RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 FAM20AQ96MK3 541 aa20.07■□□□□ 0.8
TNFAIP1-202ENST00000544907 VPS33BQ9H267 617 aa20.07■□□□□ 0.8
TNFAIP1-202ENST00000544907 SLC39A2Q9NP94 309 aa20.07■□□□□ 0.8
TNFAIP1-202ENST00000544907 SCN9AQ15858 1988 aa20.07■□□□□ 0.8
TNFAIP1-202ENST00000544907 DICER1Q9UPY3 1922 aaKnown RBP20.07■□□□□ 0.8
TNFAIP1-202ENST00000544907 PIK3CDO00329 1044 aa20.07■□□□□ 0.8
TNFAIP1-202ENST00000544907 SREBF1P36956 1147 aa20.07■□□□□ 0.8
TNFAIP1-202ENST00000544907 VWA3BQ502W6 1294 aa20.07■□□□□ 0.8
TNFAIP1-202ENST00000544907 SYDE2Q5VT97 1194 aa20.07■□□□□ 0.8
TNFAIP1-202ENST00000544907 WDR59Q6PJI9 974 aa20.07■□□□□ 0.8
TNFAIP1-202ENST00000544907 FBXO11Q86XK2 927 aa20.07■□□□□ 0.8
TNFAIP1-202ENST00000544907 LRRN4CLQ8ND94 238 aa20.07■□□□□ 0.8
TNFAIP1-202ENST00000544907 GOLGA1Q92805 767 aa20.07■□□□□ 0.8
TNFAIP1-202ENST00000544907 NUDT12Q9BQG2 462 aa20.07■□□□□ 0.8
TNFAIP1-202ENST00000544907 POTEB2H3BUK9 544 aa20.06■□□□□ 0.8
TNFAIP1-202ENST00000544907 GNA14O95837 355 aa20.06■□□□□ 0.8
TNFAIP1-202ENST00000544907 NDUFB10O96000 172 aa20.06■□□□□ 0.8
TNFAIP1-202ENST00000544907 BMP3P12645 472 aa20.06■□□□□ 0.8
TNFAIP1-202ENST00000544907 BMS1Q14692 1282 aaKnown RBP20.06■□□□□ 0.8
TNFAIP1-202ENST00000544907 ZCWPW2Q504Y3 356 aa20.06■□□□□ 0.8
TNFAIP1-202ENST00000544907 ZNF569Q5MCW4 686 aa20.06■□□□□ 0.8
TNFAIP1-202ENST00000544907 SRGAP1Q7Z6B7 1085 aa20.06■□□□□ 0.8
TNFAIP1-202ENST00000544907 CCDC65Q8IXS2 484 aa20.06■□□□□ 0.8
TNFAIP1-202ENST00000544907 MYOCDQ8IZQ8 938 aa20.06■□□□□ 0.8
TNFAIP1-202ENST00000544907 LARGE2Q8N3Y3 721 aa20.06■□□□□ 0.8
TNFAIP1-202ENST00000544907 ACRBPQ8NEB7 543 aa20.06■□□□□ 0.8
TNFAIP1-202ENST00000544907 CEP63Q96MT8 703 aa20.06■□□□□ 0.8
TNFAIP1-202ENST00000544907 NAPGQ99747 312 aaPredicted RBP20.06■□□□□ 0.8
TNFAIP1-202ENST00000544907 FRMD3A2A2Y4 597 aa20.05■□□□□ 0.8
TNFAIP1-202ENST00000544907 EIF3CLB5ME19 914 aaKnown RBP20.05■□□□□ 0.8
TNFAIP1-202ENST00000544907 CYP3A4P08684 503 aa20.05■□□□□ 0.8
TNFAIP1-202ENST00000544907 MARSP56192 900 aaKnown RBP20.05■□□□□ 0.8
TNFAIP1-202ENST00000544907 ARHGAP4P98171 946 aa20.05■□□□□ 0.8
TNFAIP1-202ENST00000544907 WHAMMP3Q1A5X7 153 aa20.05■□□□□ 0.8
TNFAIP1-202ENST00000544907 FKBP1CQ5VVH2 108 aa20.05■□□□□ 0.8
TNFAIP1-202ENST00000544907 LRRC55Q6ZSA7 311 aa20.05■□□□□ 0.8
TNFAIP1-202ENST00000544907 KCNK18Q7Z418 384 aa20.05■□□□□ 0.8
TNFAIP1-202ENST00000544907 ERMNQ8TAM6 284 aa20.05■□□□□ 0.8
TNFAIP1-202ENST00000544907 ETNPPLQ8TBG4 499 aa20.05■□□□□ 0.8
TNFAIP1-202ENST00000544907 EIF3CQ99613 913 aaKnown RBP20.05■□□□□ 0.8
TNFAIP1-202ENST00000544907 NDST4Q9H3R1 872 aa20.05■□□□□ 0.8
TNFAIP1-202ENST00000544907 RASSF10A6NK89 507 aa20.04■□□□□ 0.8
TNFAIP1-202ENST00000544907 USP17L15C9J2P7 530 aa20.04■□□□□ 0.8
TNFAIP1-202ENST00000544907 USP17L13C9JLJ4 530 aa20.04■□□□□ 0.8
TNFAIP1-202ENST00000544907 USP17L11C9JVI0 530 aa20.04■□□□□ 0.8
TNFAIP1-202ENST00000544907 USP17L18D6R9N7 530 aa20.04■□□□□ 0.8
TNFAIP1-202ENST00000544907 USP17L22D6RA61 530 aa20.04■□□□□ 0.8
TNFAIP1-202ENST00000544907 USP17L17D6RBQ6 530 aa20.04■□□□□ 0.8
TNFAIP1-202ENST00000544907 USP17L19D6RCP7 530 aa20.04■□□□□ 0.8
TNFAIP1-202ENST00000544907 USP17L20D6RJB6 530 aa20.04■□□□□ 0.8
TNFAIP1-202ENST00000544907 PSMD14O00487 310 aa20.04■□□□□ 0.8
TNFAIP1-202ENST00000544907 PES1O00541 588 aaKnown RBP20.04■□□□□ 0.8
TNFAIP1-202ENST00000544907 TUBBP07437 444 aa20.04■□□□□ 0.8
TNFAIP1-202ENST00000544907 PRELPP51888 382 aa20.04■□□□□ 0.8
TNFAIP1-202ENST00000544907 CACNB3P54284 484 aa20.04■□□□□ 0.8
TNFAIP1-202ENST00000544907 FKBP3Q00688 224 aaKnown RBP20.04■□□□□ 0.8
TNFAIP1-202ENST00000544907 USP17L24Q0WX57 530 aa20.04■□□□□ 0.8
TNFAIP1-202ENST00000544907 COASYQ13057 564 aa20.04■□□□□ 0.8
TNFAIP1-202ENST00000544907 FAM26FQ5R3K3 315 aa20.04■□□□□ 0.8
TNFAIP1-202ENST00000544907 USP17L6PQ6QN14 398 aa20.04■□□□□ 0.8
TNFAIP1-202ENST00000544907 PPP4R3CPQ6ZMV5 832 aa20.04■□□□□ 0.8
TNFAIP1-202ENST00000544907 KRT222Q8N1A0 295 aa20.04■□□□□ 0.8
TNFAIP1-202ENST00000544907 CHP1Q99653 195 aa20.04■□□□□ 0.8
TNFAIP1-202ENST00000544907 TMOD2Q9NZR1 351 aa20.04■□□□□ 0.8
TNFAIP1-202ENST00000544907 RNF181Q9P0P0 153 aa20.04■□□□□ 0.8
TNFAIP1-202ENST00000544907 SIK3Q9Y2K2 1263 aa20.04■□□□□ 0.8
TNFAIP1-202ENST00000544907 IPO7O95373 1038 aaKnown RBP20.03■□□□□ 0.8
TNFAIP1-202ENST00000544907 CLCN6P51797 869 aa20.03■□□□□ 0.8
TNFAIP1-202ENST00000544907 ECM1Q16610 540 aa20.03■□□□□ 0.8
TNFAIP1-202ENST00000544907 DYMQ7RTS9 669 aa20.03■□□□□ 0.8
TNFAIP1-202ENST00000544907 ZC3H3Q8IXZ2 948 aaKnown RBP20.03■□□□□ 0.8
TNFAIP1-202ENST00000544907 JDP2Q8WYK2 163 aa20.03■□□□□ 0.8
TNFAIP1-202ENST00000544907 SLF1Q9BQI6 1058 aa20.03■□□□□ 0.8
TNFAIP1-202ENST00000544907 IRX2Q9BZI1 471 aaPredicted RBP20.03■□□□□ 0.8
TNFAIP1-202ENST00000544907 PANK4Q9NVE7 773 aa20.03■□□□□ 0.8
TNFAIP1-202ENST00000544907 PLAGL2Q9UPG8 496 aa20.03■□□□□ 0.8
TNFAIP1-202ENST00000544907 REXO2Q9Y3B8 237 aaKnown RBP20.03■□□□□ 0.8
TNFAIP1-202ENST00000544907 PCDHAC2Q9Y5I4 1007 aa20.03■□□□□ 0.8
TNFAIP1-202ENST00000544907 PSME4Q14997 1843 aa20.03■□□□□ 0.8
TNFAIP1-202ENST00000544907 MYH7BA7E2Y1 1941 aa20.03■□□□□ 0.8
TNFAIP1-202ENST00000544907 SPDYE3A6NKU9 549 aa20.03■□□□□ 0.8
TNFAIP1-202ENST00000544907 PLA2G6O60733 806 aa20.03■□□□□ 0.8
TNFAIP1-202ENST00000544907 ZRANB2O95218 330 aaKnown RBP eCLIP20.03■□□□□ 0.8
TNFAIP1-202ENST00000544907 PLA2G4BP0C869 781 aa20.03■□□□□ 0.8
TNFAIP1-202ENST00000544907 IDEP14735 1019 aa20.03■□□□□ 0.8
TNFAIP1-202ENST00000544907 SPIRE1Q08AE8 756 aa20.03■□□□□ 0.8
TNFAIP1-202ENST00000544907 TMCO3Q6UWJ1 677 aa20.03■□□□□ 0.8
TNFAIP1-202ENST00000544907 NIM1KQ8IY84 436 aa20.03■□□□□ 0.8
TNFAIP1-202ENST00000544907 TDRD3Q9H7E2 651 aaKnown RBP20.03■□□□□ 0.8
TNFAIP1-202ENST00000544907 ARHGEF10LQ9HCE6 1279 aa20.03■□□□□ 0.8
TNFAIP1-202ENST00000544907 COL4A5P29400 1685 aa20.02■□□□□ 0.8
TNFAIP1-202ENST00000544907 KRT86O43790 486 aa20.02■□□□□ 0.8
TNFAIP1-202ENST00000544907 RPA1P27694 616 aa20.02■□□□□ 0.8
TNFAIP1-202ENST00000544907 FAM193AP78312 1265 aa20.02■□□□□ 0.8
TNFAIP1-202ENST00000544907 KIF4BQ2VIQ3 1234 aa20.02■□□□□ 0.8
TNFAIP1-202ENST00000544907 C9orf131Q5VYM1 1079 aa20.02■□□□□ 0.8
TNFAIP1-202ENST00000544907 SLC35F6Q8N357 371 aa20.02■□□□□ 0.8
TNFAIP1-202ENST00000544907 FAM151AQ8WW52 585 aa20.02■□□□□ 0.8
TNFAIP1-202ENST00000544907 CSRNP1Q96S65 589 aa20.02■□□□□ 0.8
TNFAIP1-202ENST00000544907 TSGA10Q9BZW7 698 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms