RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 RSPH10B2B2RC85 870 aa11.05□□□□□ -0.64
CHD4-212ENST00000545083 ORC4O43929 436 aa11.05□□□□□ -0.64
CHD4-212ENST00000545083 ST18O60284 1047 aa11.05□□□□□ -0.64
CHD4-212ENST00000545083 TBX10O75333 385 aa11.05□□□□□ -0.64
CHD4-212ENST00000545083 UPP2O95045 317 aa11.05□□□□□ -0.64
CHD4-212ENST00000545083 LINC00271P0C7V0 271 aa11.05□□□□□ -0.64
CHD4-212ENST00000545083 RSPH10BP0C881 870 aa11.05□□□□□ -0.64
CHD4-212ENST00000545083 PDHBP11177 359 aa11.05□□□□□ -0.64
CHD4-212ENST00000545083 TOP1P11387 765 aaKnown RBP11.05□□□□□ -0.64
CHD4-212ENST00000545083 GTF2F1P35269 517 aaKnown RBP eCLIP11.05□□□□□ -0.64
CHD4-212ENST00000545083 PTPN5P54829 565 aa11.05□□□□□ -0.64
CHD4-212ENST00000545083 HYAL1Q12794 435 aa11.05□□□□□ -0.64
CHD4-212ENST00000545083 ZMYM1Q5SVZ6 1142 aa11.05□□□□□ -0.64
CHD4-212ENST00000545083 VPS53Q5VIR6 699 aa11.05□□□□□ -0.64
CHD4-212ENST00000545083 BMP8AQ7Z5Y6 402 aa11.05□□□□□ -0.64
CHD4-212ENST00000545083 SYTL5Q8TDW5 730 aaPredicted RBP11.05□□□□□ -0.64
CHD4-212ENST00000545083 EDAQ92838 391 aa11.05□□□□□ -0.64
CHD4-212ENST00000545083 TOP1MTQ969P6 601 aa11.05□□□□□ -0.64
CHD4-212ENST00000545083 EMID1Q96A84 441 aaPredicted RBP11.05□□□□□ -0.64
CHD4-212ENST00000545083 YME1L1Q96TA2 773 aa11.05□□□□□ -0.64
CHD4-212ENST00000545083 CPVLQ9H3G5 476 aa11.05□□□□□ -0.64
CHD4-212ENST00000545083 ALG13Q9NP73 1137 aaKnown RBP11.05□□□□□ -0.64
CHD4-212ENST00000545083 DDX41Q9UJV9 622 aaKnown RBP11.05□□□□□ -0.64
CHD4-212ENST00000545083 CACNA1AO00555 2505 aa11.05□□□□□ -0.64
CHD4-212ENST00000545083 EMSYQ7Z589 1322 aa11.05□□□□□ -0.64
CHD4-212ENST00000545083 MYO15AQ9UKN7 3530 aa11.05□□□□□ -0.64
CHD4-212ENST00000545083 DMDP11532 3685 aa11.04□□□□□ -0.64
CHD4-212ENST00000545083 ATG2AQ2TAZ0 1938 aa11.04□□□□□ -0.64
CHD4-212ENST00000545083 B4DLN1 442 aa11.04□□□□□ -0.64
CHD4-212ENST00000545083 GRM6O15303 877 aa11.04□□□□□ -0.64
CHD4-212ENST00000545083 LINC01565O15544 149 aa11.04□□□□□ -0.64
CHD4-212ENST00000545083 FGRP09769 529 aa11.04□□□□□ -0.64
CHD4-212ENST00000545083 SNHG28P0DPA3 235 aa11.04□□□□□ -0.64
CHD4-212ENST00000545083 THPOP40225 353 aa11.04□□□□□ -0.64
CHD4-212ENST00000545083 MRPL12P52815 198 aaKnown RBP11.04□□□□□ -0.64
CHD4-212ENST00000545083 ZNF543Q08ER8 600 aa11.04□□□□□ -0.64
CHD4-212ENST00000545083 TRIM67Q6ZTA4 783 aa11.04□□□□□ -0.64
CHD4-212ENST00000545083 SERINC5Q86VE9 423 aa11.04□□□□□ -0.64
CHD4-212ENST00000545083 RGS22Q8NE09 1264 aa11.04□□□□□ -0.64
CHD4-212ENST00000545083 POP1Q99575 1024 aaKnown RBP11.04□□□□□ -0.64
CHD4-212ENST00000545083 KATNAL1Q9BW62 490 aa11.04□□□□□ -0.64
CHD4-212ENST00000545083 FAM86C1Q9NVL1 165 aa11.04□□□□□ -0.64
CHD4-212ENST00000545083 ANAPC4Q9UJX5 808 aa11.04□□□□□ -0.64
CHD4-212ENST00000545083 COL4A6Q14031 1691 aa11.04□□□□□ -0.64
CHD4-212ENST00000545083 TMEM221A6NGB7 291 aa11.03□□□□□ -0.64
CHD4-212ENST00000545083 M0R296 226 aa11.03□□□□□ -0.64
CHD4-212ENST00000545083 STXBP3O00186 592 aa11.03□□□□□ -0.64
CHD4-212ENST00000545083 SORBS3O60504 671 aa11.03□□□□□ -0.64
CHD4-212ENST00000545083 CSPG5O95196 566 aa11.03□□□□□ -0.64
CHD4-212ENST00000545083 HOXD8P13378 290 aaPredicted RBP11.03□□□□□ -0.64
CHD4-212ENST00000545083 SMAD4Q13485 552 aaKnown RBP11.03□□□□□ -0.64
CHD4-212ENST00000545083 DHX37Q8IY37 1157 aaKnown RBP11.03□□□□□ -0.64
CHD4-212ENST00000545083 PPTC7Q8NI37 304 aa11.03□□□□□ -0.64
CHD4-212ENST00000545083 NSUN6Q8TEA1 469 aaKnown RBP11.03□□□□□ -0.64
CHD4-212ENST00000545083 PBXIP1Q96AQ6 731 aa11.03□□□□□ -0.64
CHD4-212ENST00000545083 RMDN3Q96TC7 470 aa11.03□□□□□ -0.64
CHD4-212ENST00000545083 PNMA2Q9UL42 364 aa11.03□□□□□ -0.64
CHD4-212ENST00000545083 RIF1Q5UIP0 2472 aaKnown RBP11.03□□□□□ -0.64
CHD4-212ENST00000545083 NCK2O43639 380 aa11.02□□□□□ -0.65
CHD4-212ENST00000545083 GFRA3O60609 400 aa11.02□□□□□ -0.65
CHD4-212ENST00000545083 RGS20O76081 388 aa11.02□□□□□ -0.65
CHD4-212ENST00000545083 CTSHP09668 335 aa11.02□□□□□ -0.65
CHD4-212ENST00000545083 GOLGA8HP0CJ92 632 aa11.02□□□□□ -0.65
CHD4-212ENST00000545083 MS4A1P11836 297 aa11.02□□□□□ -0.65
CHD4-212ENST00000545083 CTNNB1P35222 781 aa11.02□□□□□ -0.65
CHD4-212ENST00000545083 LAMC2Q13753 1193 aa11.02□□□□□ -0.65
CHD4-212ENST00000545083 STXBP2Q15833 593 aa11.02□□□□□ -0.65
CHD4-212ENST00000545083 HSDL1Q3SXM5 330 aa11.02□□□□□ -0.65
CHD4-212ENST00000545083 RRP12Q5JTH9 1297 aaKnown RBP11.02□□□□□ -0.65
CHD4-212ENST00000545083 PI4K2BQ8TCG2 481 aa11.02□□□□□ -0.65
CHD4-212ENST00000545083 OTUD7AQ8TE49 926 aaPredicted RBP11.02□□□□□ -0.65
CHD4-212ENST00000545083 SEPT8Q92599 483 aa11.02□□□□□ -0.65
CHD4-212ENST00000545083 GPATCH3Q96I76 525 aa11.02□□□□□ -0.65
CHD4-212ENST00000545083 IWS1Q96ST2 819 aa11.02□□□□□ -0.65
CHD4-212ENST00000545083 FSD1Q9BTV5 496 aa11.02□□□□□ -0.65
CHD4-212ENST00000545083 IFIH1Q9BYX4 1025 aaKnown RBP11.02□□□□□ -0.65
CHD4-212ENST00000545083 UBA5Q9GZZ9 404 aa11.02□□□□□ -0.65
CHD4-212ENST00000545083 IGFLR1Q9H665 355 aa11.02□□□□□ -0.65
CHD4-212ENST00000545083 TOMM22Q9NS69 142 aa11.02□□□□□ -0.65
CHD4-212ENST00000545083 TCP11L1Q9NUJ3 509 aa11.02□□□□□ -0.65
CHD4-212ENST00000545083 CD207Q9UJ71 328 aa11.02□□□□□ -0.65
CHD4-212ENST00000545083 MRVI1Q9Y6F6 885 aa11.02□□□□□ -0.65
CHD4-212ENST00000545083 NLRC5Q86WI3 1866 aa11.02□□□□□ -0.65
CHD4-212ENST00000545083 C5orf67F2Z3F1 127 aa11.01□□□□□ -0.65
CHD4-212ENST00000545083 TREHO43280 583 aa11.01□□□□□ -0.65
CHD4-212ENST00000545083 EIF2AK2P19525 551 aaKnown RBP11.01□□□□□ -0.65
CHD4-212ENST00000545083 HOXC8P31273 242 aa11.01□□□□□ -0.65
CHD4-212ENST00000545083 BMPR1AP36894 532 aa11.01□□□□□ -0.65
CHD4-212ENST00000545083 VCPP55072 806 aaKnown RBP11.01□□□□□ -0.65
CHD4-212ENST00000545083 ZXDAP98168 799 aa11.01□□□□□ -0.65
CHD4-212ENST00000545083 HNRNPUQ00839 825 aaKnown RBP eCLIP11.01□□□□□ -0.65
CHD4-212ENST00000545083 CAMK1Q14012 370 aa11.01□□□□□ -0.65
CHD4-212ENST00000545083 CDC37Q16543 378 aaPredicted RBP11.01□□□□□ -0.65
CHD4-212ENST00000545083 MYSM1Q5VVJ2 828 aa11.01□□□□□ -0.65
CHD4-212ENST00000545083 FIBCD1Q8N539 461 aa11.01□□□□□ -0.65
CHD4-212ENST00000545083 MSLNLQ96KJ4 702 aa11.01□□□□□ -0.65
CHD4-212ENST00000545083 C16orf70Q9BSU1 422 aa11.01□□□□□ -0.65
CHD4-212ENST00000545083 RC3H2Q9HBD1 1191 aaKnown RBP11.01□□□□□ -0.65
CHD4-212ENST00000545083 KIAA1217Q5T5P2 1943 aa11.01□□□□□ -0.65
CHD4-212ENST00000545083 C17orf102A2RUQ5 167 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms