RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 STAG2Q8N3U4 1231 aa13.8□□□□□ -0.2
SMCR5-201ENST00000543475 USP38Q8NB14 1042 aa13.8□□□□□ -0.2
SMCR5-201ENST00000543475 C3orf20Q8ND61 904 aa13.8□□□□□ -0.2
SMCR5-201ENST00000543475 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.8□□□□□ -0.2
SMCR5-201ENST00000543475 TAF4BQ92750 862 aa13.8□□□□□ -0.2
SMCR5-201ENST00000543475 CALML4Q96GE6 196 aa13.8□□□□□ -0.2
SMCR5-201ENST00000543475 EDEM3Q9BZQ6 932 aa13.8□□□□□ -0.2
SMCR5-201ENST00000543475 VEZTQ9HBM0 779 aa13.8□□□□□ -0.2
SMCR5-201ENST00000543475 ABCB11O95342 1321 aa13.8□□□□□ -0.2
SMCR5-201ENST00000543475 TRAPPC3O43617 180 aa13.8□□□□□ -0.2
SMCR5-201ENST00000543475 CCNT1O60563 726 aaKnown RBP13.8□□□□□ -0.2
SMCR5-201ENST00000543475 TMOD1P28289 359 aa13.8□□□□□ -0.2
SMCR5-201ENST00000543475 TECP42680 631 aa13.8□□□□□ -0.2
SMCR5-201ENST00000543475 LETM2Q2VYF4 491 aa13.8□□□□□ -0.2
SMCR5-201ENST00000543475 WLSQ5T9L3 541 aa13.8□□□□□ -0.2
SMCR5-201ENST00000543475 ZNF34Q8IZ26 560 aa13.8□□□□□ -0.2
SMCR5-201ENST00000543475 FUKQ8N0W3 1084 aa13.8□□□□□ -0.2
SMCR5-201ENST00000543475 LRRC45Q96CN5 670 aa13.8□□□□□ -0.2
SMCR5-201ENST00000543475 SCLT1Q96NL6 688 aa13.8□□□□□ -0.2
SMCR5-201ENST00000543475 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.8□□□□□ -0.2
SMCR5-201ENST00000543475 OSBPL7Q9BZF2 842 aa13.8□□□□□ -0.2
SMCR5-201ENST00000543475 ISCUQ9H1K1 167 aa13.8□□□□□ -0.2
SMCR5-201ENST00000543475 MYH4Q9Y623 1939 aa13.8□□□□□ -0.2
SMCR5-201ENST00000543475 CASZ1Q86V15 1759 aa13.79□□□□□ -0.2
SMCR5-201ENST00000543475 ERVV-1B6SEH8 477 aa13.79□□□□□ -0.2
SMCR5-201ENST00000543475 DNM1LO00429 736 aa13.79□□□□□ -0.2
SMCR5-201ENST00000543475 SERPING1P05155 500 aa13.79□□□□□ -0.2
SMCR5-201ENST00000543475 PDHBP11177 359 aa13.79□□□□□ -0.2
SMCR5-201ENST00000543475 CYP19A1P11511 503 aaPredicted RBP13.79□□□□□ -0.2
SMCR5-201ENST00000543475 CCDC152Q4G0S7 254 aa13.79□□□□□ -0.2
SMCR5-201ENST00000543475 RUFY4Q6ZNE9 571 aa13.79□□□□□ -0.2
SMCR5-201ENST00000543475 SV2BQ7L1I2 683 aa13.79□□□□□ -0.2
SMCR5-201ENST00000543475 HAUS2Q9NVX0 235 aa13.79□□□□□ -0.2
SMCR5-201ENST00000543475 CACNA1SQ13698 1873 aa13.79□□□□□ -0.2
SMCR5-201ENST00000543475 RREB1Q92766 1687 aa13.79□□□□□ -0.2
SMCR5-201ENST00000543475 ERVK-9P63128 1117 aa13.79□□□□□ -0.2
SMCR5-201ENST00000543475 BIRC3Q13489 604 aa13.79□□□□□ -0.2
SMCR5-201ENST00000543475 CUL1Q13616 776 aa13.79□□□□□ -0.2
SMCR5-201ENST00000543475 QPCTQ16769 361 aa13.79□□□□□ -0.2
SMCR5-201ENST00000543475 KIAA0753Q2KHM9 967 aa13.79□□□□□ -0.2
SMCR5-201ENST00000543475 ANKRD20A8PQ5CZ79 823 aa13.79□□□□□ -0.2
SMCR5-201ENST00000543475 SUSD4Q5VX71 490 aa13.79□□□□□ -0.2
SMCR5-201ENST00000543475 GALNT17Q6IS24 598 aa13.79□□□□□ -0.2
SMCR5-201ENST00000543475 RCSD1Q6JBY9 416 aa13.79□□□□□ -0.2
SMCR5-201ENST00000543475 CACNA2D3Q8IZS8 1091 aa13.79□□□□□ -0.2
SMCR5-201ENST00000543475 SGSM3Q96HU1 749 aa13.79□□□□□ -0.2
SMCR5-201ENST00000543475 SEC16BQ96JE7 1060 aa13.79□□□□□ -0.2
SMCR5-201ENST00000543475 NUCKS1Q9H1E3 243 aaKnown RBP13.79□□□□□ -0.2
SMCR5-201ENST00000543475 SLC12A6Q9UHW9 1150 aa13.79□□□□□ -0.2
SMCR5-201ENST00000543475 PCDHGC5Q9Y5F6 944 aa13.79□□□□□ -0.2
SMCR5-201ENST00000543475 A0A1B0GUL6 1792 aa13.79□□□□□ -0.2
SMCR5-201ENST00000543475 TOGARAM1Q9Y4F4 1720 aa13.79□□□□□ -0.2
SMCR5-201ENST00000543475 TMCO5BA8MYB1 307 aa13.78□□□□□ -0.2
SMCR5-201ENST00000543475 ATP2C2O75185 946 aa13.78□□□□□ -0.2
SMCR5-201ENST00000543475 EZRP15311 586 aaKnown RBP13.78□□□□□ -0.2
SMCR5-201ENST00000543475 LRRC63Q05C16 580 aa13.78□□□□□ -0.2
SMCR5-201ENST00000543475 ZNF844Q08AG5 666 aa13.78□□□□□ -0.2
SMCR5-201ENST00000543475 DYMQ7RTS9 669 aa13.78□□□□□ -0.2
SMCR5-201ENST00000543475 DAGLBQ8NCG7 672 aa13.78□□□□□ -0.2
SMCR5-201ENST00000543475 PNMA1Q8ND90 353 aa13.78□□□□□ -0.2
SMCR5-201ENST00000543475 TBC1D5Q92609 795 aa13.78□□□□□ -0.2
SMCR5-201ENST00000543475 CEP72Q9P209 647 aa13.78□□□□□ -0.2
SMCR5-201ENST00000543475 MTMR7Q9Y216 660 aa13.78□□□□□ -0.2
SMCR5-201ENST00000543475 SHANK3Q9BYB0 1731 aa13.78□□□□□ -0.2
SMCR5-201ENST00000543475 KCNK3O14649 394 aa13.78□□□□□ -0.2
SMCR5-201ENST00000543475 CYP2D6P10635 497 aa13.78□□□□□ -0.2
SMCR5-201ENST00000543475 SCP2P22307 547 aa13.78□□□□□ -0.2
SMCR5-201ENST00000543475 ARID5AQ03989 594 aa13.78□□□□□ -0.2
SMCR5-201ENST00000543475 ENOX2Q16206 610 aaKnown RBP13.78□□□□□ -0.2
SMCR5-201ENST00000543475 SPRED3Q2MJR0 410 aa13.78□□□□□ -0.2
SMCR5-201ENST00000543475 GUF1Q8N442 669 aaKnown RBP13.78□□□□□ -0.2
SMCR5-201ENST00000543475 UBLCP1Q8WVY7 318 aaPredicted RBP13.78□□□□□ -0.2
SMCR5-201ENST00000543475 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.78□□□□□ -0.2
SMCR5-201ENST00000543475 LEMD3Q9Y2U8 911 aa13.78□□□□□ -0.2
SMCR5-201ENST00000543475 H0YGN5 161 aa13.77□□□□□ -0.2
SMCR5-201ENST00000543475 BACH1O14867 736 aa13.77□□□□□ -0.2
SMCR5-201ENST00000543475 TLR2O60603 784 aa13.77□□□□□ -0.2
SMCR5-201ENST00000543475 MYBP10242 640 aa13.77□□□□□ -0.2
SMCR5-201ENST00000543475 POLR2FP61218 127 aaKnown RBP13.77□□□□□ -0.2
SMCR5-201ENST00000543475 PPP2R2AP63151 447 aa13.77□□□□□ -0.2
SMCR5-201ENST00000543475 KCNMA1Q12791 1236 aa13.77□□□□□ -0.2
SMCR5-201ENST00000543475 UAP1Q16222 522 aaPredicted RBP13.77□□□□□ -0.2
SMCR5-201ENST00000543475 SLC4A8Q2Y0W8 1093 aa13.77□□□□□ -0.2
SMCR5-201ENST00000543475 FAM83BQ5T0W9 1011 aa13.77□□□□□ -0.2
SMCR5-201ENST00000543475 TMED8Q6PL24 325 aaPredicted RBP13.77□□□□□ -0.2
SMCR5-201ENST00000543475 UNC13DQ70J99 1090 aa13.77□□□□□ -0.2
SMCR5-201ENST00000543475 DDX42Q86XP3 938 aaKnown RBP eCLIP13.77□□□□□ -0.2
SMCR5-201ENST00000543475 EIF1ADQ8N9N8 165 aaKnown RBP13.77□□□□□ -0.2
SMCR5-201ENST00000543475 TSG101Q99816 390 aa13.77□□□□□ -0.2
SMCR5-201ENST00000543475 CARD10Q9BWT7 1032 aa13.77□□□□□ -0.2
SMCR5-201ENST00000543475 DCP1AQ9NPI6 582 aaPredicted RBP13.77□□□□□ -0.2
SMCR5-201ENST00000543475 ATP6V0A2Q9Y487 856 aa13.77□□□□□ -0.2
SMCR5-201ENST00000543475 NFS1Q9Y697 457 aa13.77□□□□□ -0.2
SMCR5-201ENST00000543475 ZNF804BA4D1E1 1349 aa13.77□□□□□ -0.2
SMCR5-201ENST00000543475 MYMKA6NI61 221 aa13.77□□□□□ -0.21
SMCR5-201ENST00000543475 SCTRP47872 440 aa13.77□□□□□ -0.21
SMCR5-201ENST00000543475 GNAQP50148 359 aa13.77□□□□□ -0.21
SMCR5-201ENST00000543475 RPS6KA1Q15418 735 aa13.77□□□□□ -0.21
SMCR5-201ENST00000543475 SLC18A3Q16572 532 aa13.77□□□□□ -0.21
SMCR5-201ENST00000543475 GKAP1Q5VSY0 366 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms