□□□ -1.12
COPA-206ENST00000545266 AMY2AP04746 511 aa8.03□□□□□ -1.12
COPA-206ENST00000545266 PYGMP11217 842 aa8.03□□□□□ -1.12
COPA-206ENST00000545266 AMY2BP19961 511 aa8.03□□□□□ -1.12
COPA-206ENST00000545266 FBLN1P23142 703 aa8.03□□□□□ -1.12
COPA-206ENST00000545266 PDE6BP35913 854 aa8.03□□□□□ -1.12
COPA-206ENST00000545266 FLT3P36888 993 aa8.03□□□□□ -1.12
COPA-206ENST00000545266 PRR5P85299 388 aa8.03□□□□□ -1.12
COPA-206ENST00000545266 TMEM177Q53S58 311 aa8.03□□□□□ -1.12
COPA-206ENST00000545266 STEAP3Q658P3 488 aa8.03□□□□□ -1.12
COPA-206ENST00000545266 CDCA2Q69YH5 1023 aaPredicted RBP8.03□□□□□ -1.12
COPA-206ENST00000545266 OTOP1Q7RTM1 612 aa8.03□□□□□ -1.12
COPA-206ENST00000545266 RNF180Q86T96 592 aa8.03□□□□□ -1.12
COPA-206ENST00000545266 IGSF22Q8N9C0 903 aa8.03□□□□□ -1.12
COPA-206ENST00000545266 SH3RF2Q8TEC5 729 aa8.03□□□□□ -1.12
COPA-206ENST00000545266 AP5M1Q9H0R1 490 aa8.03□□□□□ -1.12
COPA-206ENST00000545266 SAMD15Q9P1V8 674 aa8.03□□□□□ -1.12
COPA-206ENST00000545266 COQ6Q9Y2Z9 468 aa8.03□□□□□ -1.12
COPA-206ENST00000545266 NUDT19A8MXV4 375 aa8.02□□□□□ -1.13
COPA-206ENST00000545266 KRIT1O00522 736 aa8.02□□□□□ -1.13
COPA-206ENST00000545266 JMJD7P0C870 316 aa8.02□□□□□ -1.13
COPA-206ENST00000545266 GNAT1P11488 350 aa8.02□□□□□ -1.13
COPA-206ENST00000545266 MYCLP1P12525 358 aaPredicted RBP8.02□□□□□ -1.13
COPA-206ENST00000545266 PDE6AP16499 860 aa8.02□□□□□ -1.13
COPA-206ENST00000545266 STAT3P40763 770 aa8.02□□□□□ -1.13
COPA-206ENST00000545266 HHIPL2Q6UWX4 724 aa8.02□□□□□ -1.13
COPA-206ENST00000545266 UBE2R2Q712K3 238 aaPredicted RBP8.02□□□□□ -1.13
COPA-206ENST00000545266 AHI1Q8N157 1196 aa8.02□□□□□ -1.13
COPA-206ENST00000545266 SMURF1Q9HCE7 757 aa8.02□□□□□ -1.13
COPA-206ENST00000545266 PALD1Q9ULE6 856 aa8.02□□□□□ -1.13
COPA-206ENST00000545266 SIT1Q9Y3P8 196 aa8.02□□□□□ -1.13
COPA-206ENST00000545266 IRS2Q9Y4H2 1338 aa8.02□□□□□ -1.13
COPA-206ENST00000545266 CBX4O00257 560 aa8.01□□□□□ -1.13
COPA-206ENST00000545266 TRAF5O00463 557 aa8.01□□□□□ -1.13
COPA-206ENST00000545266 PDE8AO60658 829 aa8.01□□□□□ -1.13
COPA-206ENST00000545266 MAFKO60675 156 aa8.01□□□□□ -1.13
COPA-206ENST00000545266 GLRX3O76003 335 aaKnown RBP8.01□□□□□ -1.13
COPA-206ENST00000545266 COL6A2P12110 1019 aa8.01□□□□□ -1.13
COPA-206ENST00000545266 YBX3P16989 372 aaKnown RBP eCLIP8.01□□□□□ -1.13
COPA-206ENST00000545266 VIPR1P32241 457 aa8.01□□□□□ -1.13
COPA-206ENST00000545266 ST5P78524 1137 aa8.01□□□□□ -1.13
COPA-206ENST00000545266 CRY1Q16526 586 aa8.01□□□□□ -1.13
COPA-206ENST00000545266 CFAP100Q494V2 611 aa8.01□□□□□ -1.13
COPA-206ENST00000545266 OLFML2BQ68BL8 750 aa8.01□□□□□ -1.13
COPA-206ENST00000545266 PRR23BQ6ZRT6 265 aa8.01□□□□□ -1.13
COPA-206ENST00000545266 OSTM1Q86WC4 334 aa8.01□□□□□ -1.13
COPA-206ENST00000545266 SPC25Q9HBM1 224 aa8.01□□□□□ -1.13
COPA-206ENST00000545266 CATSPERZQ9NTU4 200 aa8.01□□□□□ -1.13
COPA-206ENST00000545266 HSPBP1Q9NZL4 362 aa8.01□□□□□ -1.13
COPA-206ENST00000545266 ASH2LQ9UBL3 628 aa8.01□□□□□ -1.13
COPA-206ENST00000545266 MYOCOSA0A1B0GUC4 107 aa8□□□□□ -1.13
COPA-206ENST00000545266 TCRBV5S2A0A599 114 aa8□□□□□ -1.13
COPA-206ENST00000545266 RNF187Q5TA31 235 aaPredicted RBP8□□□□□ -1.13
COPA-206ENST00000545266 ZC3H14Q6PJT7 736 aaKnown RBP8□□□□□ -1.13
COPA-206ENST00000545266 MPZL3Q6UWV2 235 aa8□□□□□ -1.13
COPA-206ENST00000545266 ARHGAP36Q6ZRI8 547 aa8□□□□□ -1.13
COPA-206ENST00000545266 MIB1Q86YT6 1006 aa8□□□□□ -1.13
COPA-206ENST00000545266 TTLL11Q8NHH1 800 aa8□□□□□ -1.13
COPA-206ENST00000545266 WNK4Q96J92 1243 aa8□□□□□ -1.13
COPA-206ENST00000545266 CAAP1Q9H8G2 361 aa8□□□□□ -1.13
COPA-206ENST00000545266 DSEQ9UL01 958 aa8□□□□□ -1.13
COPA-206ENST00000545266 SRPK3Q9UPE1 567 aa8□□□□□ -1.13
COPA-206ENST00000545266 NUB1Q9Y5A7 615 aa8□□□□□ -1.13
COPA-206ENST00000545266 HCFC2Q9Y5Z7 792 aa8□□□□□ -1.13
COPA-206ENST00000545266 MAN2B1O00754 1011 aa7.99□□□□□ -1.13
COPA-206ENST00000545266 DNAJC6O75061 913 aa7.99□□□□□ -1.13
COPA-206ENST00000545266 DNM2P50570 870 aa7.99□□□□□ -1.13
COPA-206ENST00000545266 JAM2P57087 298 aa7.99□□□□□ -1.13
COPA-206ENST00000545266 PCBP1Q15365 356 aaKnown RBP eCLIP7.99□□□□□ -1.13
COPA-206ENST00000545266 ARHGAP44Q17R89 818 aa7.99□□□□□ -1.13
COPA-206ENST00000545266 PIK3R6Q5UE93 754 aa7.99□□□□□ -1.13
COPA-206ENST00000545266 CNNM4Q6P4Q7 775 aa7.99□□□□□ -1.13
COPA-206ENST00000545266 TRIM48Q8IWZ4 208 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms