RNA–Protein interactions for RNA: ENST00000543590.1

VPS37B-204, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 1,457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-204ENST00000543590 SPATA33Q96N06 139 aa16.43■□□□□ 0.22
VPS37B-204ENST00000543590 MYH7BA7E2Y1 1941 aa16.43■□□□□ 0.22
VPS37B-204ENST00000543590 LAMA3Q16787 3333 aa16.43■□□□□ 0.22
VPS37B-204ENST00000543590 SPATA31C2B4DYI2 1134 aa16.42■□□□□ 0.22
VPS37B-204ENST00000543590 HOXD8P13378 290 aaPredicted RBP16.42■□□□□ 0.22
VPS37B-204ENST00000543590 PSMA5P28066 241 aa16.42■□□□□ 0.22
VPS37B-204ENST00000543590 ICAM3P32942 547 aa16.42■□□□□ 0.22
VPS37B-204ENST00000543590 SMAD3P84022 425 aaKnown RBP16.42■□□□□ 0.22
VPS37B-204ENST00000543590 UBE2SQ16763 222 aa16.42■□□□□ 0.22
VPS37B-204ENST00000543590 HSDL1Q3SXM5 330 aa16.42■□□□□ 0.22
VPS37B-204ENST00000543590 WWC2Q6AWC2 1192 aa16.42■□□□□ 0.22
VPS37B-204ENST00000543590 XRRA1Q6P2D8 792 aa16.42■□□□□ 0.22
VPS37B-204ENST00000543590 FBXL16Q8N461 479 aa16.42■□□□□ 0.22
VPS37B-204ENST00000543590 WNT8AQ9H1J5 351 aa16.42■□□□□ 0.22
VPS37B-204ENST00000543590 MLXIPQ9HAP2 919 aa16.42■□□□□ 0.22
VPS37B-204ENST00000543590 IL23AQ9NPF7 189 aa16.42■□□□□ 0.22
VPS37B-204ENST00000543590 FIBPO43427 364 aa16.42■□□□□ 0.22
VPS37B-204ENST00000543590 PPFIA4O75335 1185 aa16.42■□□□□ 0.22
VPS37B-204ENST00000543590 ZNF286BP0CG31 522 aa16.42■□□□□ 0.22
VPS37B-204ENST00000543590 ADD1P35611 737 aaKnown RBP16.42■□□□□ 0.22
VPS37B-204ENST00000543590 METAP2P50579 478 aaKnown RBP eCLIP16.42■□□□□ 0.22
VPS37B-204ENST00000543590 SEMA3FQ13275 785 aa16.42■□□□□ 0.22
VPS37B-204ENST00000543590 FAM109BQ6ICB4 259 aaPredicted RBP16.42■□□□□ 0.22
VPS37B-204ENST00000543590 ZNF365Q70YC5 407 aa16.42■□□□□ 0.22
VPS37B-204ENST00000543590 SESTD1Q86VW0 696 aa16.42■□□□□ 0.22
VPS37B-204ENST00000543590 USP26Q9BXU7 913 aa16.42■□□□□ 0.22
VPS37B-204ENST00000543590 AGXT2Q9BYV1 514 aa16.42■□□□□ 0.22
VPS37B-204ENST00000543590 BCAS3Q9H6U6 928 aa16.42■□□□□ 0.22
VPS37B-204ENST00000543590 MTMR10Q9NXD2 777 aa16.42■□□□□ 0.22
VPS37B-204ENST00000543590 SZT2Q5T011 3432 aa16.41■□□□□ 0.22
VPS37B-204ENST00000543590 CCDC196A0A1B0GTZ2 297 aa16.41■□□□□ 0.22
VPS37B-204ENST00000543590 F2P00734 622 aa16.41■□□□□ 0.22
VPS37B-204ENST00000543590 PSEN2P49810 448 aa16.41■□□□□ 0.22
VPS37B-204ENST00000543590 NAPAP54920 295 aa16.41■□□□□ 0.22
VPS37B-204ENST00000543590 PTGISQ16647 500 aa16.41■□□□□ 0.22
VPS37B-204ENST00000543590 TYW1BQ6NUM6 668 aa16.41■□□□□ 0.22
VPS37B-204ENST00000543590 PSRC1Q6PGN9 363 aaPredicted RBP16.41■□□□□ 0.22
VPS37B-204ENST00000543590 SCLYQ96I15 445 aa16.41■□□□□ 0.22
VPS37B-204ENST00000543590 KATNAL1Q9BW62 490 aa16.41■□□□□ 0.22
VPS37B-204ENST00000543590 PCDHA6Q9UN73 950 aa16.41■□□□□ 0.22
VPS37B-204ENST00000543590 PCDHA8Q9Y5H6 950 aa16.41■□□□□ 0.22
VPS37B-204ENST00000543590 SPDYE3A6NKU9 549 aa16.4■□□□□ 0.22
VPS37B-204ENST00000543590 hCG_1984214I3L0E3 225 aa16.4■□□□□ 0.22
VPS37B-204ENST00000543590 HAS3O00219 553 aa16.4■□□□□ 0.22
VPS37B-204ENST00000543590 NEDD9Q14511 834 aa16.4■□□□□ 0.22
VPS37B-204ENST00000543590 MFSD10Q14728 455 aa16.4■□□□□ 0.22
VPS37B-204ENST00000543590 RASIP1Q5U651 963 aa16.4■□□□□ 0.22
VPS37B-204ENST00000543590 GDF6Q6KF10 455 aaPredicted RBP16.4■□□□□ 0.22
VPS37B-204ENST00000543590 NLRX1Q86UT6 975 aa16.4■□□□□ 0.22
VPS37B-204ENST00000543590 ZNF713Q8N859 430 aaPredicted RBP16.4■□□□□ 0.22
VPS37B-204ENST00000543590 C7orf31Q8N865 590 aa16.4■□□□□ 0.22
VPS37B-204ENST00000543590 ALG1Q9BT22 464 aa16.4■□□□□ 0.22
VPS37B-204ENST00000543590 NOD1Q9Y239 953 aa16.4■□□□□ 0.22
VPS37B-204ENST00000543590 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.39■□□□□ 0.21
VPS37B-204ENST00000543590 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.39■□□□□ 0.21
VPS37B-204ENST00000543590 STXBP3O00186 592 aa16.39■□□□□ 0.21
VPS37B-204ENST00000543590 FGBP02675 491 aa16.39■□□□□ 0.21
VPS37B-204ENST00000543590 KIAA0753Q2KHM9 967 aa16.39■□□□□ 0.21
VPS37B-204ENST00000543590 PPP1R18Q6NYC8 613 aa16.39■□□□□ 0.21
VPS37B-204ENST00000543590 METTL7BQ6UX53 244 aa16.39■□□□□ 0.21
VPS37B-204ENST00000543590 RUFY3Q7L099 469 aa16.39■□□□□ 0.21
VPS37B-204ENST00000543590 CYFIP1Q7L576 1253 aa16.39■□□□□ 0.21
VPS37B-204ENST00000543590 RPUSD2Q8IZ73 545 aaKnown RBP16.39■□□□□ 0.21
VPS37B-204ENST00000543590 CTAGE1Q96RT6 745 aa16.39■□□□□ 0.21
VPS37B-204ENST00000543590 C16orf70Q9BSU1 422 aa16.39■□□□□ 0.21
VPS37B-204ENST00000543590 ZSWIM6Q9HCJ5 1215 aa16.39■□□□□ 0.21
VPS37B-204ENST00000543590 RIC8AQ9NPQ8 531 aa16.39■□□□□ 0.21
VPS37B-204ENST00000543590 BARHL2Q9NY43 387 aa16.39■□□□□ 0.21
VPS37B-204ENST00000543590 HDAC6Q9UBN7 1215 aa16.39■□□□□ 0.21
VPS37B-204ENST00000543590 GTF2IRD1Q9UHL9 959 aa16.39■□□□□ 0.21
VPS37B-204ENST00000543590 PITPNM1O00562 1244 aa16.38■□□□□ 0.21
VPS37B-204ENST00000543590 ITGB5P18084 799 aa16.38■□□□□ 0.21
VPS37B-204ENST00000543590 ADCY7P51828 1080 aa16.38■□□□□ 0.21
VPS37B-204ENST00000543590 ZNF697Q5TEC3 545 aa16.38■□□□□ 0.21
VPS37B-204ENST00000543590 TEX2Q8IWB9 1127 aa16.38■□□□□ 0.21
VPS37B-204ENST00000543590 RETREG2Q8NC44 543 aa16.38■□□□□ 0.21
VPS37B-204ENST00000543590 HERVK_113Q902F9 699 aa16.38■□□□□ 0.21
VPS37B-204ENST00000543590 GPRASP2Q96D09 838 aa16.38■□□□□ 0.21
VPS37B-204ENST00000543590 VWCEQ96DN2 955 aa16.38■□□□□ 0.21
VPS37B-204ENST00000543590 SENP7Q9BQF6 1050 aa16.38■□□□□ 0.21
VPS37B-204ENST00000543590 UBIAD1Q9Y5Z9 338 aa16.38■□□□□ 0.21
VPS37B-204ENST00000543590 NID2Q14112 1375 aa16.38■□□□□ 0.21
VPS37B-204ENST00000543590 SMCO2A6NFE2 343 aa16.37■□□□□ 0.21
VPS37B-204ENST00000543590 NOP56O00567 594 aaKnown RBP16.37■□□□□ 0.21
VPS37B-204ENST00000543590 EVCP57679 992 aa16.37■□□□□ 0.21
VPS37B-204ENST00000543590 BFSP2Q13515 415 aa16.37■□□□□ 0.21
VPS37B-204ENST00000543590 PFKFB3Q16875 520 aaPredicted RBP16.37■□□□□ 0.21
VPS37B-204ENST00000543590 FAM161BQ96MY7 647 aa16.37■□□□□ 0.21
VPS37B-204ENST00000543590 TM6SF1Q9BZW5 370 aa16.37■□□□□ 0.21
VPS37B-204ENST00000543590 EHMT1Q9H9B1 1298 aa16.37■□□□□ 0.21
VPS37B-204ENST00000543590 CYP46A1Q9Y6A2 500 aa16.37■□□□□ 0.21
VPS37B-204ENST00000543590 FOSP01100 380 aaPredicted RBP16.36■□□□□ 0.21
VPS37B-204ENST00000543590 LGALS2P05162 132 aa16.36■□□□□ 0.21
VPS37B-204ENST00000543590 IQCF3P0C7M6 154 aa16.36■□□□□ 0.21
VPS37B-204ENST00000543590 SCG2P13521 617 aa16.36■□□□□ 0.21
VPS37B-204ENST00000543590 PDIA3P30101 505 aaKnown RBP16.36■□□□□ 0.21
VPS37B-204ENST00000543590 TOB2Q14106 344 aaPredicted RBP16.36■□□□□ 0.21
VPS37B-204ENST00000543590 OTOP2Q7RTS6 562 aa16.36■□□□□ 0.21
VPS37B-204ENST00000543590 GIMAP8Q8ND71 665 aaPredicted RBP16.36■□□□□ 0.21
VPS37B-204ENST00000543590 CDHR1Q96JP9 859 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms