RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 OPLAHO14841 1288 aa23.26■■□□□ 1.31
LPCAT3-211ENST00000543794 DHX16O60231 1041 aaKnown RBP23.26■■□□□ 1.31
LPCAT3-211ENST00000543794 LGR5O75473 907 aa23.26■■□□□ 1.31
LPCAT3-211ENST00000543794 CFBP00751 764 aa23.26■■□□□ 1.31
LPCAT3-211ENST00000543794 HSD17B4P51659 736 aa23.26■■□□□ 1.31
LPCAT3-211ENST00000543794 MYSM1Q5VVJ2 828 aa23.26■■□□□ 1.31
LPCAT3-211ENST00000543794 UBE2ZQ9H832 354 aaPredicted RBP23.26■■□□□ 1.31
LPCAT3-211ENST00000543794 C11orf16Q9NQ32 467 aa23.26■■□□□ 1.31
LPCAT3-211ENST00000543794 INSL6Q9Y581 213 aa23.26■■□□□ 1.31
LPCAT3-211ENST00000543794 RGS20O76081 388 aa23.25■■□□□ 1.31
LPCAT3-211ENST00000543794 RRP1P56182 461 aaKnown RBP23.25■■□□□ 1.31
LPCAT3-211ENST00000543794 MKRN4PQ13434 485 aaPredicted RBP23.25■■□□□ 1.31
LPCAT3-211ENST00000543794 HIC1Q14526 733 aa23.25■■□□□ 1.31
LPCAT3-211ENST00000543794 CELF3Q5SZQ8 465 aaKnown RBP23.25■■□□□ 1.31
LPCAT3-211ENST00000543794 FAM117BQ6P1L5 589 aa23.25■■□□□ 1.31
LPCAT3-211ENST00000543794 KCNV1Q6PIU1 500 aa23.25■■□□□ 1.31
LPCAT3-211ENST00000543794 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.25■■□□□ 1.31
LPCAT3-211ENST00000543794 STOX1Q6ZVD7 989 aa23.25■■□□□ 1.31
LPCAT3-211ENST00000543794 CRBNQ96SW2 442 aa23.25■■□□□ 1.31
LPCAT3-211ENST00000543794 PDCD2LQ9BRP1 358 aa23.25■■□□□ 1.31
LPCAT3-211ENST00000543794 AMNQ9BXJ7 453 aa23.25■■□□□ 1.31
LPCAT3-211ENST00000543794 LNPKQ9C0E8 428 aa23.25■■□□□ 1.31
LPCAT3-211ENST00000543794 MAP3K20Q9NYL2 800 aaKnown RBP23.25■■□□□ 1.31
LPCAT3-211ENST00000543794 RBAK-RBAKDNI3L0D1 243 aa23.24■■□□□ 1.31
LPCAT3-211ENST00000543794 HSDL1Q3SXM5 330 aa23.24■■□□□ 1.31
LPCAT3-211ENST00000543794 LEXMQ3ZCV2 418 aa23.24■■□□□ 1.31
LPCAT3-211ENST00000543794 VSIG10LQ86VR7 867 aa23.24■■□□□ 1.31
LPCAT3-211ENST00000543794 DBF4BQ8NFT6 615 aa23.24■■□□□ 1.31
LPCAT3-211ENST00000543794 EMSYQ7Z589 1322 aa23.24■■□□□ 1.31
LPCAT3-211ENST00000543794 HTRA4P83105 476 aaPredicted RBP23.23■■□□□ 1.31
LPCAT3-211ENST00000543794 SERINC5Q86VE9 423 aa23.23■■□□□ 1.31
LPCAT3-211ENST00000543794 MTMR8Q96EF0 704 aa23.23■■□□□ 1.31
LPCAT3-211ENST00000543794 SPATA33Q96N06 139 aa23.23■■□□□ 1.31
LPCAT3-211ENST00000543794 C17orf80Q9BSJ5 609 aa23.23■■□□□ 1.31
LPCAT3-211ENST00000543794 KIAA1217Q5T5P2 1943 aa23.22■■□□□ 1.31
LPCAT3-211ENST00000543794 RSPH10B2B2RC85 870 aa23.22■■□□□ 1.31
LPCAT3-211ENST00000543794 RSPH10BP0C881 870 aa23.22■■□□□ 1.31
LPCAT3-211ENST00000543794 TGFB3P10600 412 aa23.22■■□□□ 1.31
LPCAT3-211ENST00000543794 MYCLP12524 364 aaPredicted RBP23.22■■□□□ 1.31
LPCAT3-211ENST00000543794 SP2Q02086 613 aa23.22■■□□□ 1.31
LPCAT3-211ENST00000543794 CWC27Q6UX04 472 aaKnown RBP23.22■■□□□ 1.31
LPCAT3-211ENST00000543794 FAM178BQ8IXR5 827 aa23.22■■□□□ 1.31
LPCAT3-211ENST00000543794 STAG2Q8N3U4 1231 aa23.22■■□□□ 1.31
LPCAT3-211ENST00000543794 SAMD3Q8N6K7 520 aa23.22■■□□□ 1.31
LPCAT3-211ENST00000543794 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.22■■□□□ 1.31
LPCAT3-211ENST00000543794 C16orf70Q9BSU1 422 aa23.22■■□□□ 1.31
LPCAT3-211ENST00000543794 GGPS1O95749 300 aa23.21■■□□□ 1.31
LPCAT3-211ENST00000543794 AMHP03971 560 aa23.21■■□□□ 1.31
LPCAT3-211ENST00000543794 KCNA5P22460 613 aa23.21■■□□□ 1.31
LPCAT3-211ENST00000543794 THPOP40225 353 aa23.21■■□□□ 1.31
LPCAT3-211ENST00000543794 PLEKHG4Q58EX7 1191 aa23.21■■□□□ 1.31
LPCAT3-211ENST00000543794 FBXO22Q8NEZ5 403 aa23.21■■□□□ 1.31
LPCAT3-211ENST00000543794 SP7Q8TDD2 431 aaPredicted RBP23.21■■□□□ 1.31
LPCAT3-211ENST00000543794 DSCC1Q9BVC3 393 aa23.21■■□□□ 1.31
LPCAT3-211ENST00000543794 KRT23Q9C075 422 aa23.21■■□□□ 1.31
LPCAT3-211ENST00000543794 OSBPL3Q9H4L5 887 aa23.21■■□□□ 1.31
LPCAT3-211ENST00000543794 COL4A4P53420 1690 aaPredicted RBP23.21■■□□□ 1.31
LPCAT3-211ENST00000543794 FAM86C2PA6NEL3 165 aa23.2■■□□□ 1.3
LPCAT3-211ENST00000543794 ZBTB5O15062 677 aa23.2■■□□□ 1.3
LPCAT3-211ENST00000543794 PPP1R11O60927 126 aaPredicted RBP23.2■■□□□ 1.3
LPCAT3-211ENST00000543794 HOXC8P31273 242 aa23.2■■□□□ 1.3
LPCAT3-211ENST00000543794 PGM5Q15124 567 aa23.2■■□□□ 1.3
LPCAT3-211ENST00000543794 IMMTQ16891 758 aaKnown RBP23.2■■□□□ 1.3
LPCAT3-211ENST00000543794 MYOCDQ8IZQ8 938 aa23.2■■□□□ 1.3
LPCAT3-211ENST00000543794 GJD3Q8N144 294 aa23.2■■□□□ 1.3
LPCAT3-211ENST00000543794 CTNNA3Q9UI47 895 aa23.2■■□□□ 1.3
LPCAT3-211ENST00000543794 PCDHA1Q9Y5I3 950 aa23.2■■□□□ 1.3
LPCAT3-211ENST00000543794 KLRF2D3W0D1 207 aa23.19■■□□□ 1.3
LPCAT3-211ENST00000543794 SORBS3O60504 671 aa23.19■■□□□ 1.3
LPCAT3-211ENST00000543794 UBA1P22314 1058 aaKnown RBP23.19■■□□□ 1.3
LPCAT3-211ENST00000543794 HOXA13P31271 388 aaPredicted RBP23.19■■□□□ 1.3
LPCAT3-211ENST00000543794 IFIT1BQ5T764 474 aaKnown RBP23.19■■□□□ 1.3
LPCAT3-211ENST00000543794 PLEKHM2Q8IWE5 1019 aa23.19■■□□□ 1.3
LPCAT3-211ENST00000543794 SMC5Q8IY18 1101 aa23.19■■□□□ 1.3
LPCAT3-211ENST00000543794 IL31RAQ8NI17 732 aa23.19■■□□□ 1.3
LPCAT3-211ENST00000543794 ATP6V0A1Q93050 837 aa23.19■■□□□ 1.3
LPCAT3-211ENST00000543794 MRPL38Q96DV4 380 aaKnown RBP23.19■■□□□ 1.3
LPCAT3-211ENST00000543794 SAMD11Q96NU1 681 aa23.19■■□□□ 1.3
LPCAT3-211ENST00000543794 UBAC1Q9BSL1 405 aa23.19■■□□□ 1.3
LPCAT3-211ENST00000543794 C17orf102A2RUQ5 167 aa23.18■■□□□ 1.3
LPCAT3-211ENST00000543794 H3BRB1 525 aa23.18■■□□□ 1.3
LPCAT3-211ENST00000543794 EPC2Q52LR7 807 aa23.18■■□□□ 1.3
LPCAT3-211ENST00000543794 TOP1MTQ969P6 601 aa23.18■■□□□ 1.3
LPCAT3-211ENST00000543794 TUT1Q9H6E5 874 aaKnown RBP23.18■■□□□ 1.3
LPCAT3-211ENST00000543794 CNNM2Q9H8M5 875 aa23.18■■□□□ 1.3
LPCAT3-211ENST00000543794 MLXIPQ9HAP2 919 aa23.18■■□□□ 1.3
LPCAT3-211ENST00000543794 DIAPH3Q9NSV4 1193 aa23.18■■□□□ 1.3
LPCAT3-211ENST00000543794 MAD2L2Q9UI95 211 aa23.18■■□□□ 1.3
LPCAT3-211ENST00000543794 PALM3A6NDB9 673 aaPredicted RBP23.17■■□□□ 1.3
LPCAT3-211ENST00000543794 IL9P15248 144 aa23.17■■□□□ 1.3
LPCAT3-211ENST00000543794 SEC23AQ15436 765 aa23.17■■□□□ 1.3
LPCAT3-211ENST00000543794 PTPROQ16827 1216 aa23.17■■□□□ 1.3
LPCAT3-211ENST00000543794 PTCRAQ6ISU1 281 aaPredicted RBP23.17■■□□□ 1.3
LPCAT3-211ENST00000543794 NEK9Q8TD19 979 aa23.17■■□□□ 1.3
LPCAT3-211ENST00000543794 GPKOWQ92917 476 aaPredicted RBP eCLIP23.17■■□□□ 1.3
LPCAT3-211ENST00000543794 RNPEPQ9H4A4 650 aa23.17■■□□□ 1.3
LPCAT3-211ENST00000543794 GRXCR2A6NFK2 248 aa23.16■■□□□ 1.3
LPCAT3-211ENST00000543794 GCOM1H8Y6P7 765 aaPredicted RBP23.16■■□□□ 1.3
LPCAT3-211ENST00000543794 HIP1O00291 1037 aa23.16■■□□□ 1.3
LPCAT3-211ENST00000543794 TREHO43280 583 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms