RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 PCSK9Q8NBP7 692 aaKnown RBP13.05□□□□□ -0.32
COPS7A-217ENST00000543537 FERMT2Q96AC1 680 aa13.05□□□□□ -0.32
COPS7A-217ENST00000543537 LENG1Q96BZ8 264 aaPredicted RBP13.05□□□□□ -0.32
COPS7A-217ENST00000543537 TIGD1Q96MW7 591 aa13.05□□□□□ -0.32
COPS7A-217ENST00000543537 UBE2OQ9C0C9 1292 aaKnown RBP13.05□□□□□ -0.32
COPS7A-217ENST00000543537 GZF1Q9H116 711 aaPredicted RBP13.05□□□□□ -0.32
COPS7A-217ENST00000543537 RIOX1Q9H6W3 641 aa13.05□□□□□ -0.32
COPS7A-217ENST00000543537 SPC25Q9HBM1 224 aa13.05□□□□□ -0.32
COPS7A-217ENST00000543537 GPCPD1Q9NPB8 672 aa13.05□□□□□ -0.32
COPS7A-217ENST00000543537 PDLIM7Q9NR12 457 aa13.05□□□□□ -0.32
COPS7A-217ENST00000543537 BARHL2Q9NY43 387 aa13.05□□□□□ -0.32
COPS7A-217ENST00000543537 ADD3Q9UEY8 706 aaKnown RBP13.05□□□□□ -0.32
COPS7A-217ENST00000543537 MAD2L2Q9UI95 211 aa13.05□□□□□ -0.32
COPS7A-217ENST00000543537 GNEQ9Y223 722 aaKnown RBP13.05□□□□□ -0.32
COPS7A-217ENST00000543537 CNTNAP5Q8WYK1 1306 aa13.05□□□□□ -0.32
COPS7A-217ENST00000543537 LCTP09848 1927 aa13.05□□□□□ -0.32
COPS7A-217ENST00000543537 LTBP2Q14767 1821 aa13.04□□□□□ -0.32
COPS7A-217ENST00000543537 SOX1O00570 391 aaPredicted RBP13.04□□□□□ -0.32
COPS7A-217ENST00000543537 NFIBO00712 420 aa13.04□□□□□ -0.32
COPS7A-217ENST00000543537 CUTAO60888 179 aa13.04□□□□□ -0.32
COPS7A-217ENST00000543537 CCDC192P0DO97 292 aa13.04□□□□□ -0.32
COPS7A-217ENST00000543537 EDNRBP24530 442 aa13.04□□□□□ -0.32
COPS7A-217ENST00000543537 CDK7P50613 346 aa13.04□□□□□ -0.32
COPS7A-217ENST00000543537 GUCY1B3Q02153 619 aa13.04□□□□□ -0.32
COPS7A-217ENST00000543537 TLE2Q04725 743 aa13.04□□□□□ -0.32
COPS7A-217ENST00000543537 FAM160A1Q05DH4 1040 aa13.04□□□□□ -0.32
COPS7A-217ENST00000543537 KCNA10Q16322 511 aa13.04□□□□□ -0.32
COPS7A-217ENST00000543537 PKN1Q16512 942 aa13.04□□□□□ -0.32
COPS7A-217ENST00000543537 FOXD4L6Q3SYB3 417 aaPredicted RBP13.04□□□□□ -0.32
COPS7A-217ENST00000543537 IQSEC1Q6DN90 963 aa13.04□□□□□ -0.32
COPS7A-217ENST00000543537 TAPT1Q6NXT6 567 aa13.04□□□□□ -0.32
COPS7A-217ENST00000543537 KANK3Q6NY19 840 aa13.04□□□□□ -0.32
COPS7A-217ENST00000543537 FOXD4L3Q6VB84 417 aaPredicted RBP13.04□□□□□ -0.32
COPS7A-217ENST00000543537 DNERQ8NFT8 737 aa13.04□□□□□ -0.32
COPS7A-217ENST00000543537 MRPS27Q92552 414 aaKnown RBP13.04□□□□□ -0.32
COPS7A-217ENST00000543537 USP28Q96RU2 1077 aa13.04□□□□□ -0.32
COPS7A-217ENST00000543537 NUP62CLQ9H1M0 184 aa13.04□□□□□ -0.32
COPS7A-217ENST00000543537 VTA1Q9NP79 307 aa13.04□□□□□ -0.32
COPS7A-217ENST00000543537 FAM13BQ9NYF5 915 aa13.04□□□□□ -0.32
COPS7A-217ENST00000543537 PRKAG2Q9UGJ0 569 aa13.04□□□□□ -0.32
COPS7A-217ENST00000543537 USP25Q9UHP3 1055 aa13.04□□□□□ -0.32
COPS7A-217ENST00000543537 PCDHA4Q9UN74 947 aa13.04□□□□□ -0.32
COPS7A-217ENST00000543537 MTMR7Q9Y216 660 aa13.04□□□□□ -0.32
COPS7A-217ENST00000543537 ATP11BQ9Y2G3 1177 aa13.04□□□□□ -0.32
COPS7A-217ENST00000543537 LRRC37A2A6NM11 1700 aa13.03□□□□□ -0.32
COPS7A-217ENST00000543537 RBM47A0AV96 593 aaKnown RBP13.03□□□□□ -0.32
COPS7A-217ENST00000543537 MYADML2A6NDP7 307 aa13.03□□□□□ -0.32
COPS7A-217ENST00000543537 KIAA0355O15063 1070 aa13.03□□□□□ -0.32
COPS7A-217ENST00000543537 MRPL12P52815 198 aaKnown RBP13.03□□□□□ -0.32
COPS7A-217ENST00000543537 TNFAIP2Q03169 654 aa13.03□□□□□ -0.32
COPS7A-217ENST00000543537 BAATQ14032 418 aaPredicted RBP13.03□□□□□ -0.32
COPS7A-217ENST00000543537 ZRSR1Q15695 479 aaKnown RBP13.03□□□□□ -0.32
COPS7A-217ENST00000543537 ARL6IP4Q66PJ3 421 aaKnown RBP13.03□□□□□ -0.32
COPS7A-217ENST00000543537 NSMFQ6X4W1 530 aa13.03□□□□□ -0.32
COPS7A-217ENST00000543537 KRT25Q7Z3Z0 450 aa13.03□□□□□ -0.32
COPS7A-217ENST00000543537 RAB11FIP4Q86YS3 637 aa13.03□□□□□ -0.32
COPS7A-217ENST00000543537 KRI1Q8N9T8 703 aaKnown RBP13.03□□□□□ -0.32
COPS7A-217ENST00000543537 LBHD1Q9BQE6 289 aaPredicted RBP13.03□□□□□ -0.32
COPS7A-217ENST00000543537 SEZ6LQ9BYH1 1024 aa13.03□□□□□ -0.32
COPS7A-217ENST00000543537 TSPY26PQ9H489 355 aa13.03□□□□□ -0.32
COPS7A-217ENST00000543537 GDPD2Q9HCC8 539 aa13.03□□□□□ -0.32
COPS7A-217ENST00000543537 STARD7Q9NQZ5 370 aa13.03□□□□□ -0.32
COPS7A-217ENST00000543537 PNMA6FA0A0J9YX94 578 aa13.02□□□□□ -0.33
COPS7A-217ENST00000543537 FAM237AA0A1B0GTK4 181 aa13.02□□□□□ -0.33
COPS7A-217ENST00000543537 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.02□□□□□ -0.33
COPS7A-217ENST00000543537 TRIM43BA6NCK2 446 aa13.02□□□□□ -0.33
COPS7A-217ENST00000543537 BTBD18B2RXH4 712 aa13.02□□□□□ -0.33
COPS7A-217ENST00000543537 PLEKHA8P1O95397 391 aa13.02□□□□□ -0.33
COPS7A-217ENST00000543537 MYCNP04198 464 aaPredicted RBP13.02□□□□□ -0.33
COPS7A-217ENST00000543537 ASGR1P07306 291 aa13.02□□□□□ -0.33
COPS7A-217ENST00000543537 CLTBP09497 229 aa13.02□□□□□ -0.33
COPS7A-217ENST00000543537 C6orf222P0C671 652 aaPredicted RBP13.02□□□□□ -0.33
COPS7A-217ENST00000543537 ALDH5A1P51649 535 aaPredicted RBP13.02□□□□□ -0.33
COPS7A-217ENST00000543537 MDM2Q00987 491 aaPredicted RBP13.02□□□□□ -0.33
COPS7A-217ENST00000543537 GHRHRQ02643 423 aa13.02□□□□□ -0.33
COPS7A-217ENST00000543537 SEMA3FQ13275 785 aa13.02□□□□□ -0.33
COPS7A-217ENST00000543537 BLIDQ8IZY5 108 aa13.02□□□□□ -0.33
COPS7A-217ENST00000543537 CCDC82Q8N4S0 544 aa13.02□□□□□ -0.33
COPS7A-217ENST00000543537 SLC43A3Q8NBI5 491 aa13.02□□□□□ -0.33
COPS7A-217ENST00000543537 TRIM43Q96BQ3 446 aaPredicted RBP13.02□□□□□ -0.33
COPS7A-217ENST00000543537 MTMR8Q96EF0 704 aa13.02□□□□□ -0.33
COPS7A-217ENST00000543537 GLT1D1Q96MS3 346 aa13.02□□□□□ -0.33
COPS7A-217ENST00000543537 ZMYND12Q9H0C1 365 aa13.02□□□□□ -0.33
COPS7A-217ENST00000543537 TNMDQ9H2S6 317 aa13.02□□□□□ -0.33
COPS7A-217ENST00000543537 TMEM63CQ9P1W3 806 aa13.02□□□□□ -0.33
COPS7A-217ENST00000543537 MROH7Q68CQ1 1323 aa13.02□□□□□ -0.33
COPS7A-217ENST00000543537 CCDC194A0A1B0GVG4 234 aa13.01□□□□□ -0.33
COPS7A-217ENST00000543537 GADD45BO75293 160 aaPredicted RBP13.01□□□□□ -0.33
COPS7A-217ENST00000543537 CABYRO75952 493 aa13.01□□□□□ -0.33
COPS7A-217ENST00000543537 SMPD1P17405 629 aa13.01□□□□□ -0.33
COPS7A-217ENST00000543537 RPS6P62753 249 aaKnown RBP13.01□□□□□ -0.33
COPS7A-217ENST00000543537 FAAP100Q0VG06 881 aa13.01□□□□□ -0.33
COPS7A-217ENST00000543537 DUSP28Q4G0W2 176 aa13.01□□□□□ -0.33
COPS7A-217ENST00000543537 GNASQ5JWF2 1037 aa13.01□□□□□ -0.33
COPS7A-217ENST00000543537 RNF207Q6ZRF8 634 aa13.01□□□□□ -0.33
COPS7A-217ENST00000543537 ADGRF4Q8IZF3 695 aa13.01□□□□□ -0.33
COPS7A-217ENST00000543537 LRCH3Q96II8 777 aa13.01□□□□□ -0.33
COPS7A-217ENST00000543537 NAT10Q9H0A0 1025 aaKnown RBP13.01□□□□□ -0.33
COPS7A-217ENST00000543537 CLSTN2Q9H4D0 955 aa13.01□□□□□ -0.33
COPS7A-217ENST00000543537 GRPEL1Q9HAV7 217 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms