RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 GRK4P32298 578 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 CYP2C19P33261 490 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 ZNF76P36508 570 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 PRPHP41219 470 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 ATP2C1P98194 919 aaPredicted RBP6.66□□□□□ -1.34
ABCF1-207ENST00000542772 SETQ01105 290 aaPredicted RBP6.66□□□□□ -1.34
ABCF1-207ENST00000542772 CACNB2Q08289 660 aaPredicted RBP6.66□□□□□ -1.34
ABCF1-207ENST00000542772 PTGDRQ13258 359 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 SLC39A14Q15043 492 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 ZNF174Q15697 407 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 GNPTABQ3T906 1256 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 TTC38Q5R3I4 469 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 PRAMEF19Q5SWL8 479 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 MFSD14CQ5VZR4 134 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 ANO1Q5XXA6 986 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 ARL6IP4Q66PJ3 421 aaKnown RBP6.66□□□□□ -1.34
ABCF1-207ENST00000542772 FBXO46Q6PJ61 603 aaPredicted RBP6.66□□□□□ -1.34
ABCF1-207ENST00000542772 PLA2G4DQ86XP0 818 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 LINC00301Q8NCQ3 95 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 GIMAP8Q8ND71 665 aaPredicted RBP6.66□□□□□ -1.34
ABCF1-207ENST00000542772 SLAIN1Q8ND83 568 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 TRPV1Q8NER1 839 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 ETNPPLQ8TBG4 499 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 RAET1EQ8TD07 263 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 HAS1Q92839 578 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 SLC5A5Q92911 643 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 ZFP91Q96JP5 570 aaPredicted RBP6.66□□□□□ -1.34
ABCF1-207ENST00000542772 CDHR1Q96JP9 859 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 ZNF396Q96N95 335 aaPredicted RBP6.66□□□□□ -1.34
ABCF1-207ENST00000542772 USP28Q96RU2 1077 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 RIT2Q99578 217 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 TMEM60Q9H2L4 133 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 AGO4Q9HCK5 861 aaKnown RBP6.66□□□□□ -1.34
ABCF1-207ENST00000542772 PDGFCQ9NRA1 345 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 TBC1D22BQ9NU19 505 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 DDX25Q9UHL0 483 aaKnown RBP6.66□□□□□ -1.34
ABCF1-207ENST00000542772 CFAP45Q9UL16 551 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 GNEQ9Y223 722 aaKnown RBP6.66□□□□□ -1.34
ABCF1-207ENST00000542772 DDX49Q9Y6V7 483 aaKnown RBP6.66□□□□□ -1.34
ABCF1-207ENST00000542772 NFASCO94856 1347 aa6.66□□□□□ -1.34
ABCF1-207ENST00000542772 LRRC37A2A6NM11 1700 aa6.65□□□□□ -1.34
ABCF1-207ENST00000542772 POTEFA5A3E0 1075 aa6.65□□□□□ -1.34
ABCF1-207ENST00000542772 NKRFO15226 690 aaKnown RBP eCLIP6.65□□□□□ -1.34
ABCF1-207ENST00000542772 SEPT4O43236 478 aa6.65□□□□□ -1.34
ABCF1-207ENST00000542772 SLC37A4O43826 429 aa6.65□□□□□ -1.34
ABCF1-207ENST00000542772 ARIH2O95376 493 aa6.65□□□□□ -1.34
ABCF1-207ENST00000542772 BAG4O95429 457 aaKnown RBP6.65□□□□□ -1.34
ABCF1-207ENST00000542772 YEATS4O95619 227 aa6.65□□□□□ -1.34
ABCF1-207ENST00000542772 HMGCRP04035 888 aa6.65□□□□□ -1.34
ABCF1-207ENST00000542772 KCNA2P16389 499 aa6.65□□□□□ -1.34
ABCF1-207ENST00000542772 CAPN2P17655 700 aa6.65□□□□□ -1.34
ABCF1-207ENST00000542772 DNM1Q05193 864 aaKnown RBP6.65□□□□□ -1.34
ABCF1-207ENST00000542772 SPIRE1Q08AE8 756 aa6.65□□□□□ -1.34
ABCF1-207ENST00000542772 TRIM32Q13049 653 aa6.65□□□□□ -1.34
ABCF1-207ENST00000542772 MTMR1Q13613 665 aa6.65□□□□□ -1.34
ABCF1-207ENST00000542772 NEDD9Q14511 834 aa6.65□□□□□ -1.34
ABCF1-207ENST00000542772 SF3A1Q15459 793 aaKnown RBP6.65□□□□□ -1.34
ABCF1-207ENST00000542772 IL17AQ16552 155 aa6.65□□□□□ -1.34
ABCF1-207ENST00000542772 CCDC144BQ3MJ40 725 aa6.65□□□□□ -1.34
ABCF1-207ENST00000542772 DUSP28Q4G0W2 176 aa6.65□□□□□ -1.34
ABCF1-207ENST00000542772 PRR16Q569H4 304 aa6.65□□□□□ -1.34
ABCF1-207ENST00000542772 TMEM63BQ5T3F8 832 aa6.65□□□□□ -1.34
ABCF1-207ENST00000542772 SLFN12Q8IYM2 578 aa6.65□□□□□ -1.34
ABCF1-207ENST00000542772 SCFD2Q8WU76 684 aa6.65□□□□□ -1.34
ABCF1-207ENST00000542772 TNPO1Q92973 898 aaKnown RBP6.65□□□□□ -1.34
ABCF1-207ENST00000542772 EMID1Q96A84 441 aaPredicted RBP6.65□□□□□ -1.34
ABCF1-207ENST00000542772 BCAS3Q9H6U6 928 aa6.65□□□□□ -1.34
ABCF1-207ENST00000542772 TFIP11Q9UBB9 837 aaKnown RBP6.65□□□□□ -1.34
ABCF1-207ENST00000542772 FAM184BQ9ULE4 1060 aa6.65□□□□□ -1.34
ABCF1-207ENST00000542772 PCDHA12Q9UN75 941 aa6.65□□□□□ -1.34
ABCF1-207ENST00000542772 CEP131Q9UPN4 1083 aa6.65□□□□□ -1.34
ABCF1-207ENST00000542772 CNPY2Q9Y2B0 182 aa6.65□□□□□ -1.34
ABCF1-207ENST00000542772 SRPRBQ9Y5M8 271 aaKnown RBP6.65□□□□□ -1.34
ABCF1-207ENST00000542772 CLIC4Q9Y696 253 aa6.65□□□□□ -1.34
ABCF1-207ENST00000542772 PTCH2Q9Y6C5 1203 aa6.65□□□□□ -1.34
ABCF1-207ENST00000542772 MYH15Q9Y2K3 1946 aa6.65□□□□□ -1.34
ABCF1-207ENST00000542772 IGKV6D-21A0A0A0MT36 114 aa6.64□□□□□ -1.35
ABCF1-207ENST00000542772 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.64□□□□□ -1.35
ABCF1-207ENST00000542772 IPO5O00410 1097 aaKnown RBP6.64□□□□□ -1.35
ABCF1-207ENST00000542772 CTAGE5O15320 804 aa6.64□□□□□ -1.35
ABCF1-207ENST00000542772 NEMFO60524 1076 aa6.64□□□□□ -1.35
ABCF1-207ENST00000542772 DUSP11O75319 330 aaKnown RBP6.64□□□□□ -1.35
ABCF1-207ENST00000542772 TXNP10599 105 aaKnown RBP6.64□□□□□ -1.35
ABCF1-207ENST00000542772 ELNP15502 786 aa6.64□□□□□ -1.35
ABCF1-207ENST00000542772 SMPD1P17405 629 aa6.64□□□□□ -1.35
ABCF1-207ENST00000542772 ATP2B1P20020 1258 aa6.64□□□□□ -1.35
ABCF1-207ENST00000542772 MCM7P33993 719 aa6.64□□□□□ -1.35
ABCF1-207ENST00000542772 ADCYAP1R1P41586 468 aa6.64□□□□□ -1.35
ABCF1-207ENST00000542772 FXR2P51116 673 aaKnown RBP eCLIP6.64□□□□□ -1.353e-6■■□□□ 14.2
ABCF1-207ENST00000542772 TNFAIP2Q03169 654 aa6.64□□□□□ -1.35
ABCF1-207ENST00000542772 ITGB3BPQ13352 177 aaPredicted RBP6.64□□□□□ -1.35
ABCF1-207ENST00000542772 PPP2R5CQ13362 524 aa6.64□□□□□ -1.35
ABCF1-207ENST00000542772 LAMC2Q13753 1193 aa6.64□□□□□ -1.35
ABCF1-207ENST00000542772 NBR1Q14596 966 aa6.64□□□□□ -1.35
ABCF1-207ENST00000542772 TTLL4Q14679 1199 aa6.64□□□□□ -1.35
ABCF1-207ENST00000542772 CALCRLQ16602 461 aa6.64□□□□□ -1.35
ABCF1-207ENST00000542772 LY6KQ17RY6 165 aa6.64□□□□□ -1.35
ABCF1-207ENST00000542772 CELF3Q5SZQ8 465 aaKnown RBP6.64□□□□□ -1.35
ABCF1-207ENST00000542772 FOXD4L5Q5VV16 416 aaPredicted RBP6.64□□□□□ -1.35
ABCF1-207ENST00000542772 LHX8Q68G74 356 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms