RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 SNRPB2P08579 225 aaKnown RBP3.97□□□□□ -1.77
KNTC1-213ENST00000542727 LTBRP36941 435 aa3.97□□□□□ -1.77
KNTC1-213ENST00000542727 BCL6P41182 706 aa3.97□□□□□ -1.77
KNTC1-213ENST00000542727 ADAM9Q13443 819 aa3.97□□□□□ -1.77
KNTC1-213ENST00000542727 LSAMPQ13449 338 aa3.97□□□□□ -1.77
KNTC1-213ENST00000542727 PKN3Q6P5Z2 889 aa3.97□□□□□ -1.77
KNTC1-213ENST00000542727 NLRP10Q86W26 655 aa3.97□□□□□ -1.77
KNTC1-213ENST00000542727 KISS1RQ969F8 398 aaPredicted RBP3.97□□□□□ -1.77
KNTC1-213ENST00000542727 ANAPC16Q96DE5 110 aa3.97□□□□□ -1.77
KNTC1-213ENST00000542727 YTHDC1Q96MU7 727 aaKnown RBP3.97□□□□□ -1.77
KNTC1-213ENST00000542727 TMEM168Q9H0V1 697 aa3.97□□□□□ -1.77
KNTC1-213ENST00000542727 EPN3Q9H201 632 aa3.97□□□□□ -1.77
KNTC1-213ENST00000542727 EPB41L1Q9H4G0 881 aa3.97□□□□□ -1.77
KNTC1-213ENST00000542727 ACTR10Q9NZ32 417 aa3.97□□□□□ -1.77
KNTC1-213ENST00000542727 CCDC9Q9Y3X0 531 aaKnown RBP3.97□□□□□ -1.77
KNTC1-213ENST00000542727 PCDHB4Q9Y5E5 795 aa3.97□□□□□ -1.77
KNTC1-213ENST00000542727 AKAP8O43823 692 aaKnown RBP3.96□□□□□ -1.78
KNTC1-213ENST00000542727 B4GALT3O60512 393 aa3.96□□□□□ -1.78
KNTC1-213ENST00000542727 TADA3O75528 432 aa3.96□□□□□ -1.78
KNTC1-213ENST00000542727 DGKIO75912 1065 aa3.96□□□□□ -1.78
KNTC1-213ENST00000542727 STAT5AP42229 794 aa3.96□□□□□ -1.78
KNTC1-213ENST00000542727 CYP4F3Q08477 520 aa3.96□□□□□ -1.78
KNTC1-213ENST00000542727 SV2CQ496J9 727 aa3.96□□□□□ -1.78
KNTC1-213ENST00000542727 STEAP3Q658P3 488 aa3.96□□□□□ -1.78
KNTC1-213ENST00000542727 ZNF227Q86WZ6 799 aa3.96□□□□□ -1.78
KNTC1-213ENST00000542727 CCDC103Q8IW40 242 aa3.96□□□□□ -1.78
KNTC1-213ENST00000542727 TRIM48Q8IWZ4 208 aa3.96□□□□□ -1.78
KNTC1-213ENST00000542727 PPIL6Q8IXY8 311 aa3.96□□□□□ -1.78
KNTC1-213ENST00000542727 KLHL36Q8N4N3 616 aa3.96□□□□□ -1.78
KNTC1-213ENST00000542727 BTN2A2Q8WVV5 523 aa3.96□□□□□ -1.78
KNTC1-213ENST00000542727 SEMA4AQ9H3S1 761 aa3.96□□□□□ -1.78
KNTC1-213ENST00000542727 CCSER2Q9H7U1 834 aa3.96□□□□□ -1.78
KNTC1-213ENST00000542727 LRP2BPQ9P2M1 347 aa3.96□□□□□ -1.78
KNTC1-213ENST00000542727 FTSJ1Q9UET6 329 aa3.96□□□□□ -1.78
KNTC1-213ENST00000542727 TCRBV5S2A0A599 114 aa3.95□□□□□ -1.78
KNTC1-213ENST00000542727 NPEPPSL1A6NEC2 478 aa3.95□□□□□ -1.78
KNTC1-213ENST00000542727 AGRPO00253 132 aa3.95□□□□□ -1.78
KNTC1-213ENST00000542727 KRIT1O00522 736 aa3.95□□□□□ -1.78
KNTC1-213ENST00000542727 SUSD5O60279 629 aa3.95□□□□□ -1.78
KNTC1-213ENST00000542727 CHGBP05060 677 aa3.95□□□□□ -1.78
KNTC1-213ENST00000542727 ITGAVP06756 1048 aa3.95□□□□□ -1.78
KNTC1-213ENST00000542727 ATF4P18848 351 aaPredicted RBP3.95□□□□□ -1.78
KNTC1-213ENST00000542727 IL13P35225 146 aa3.95□□□□□ -1.78
KNTC1-213ENST00000542727 ECI1P42126 302 aa3.95□□□□□ -1.78
KNTC1-213ENST00000542727 GDF5P43026 501 aa3.95□□□□□ -1.78
KNTC1-213ENST00000542727 EPHB4P54760 987 aa3.95□□□□□ -1.78
KNTC1-213ENST00000542727 GFRA1P56159 465 aa3.95□□□□□ -1.78
KNTC1-213ENST00000542727 SLFN13Q68D06 897 aa3.95□□□□□ -1.78
KNTC1-213ENST00000542727 TEPPQ6URK8 271 aa3.95□□□□□ -1.78
KNTC1-213ENST00000542727 C6orf15Q6UXA7 325 aaPredicted RBP3.95□□□□□ -1.78
KNTC1-213ENST00000542727 ARHGEF18Q6ZSZ5 1173 aa3.95□□□□□ -1.78
KNTC1-213ENST00000542727 USP51Q70EK9 711 aa3.95□□□□□ -1.78
KNTC1-213ENST00000542727 STK32CQ86UX6 486 aa3.95□□□□□ -1.78
KNTC1-213ENST00000542727 CIR1Q86X95 450 aaPredicted RBP3.95□□□□□ -1.78
KNTC1-213ENST00000542727 VPS37DQ86XT2 251 aa3.95□□□□□ -1.78
KNTC1-213ENST00000542727 FAM178BQ8IXR5 827 aa3.95□□□□□ -1.78
KNTC1-213ENST00000542727 KREMEN2Q8NCW0 462 aa3.95□□□□□ -1.78
KNTC1-213ENST00000542727 RCBTB1Q8NDN9 531 aa3.95□□□□□ -1.78
KNTC1-213ENST00000542727 TTLL11Q8NHH1 800 aa3.95□□□□□ -1.78
KNTC1-213ENST00000542727 MRRFQ96E11 262 aaKnown RBP3.95□□□□□ -1.78
KNTC1-213ENST00000542727 SMOC1Q9H4F8 434 aa3.95□□□□□ -1.78
KNTC1-213ENST00000542727 BARX1Q9HBU1 254 aaPredicted RBP3.95□□□□□ -1.78
KNTC1-213ENST00000542727 CAPN10Q9HC96 672 aa3.95□□□□□ -1.78
KNTC1-213ENST00000542727 PPP4R1LQ9P1A2 415 aa3.95□□□□□ -1.78
KNTC1-213ENST00000542727 NUB1Q9Y5A7 615 aa3.95□□□□□ -1.78
KNTC1-213ENST00000542727 CYR61O00622 381 aa3.94□□□□□ -1.78
KNTC1-213ENST00000542727 TACR2P21452 398 aa3.94□□□□□ -1.78
KNTC1-213ENST00000542727 KCNJ6P48051 423 aa3.94□□□□□ -1.78
KNTC1-213ENST00000542727 PPP2CBP62714 309 aa3.94□□□□□ -1.78
KNTC1-213ENST00000542727 PPP2CAP67775 309 aa3.94□□□□□ -1.78
KNTC1-213ENST00000542727 FXNQ16595 210 aa3.94□□□□□ -1.78
KNTC1-213ENST00000542727 SLC16A11Q8NCK7 471 aa3.94□□□□□ -1.78
KNTC1-213ENST00000542727 ARRDC4Q8NCT1 418 aa3.94□□□□□ -1.78
KNTC1-213ENST00000542727 DNERQ8NFT8 737 aa3.94□□□□□ -1.78
KNTC1-213ENST00000542727 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.94□□□□□ -1.78
KNTC1-213ENST00000542727 MBD6Q96DN6 1003 aa3.94□□□□□ -1.78
KNTC1-213ENST00000542727 CHAMP1Q96JM3 812 aa3.94□□□□□ -1.78
KNTC1-213ENST00000542727 SYT3Q9BQG1 590 aa3.94□□□□□ -1.78
KNTC1-213ENST00000542727 CLDND1Q9NY35 253 aa3.94□□□□□ -1.78
KNTC1-213ENST00000542727 MYOTQ9UBF9 498 aa3.94□□□□□ -1.78
KNTC1-213ENST00000542727 TMEFF2Q9UIK5 374 aaPredicted RBP3.94□□□□□ -1.78
KNTC1-213ENST00000542727 PCDHA2Q9Y5H9 948 aa3.94□□□□□ -1.78
KNTC1-213ENST00000542727 NPFFR2Q9Y5X5 522 aa3.94□□□□□ -1.78
KNTC1-213ENST00000542727 SMAD7O15105 426 aaKnown RBP3.93□□□□□ -1.78
KNTC1-213ENST00000542727 SSBP05455 408 aaKnown RBP eCLIP3.93□□□□□ -1.78
KNTC1-213ENST00000542727 C6P13671 934 aa3.93□□□□□ -1.78
KNTC1-213ENST00000542727 SELENOPP49908 381 aa3.93□□□□□ -1.78
KNTC1-213ENST00000542727 MAP4K2Q12851 820 aa3.93□□□□□ -1.78
KNTC1-213ENST00000542727 SLC35F1Q5T1Q4 408 aa3.93□□□□□ -1.78
KNTC1-213ENST00000542727 LARP1BQ659C4 914 aaKnown RBP3.93□□□□□ -1.78
KNTC1-213ENST00000542727 EEPD1Q7L9B9 569 aa3.93□□□□□ -1.78
KNTC1-213ENST00000542727 LIMS2Q7Z4I7 341 aa3.93□□□□□ -1.78
KNTC1-213ENST00000542727 KBTBD2Q8IY47 623 aa3.93□□□□□ -1.78
KNTC1-213ENST00000542727 SH3RF3Q8TEJ3 882 aaPredicted RBP3.93□□□□□ -1.78
KNTC1-213ENST00000542727 ZCCHC14Q8WYQ9 949 aaKnown RBP3.93□□□□□ -1.78
KNTC1-213ENST00000542727 KCTD13Q8WZ19 329 aa3.93□□□□□ -1.78
KNTC1-213ENST00000542727 SORCS2Q96PQ0 1159 aa3.93□□□□□ -1.78
KNTC1-213ENST00000542727 KLC2Q9H0B6 622 aa3.93□□□□□ -1.78
KNTC1-213ENST00000542727 ACBD3Q9H3P7 528 aa3.93□□□□□ -1.78
KNTC1-213ENST00000542727 CD248Q9HCU0 757 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms