RNA–Protein interactions for RNA: ENST00000544241.6

TCF4-209, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-209ENST00000544241 CCDC134Q9H6E4 229 aa11.34□□□□□ -0.59
TCF4-209ENST00000544241 FAM114A2Q9NRY5 505 aa11.34□□□□□ -0.59
TCF4-209ENST00000544241 PANK4Q9NVE7 773 aa11.34□□□□□ -0.59
TCF4-209ENST00000544241 RGL1Q9NZL6 768 aa11.34□□□□□ -0.59
TCF4-209ENST00000544241 TMEM59LQ9UK28 342 aa11.34□□□□□ -0.59
TCF4-209ENST00000544241 CCDC169A6NNP5 214 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 HIP1RO75146 1068 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 CTCFP49711 727 aaPredicted RBP11.33□□□□□ -0.6
TCF4-209ENST00000544241 TAF11Q15544 211 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 MEI1Q5TIA1 1274 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 APBB1IPQ7Z5R6 666 aaPredicted RBP11.33□□□□□ -0.6
TCF4-209ENST00000544241 SDCCAG8Q86SQ7 713 aaPredicted RBP11.33□□□□□ -0.6
TCF4-209ENST00000544241 C14orf37Q86TY3 774 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 TTC5Q8N0Z6 440 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 CCDC82Q8N4S0 544 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 FBF1Q8TES7 1133 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 TLCD1Q96CP7 247 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 KLHL29Q96CT2 875 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 INPP4AQ96PE3 977 aaPredicted RBP11.33□□□□□ -0.6
TCF4-209ENST00000544241 MTRQ99707 1265 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 KCNMB3Q9NPA1 279 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 DISC1Q9NRI5 854 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 FBXL5Q9UKA1 691 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 LRP6O75581 1613 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 PXDNQ92626 1479 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 SIPA1L3O60292 1781 aaPredicted RBP11.33□□□□□ -0.6
TCF4-209ENST00000544241 PRPF3O43395 683 aaKnown RBP11.33□□□□□ -0.6
TCF4-209ENST00000544241 PALMO75781 387 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 NPTXRO95502 500 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 SETSIPP0DME0 302 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 HOXA7P31268 230 aaPredicted RBP11.33□□□□□ -0.6
TCF4-209ENST00000544241 LAMB3Q13751 1172 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 LBRQ14739 615 aaKnown RBP11.33□□□□□ -0.6
TCF4-209ENST00000544241 NAB2Q15742 525 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 UAP1Q16222 522 aaPredicted RBP11.33□□□□□ -0.6
TCF4-209ENST00000544241 CMPK2Q5EBM0 449 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 ZNF654Q8IZM8 581 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 STAG2Q8N3U4 1231 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 ACTRT1Q8TDG2 376 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 SYN2Q92777 582 aaPredicted RBP11.33□□□□□ -0.6
TCF4-209ENST00000544241 MTMR8Q96EF0 704 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 TRIM7Q9C029 511 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 VCXQ9H320 206 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 SLITRK6Q9H5Y7 841 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 CNOT8Q9UFF9 292 aaKnown RBP11.33□□□□□ -0.6
TCF4-209ENST00000544241 DENND2AQ9ULE3 1009 aa11.33□□□□□ -0.6
TCF4-209ENST00000544241 LTN1O94822 1766 aa11.32□□□□□ -0.6
TCF4-209ENST00000544241 ZNF142P52746 1687 aaPredicted RBP11.32□□□□□ -0.6
TCF4-209ENST00000544241 SART1O43290 800 aaKnown RBP11.32□□□□□ -0.6
TCF4-209ENST00000544241 BUB1O43683 1085 aa11.32□□□□□ -0.6
TCF4-209ENST00000544241 PLEKP08567 350 aaPredicted RBP11.32□□□□□ -0.6
TCF4-209ENST00000544241 LINGO3P0C6S8 592 aa11.32□□□□□ -0.6
TCF4-209ENST00000544241 PMS1P54277 932 aaKnown RBP11.32□□□□□ -0.6
TCF4-209ENST00000544241 ERVK-9P63128 1117 aa11.32□□□□□ -0.6
TCF4-209ENST00000544241 MXRA7P84157 204 aa11.32□□□□□ -0.6
TCF4-209ENST00000544241 DYNC1I2Q13409 638 aaKnown RBP11.32□□□□□ -0.6
TCF4-209ENST00000544241 VWA3BQ502W6 1294 aa11.32□□□□□ -0.6
TCF4-209ENST00000544241 MTHFD1LQ6UB35 978 aa11.32□□□□□ -0.6
TCF4-209ENST00000544241 RRAGAQ7L523 313 aa11.32□□□□□ -0.6
TCF4-209ENST00000544241 KLHL7Q8IXQ5 586 aa11.32□□□□□ -0.6
TCF4-209ENST00000544241 OR2W6PQ8NHA6 318 aa11.32□□□□□ -0.6
TCF4-209ENST00000544241 PGM2Q96G03 612 aa11.32□□□□□ -0.6
TCF4-209ENST00000544241 CTNNAL1Q9UBT7 734 aa11.32□□□□□ -0.6
TCF4-209ENST00000544241 UTP11Q9Y3A2 253 aaKnown RBP11.32□□□□□ -0.6
TCF4-209ENST00000544241 O00370 1275 aa11.32□□□□□ -0.6
TCF4-209ENST00000544241 SUN1O94901 812 aa11.32□□□□□ -0.6
TCF4-209ENST00000544241 GNAT2P19087 354 aa11.32□□□□□ -0.6
TCF4-209ENST00000544241 SKIV2L2P42285 1042 aaKnown RBP11.32□□□□□ -0.6
TCF4-209ENST00000544241 KLK7P49862 253 aa11.32□□□□□ -0.6
TCF4-209ENST00000544241 HSPA2P54652 639 aa11.32□□□□□ -0.6
TCF4-209ENST00000544241 COPS2P61201 443 aa11.32□□□□□ -0.6
TCF4-209ENST00000544241 RPS6KA1Q15418 735 aa11.32□□□□□ -0.6
TCF4-209ENST00000544241 PPP2R5EQ16537 467 aa11.32□□□□□ -0.6
TCF4-209ENST00000544241 SGSM1Q2NKQ1 1148 aa11.32□□□□□ -0.6
TCF4-209ENST00000544241 TDRD12Q587J7 1177 aaKnown RBP11.32□□□□□ -0.6
TCF4-209ENST00000544241 FAM133BQ5BKY9 247 aaKnown RBP11.32□□□□□ -0.6
TCF4-209ENST00000544241 ZC3H12AQ5D1E8 599 aaKnown RBP11.32□□□□□ -0.6
TCF4-209ENST00000544241 MIIPQ5JXC2 388 aa11.32□□□□□ -0.6
TCF4-209ENST00000544241 C10orf76Q5T2E6 689 aa11.32□□□□□ -0.6
TCF4-209ENST00000544241 LRP10Q7Z4F1 713 aa11.32□□□□□ -0.6
TCF4-209ENST00000544241 TMC3Q7Z5M5 1100 aa11.32□□□□□ -0.6
TCF4-209ENST00000544241 DZIP3Q86Y13 1208 aaKnown RBP11.32□□□□□ -0.6
TCF4-209ENST00000544241 LPIN2Q92539 896 aa11.32□□□□□ -0.6
TCF4-209ENST00000544241 MMRN2Q9H8L6 949 aa11.32□□□□□ -0.6
TCF4-209ENST00000544241 SLC52A2Q9HAB3 445 aa11.32□□□□□ -0.6
TCF4-209ENST00000544241 INTS9Q9NV88 658 aaKnown RBP11.32□□□□□ -0.6
TCF4-209ENST00000544241 MARF1Q9Y4F3 1742 aaKnown RBP11.31□□□□□ -0.6
TCF4-209ENST00000544241 MYH7P12883 1935 aa11.31□□□□□ -0.6
TCF4-209ENST00000544241 LRRC53A6NM62 1247 aa11.31□□□□□ -0.6
TCF4-209ENST00000544241 EVI5O60447 810 aa11.31□□□□□ -0.6
TCF4-209ENST00000544241 CAND2O75155 1236 aa11.31□□□□□ -0.6
TCF4-209ENST00000544241 CALM1P0DP23 149 aa11.31□□□□□ -0.6
TCF4-209ENST00000544241 CALM2P0DP24 149 aa11.31□□□□□ -0.6
TCF4-209ENST00000544241 CALM3P0DP25 149 aa11.31□□□□□ -0.6
TCF4-209ENST00000544241 ECHS1P30084 290 aa11.31□□□□□ -0.6
TCF4-209ENST00000544241 MSH2P43246 934 aa11.31□□□□□ -0.6
TCF4-209ENST00000544241 MMP13P45452 471 aa11.31□□□□□ -0.6
TCF4-209ENST00000544241 ALDH5A1P51649 535 aaPredicted RBP11.31□□□□□ -0.6
TCF4-209ENST00000544241 AMPD3Q01432 767 aa11.31□□□□□ -0.6
TCF4-209ENST00000544241 MAN2A1Q16706 1144 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms