RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 KREMEN2Q8NCW0 462 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 C1orf162Q8NEQ5 155 aaPredicted RBP4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 CHTF18Q8WVB6 975 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 RNF141Q8WVD5 230 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 UBE2Q2Q8WVN8 375 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 ASIC4Q96FT7 647 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 MIPEPQ99797 713 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 DSCC1Q9BVC3 393 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 PRDM14Q9GZV8 571 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 PPCSQ9HAB8 311 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 PTPRHQ9HD43 1115 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 GFOD1Q9NXC2 390 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 B4GALT6Q9UBX8 382 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 COQ6Q9Y2Z9 468 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 DAAM1Q9Y4D1 1078 aa4.97□□□□□ -1.61
SFSWAP-211ENST00000542813 SMARCA2P51531 1590 aa4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 NCAPD3P42695 1498 aa4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 TRAF5O00463 557 aa4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 FGAP02671 866 aa4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 LTFP02788 710 aa4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 RBP3P10745 1247 aa4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 JUNBP17275 347 aaPredicted RBP4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 ETV3P41162 512 aa4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 HTR3AP46098 478 aa4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 KRT85P78386 507 aa4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 SNW1Q13573 536 aaKnown RBP4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 SAFBQ15424 915 aaKnown RBP eCLIP4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 ARHGAP29Q52LW3 1261 aa4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 TMEM177Q53S58 311 aa4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 COBLL1Q53SF7 1204 aa4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 INO80DQ53TQ3 878 aaPredicted RBP4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 OGFOD2Q6N063 350 aa4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 LETMD1Q6P1Q0 360 aa4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 RSPO2Q6UXX9 243 aaPredicted RBP4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 DYMQ7RTS9 669 aa4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 MORC1Q86VD1 984 aa4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 SMYD4Q8IYR2 804 aaPredicted RBP4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 CMTR2Q8IYT2 770 aaKnown RBP4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 CLRN3Q8NCR9 226 aa4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 AGBL5Q8NDL9 886 aa4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 GATA6Q92908 595 aa4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 TTC17Q96AE7 1141 aa4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 HSPBAP1Q96EW2 488 aa4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 FAXDC2Q96IV6 333 aa4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 LRGUKQ96M69 825 aa4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 AIFM3Q96NN9 605 aa4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 STRBPQ96SI9 672 aaKnown RBP4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 NAP1L4Q99733 375 aaKnown RBP4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 ELAC2Q9BQ52 826 aaKnown RBP4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 CELF4Q9BZC1 486 aaKnown RBP4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 ANLNQ9NQW6 1124 aa4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 C14orf119Q9NWQ9 140 aa4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 MRFAP1Q9Y605 127 aa4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 NESP48681 1621 aa4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 FRMPD2Q68DX3 1309 aaPredicted RBP4.96□□□□□ -1.62
SFSWAP-211ENST00000542813 RASSF10A6NK89 507 aa4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 FAM170BA6NMN3 283 aa4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 APAF1O14727 1248 aa4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 IL33O95760 270 aa4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 CKMP06732 381 aa4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 THBDP07204 575 aa4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 ASGR2P07307 311 aa4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 SRGAP2CP0DJJ0 459 aa4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 ATP2A2P16615 1042 aaKnown RBP4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 VCAM1P19320 739 aa4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 ASPAP45381 313 aa4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 CYP27A1Q02318 531 aa4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 POU5F1BQ06416 359 aa4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 DUSP27Q5VZP5 1158 aa4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 PGM2L1Q6PCE3 622 aa4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 CDH24Q86UP0 819 aa4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 SLC5A5Q92911 643 aa4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 NUP88Q99567 741 aaPredicted RBP4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 ALG1Q9BT22 464 aa4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 GSX1Q9H4S2 264 aaPredicted RBP4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 MAN1C1Q9NR34 630 aa4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 GPR27Q9NS67 375 aa4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 MKS1Q9NXB0 559 aa4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 BCCIPQ9P287 314 aaKnown RBP eCLIP4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 DDX20Q9UHI6 824 aaKnown RBP4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 SAP30BPQ9UHR5 308 aaKnown RBP4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 PUF60Q9UHX1 559 aaKnown RBP4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 PCOLCE2Q9UKZ9 415 aa4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 FAM50BQ9Y247 325 aa4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 ACTL7BQ9Y614 415 aa4.95□□□□□ -1.62
SFSWAP-211ENST00000542813 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 PTPDC1A2A3K4 754 aa4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 H0Y8X5 98 aa4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 STXBP3O00186 592 aa4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 NPHP1O15259 732 aa4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 MEFVO15553 781 aaPredicted RBP4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 XPOTO43592 962 aaKnown RBP4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 TCEA3O75764 348 aa4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 ITGB5P18084 799 aa4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 MECP2P51608 486 aaKnown RBP4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 IRX6P78412 446 aaPredicted RBP4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 POU4F1Q01851 419 aa4.94□□□□□ -1.62
SFSWAP-211ENST00000542813 PAK1Q13153 545 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms