RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 SEC31AO94979 1220 aaKnown RBP7.27□□□□□ -1.25
PTPRO-208ENST00000542557 LCA5LO95447 670 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 SLC16A2P36021 539 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 KLK7P49862 253 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 VAV2P52735 878 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 COASYQ13057 564 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 CDC37Q16543 378 aaPredicted RBP7.27□□□□□ -1.25
PTPRO-208ENST00000542557 CCDC122Q5T0U0 273 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 TMEM179Q6ZVK1 233 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 DYMQ7RTS9 669 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 KIAA1328Q86T90 577 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 MYOCDQ8IZQ8 938 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 GMCL1P1Q8NEA9 526 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 CRYGNQ8WXF5 182 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 RPGRIP1Q96KN7 1286 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 ANO3Q9BYT9 981 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 BMP2KQ9NSY1 1161 aaPredicted RBP7.27□□□□□ -1.25
PTPRO-208ENST00000542557 FAM198AQ9UFP1 575 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 PUF60Q9UHX1 559 aaKnown RBP7.27□□□□□ -1.25
PTPRO-208ENST00000542557 SERPINA10Q9UK55 444 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 SYNPO2Q9UMS6 1093 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 GUCA1BQ9UMX6 200 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 SCN9AQ15858 1988 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 RGPD3A6NKT7 1758 aaPredicted RBP7.27□□□□□ -1.25
PTPRO-208ENST00000542557 RGPD4Q7Z3J3 1758 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 FRMD3A2A2Y4 597 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 MAP2K7O14733 419 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 TBX3O15119 743 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 ERLIN1O75477 346 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 SASH3O75995 380 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 EEF2P13639 858 aaKnown RBP7.27□□□□□ -1.25
PTPRO-208ENST00000542557 SLC1A4P43007 532 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 ECM1Q16610 540 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 LONRF2Q1L5Z9 754 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 CERKLQ49MI3 558 aaPredicted RBP7.27□□□□□ -1.25
PTPRO-208ENST00000542557 FAM26FQ5R3K3 315 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 DACT2Q5SW24 774 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 SLFN13Q68D06 897 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 ZFPM1Q8IX07 1006 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 SLFN12Q8IYM2 578 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 GMCL1Q96IK5 515 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 PCMTD1Q96MG8 357 aaPredicted RBP7.27□□□□□ -1.25
PTPRO-208ENST00000542557 CEP63Q96MT8 703 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 FUT8Q9BYC5 575 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 GBP3Q9H0R5 595 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 TRIM10Q9UDY6 481 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 STK24Q9Y6E0 443 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 ATAD5Q96QE3 1844 aa7.27□□□□□ -1.25
PTPRO-208ENST00000542557 PITPNM2Q9BZ72 1349 aa7.26□□□□□ -1.25
PTPRO-208ENST00000542557 MARCH6O60337 910 aa7.26□□□□□ -1.25
PTPRO-208ENST00000542557 GNA14O95837 355 aa7.26□□□□□ -1.25
PTPRO-208ENST00000542557 MMP10P09238 476 aa7.26□□□□□ -1.25
PTPRO-208ENST00000542557 IDEP14735 1019 aa7.26□□□□□ -1.25
PTPRO-208ENST00000542557 MMP14P50281 582 aa7.26□□□□□ -1.25
PTPRO-208ENST00000542557 MARSP56192 900 aaKnown RBP7.26□□□□□ -1.25
PTPRO-208ENST00000542557 FKBP3Q00688 224 aaKnown RBP7.26□□□□□ -1.25
PTPRO-208ENST00000542557 ATP2B2Q01814 1243 aa7.26□□□□□ -1.25
PTPRO-208ENST00000542557 ICA1Q05084 483 aa7.26□□□□□ -1.25
PTPRO-208ENST00000542557 CKAP4Q07065 602 aaKnown RBP7.26□□□□□ -1.25
PTPRO-208ENST00000542557 HAUS3Q68CZ6 603 aa7.26□□□□□ -1.25
PTPRO-208ENST00000542557 STYK1Q6J9G0 422 aa7.26□□□□□ -1.25
PTPRO-208ENST00000542557 CCDC65Q8IXS2 484 aa7.26□□□□□ -1.25
PTPRO-208ENST00000542557 ZC3H3Q8IXZ2 948 aaKnown RBP7.26□□□□□ -1.25
PTPRO-208ENST00000542557 PCDHA1Q9Y5I3 950 aa7.26□□□□□ -1.25
PTPRO-208ENST00000542557 DDTLA6NHG4 134 aaPredicted RBP7.26□□□□□ -1.25
PTPRO-208ENST00000542557 NKRFO15226 690 aaKnown RBP eCLIP7.26□□□□□ -1.25
PTPRO-208ENST00000542557 SPA17Q15506 151 aa7.26□□□□□ -1.25
PTPRO-208ENST00000542557 Q4G0T1 1027 aa7.26□□□□□ -1.25
PTPRO-208ENST00000542557 BEND6Q5SZJ8 279 aaPredicted RBP7.26□□□□□ -1.25
PTPRO-208ENST00000542557 WDR93Q6P2C0 686 aa7.26□□□□□ -1.25
PTPRO-208ENST00000542557 SH3BP5LQ7L8J4 393 aa7.26□□□□□ -1.25
PTPRO-208ENST00000542557 EEF2KMTQ96G04 330 aa7.26□□□□□ -1.25
PTPRO-208ENST00000542557 CCDC42Q96M95 316 aa7.26□□□□□ -1.25
PTPRO-208ENST00000542557 ZSWIM4Q9H7M6 989 aa7.26□□□□□ -1.25
PTPRO-208ENST00000542557 DBNDD1Q9H9R9 158 aa7.26□□□□□ -1.25
PTPRO-208ENST00000542557 IGSF5Q9NSI5 407 aa7.26□□□□□ -1.25
PTPRO-208ENST00000542557 PANK4Q9NVE7 773 aa7.26□□□□□ -1.25
PTPRO-208ENST00000542557 PCDHA2Q9Y5H9 948 aa7.26□□□□□ -1.25
PTPRO-208ENST00000542557 COL4A3BPQ9Y5P4 624 aa7.26□□□□□ -1.25
PTPRO-208ENST00000542557 SAR1BQ9Y6B6 198 aa7.26□□□□□ -1.25
PTPRO-208ENST00000542557 PSME4Q14997 1843 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 MEIS2O14770 477 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 ECE2O60344 883 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 ENTPD3O75355 529 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 FOSP01100 380 aaPredicted RBP7.25□□□□□ -1.25
PTPRO-208ENST00000542557 ATP1A1P05023 1023 aaKnown RBP7.25□□□□□ -1.25
PTPRO-208ENST00000542557 PLA2G4BP0C869 781 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 KIF5AQ12840 1032 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 SIAH1Q8IUQ4 282 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 ETNPPLQ8TBG4 499 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 BAP1Q92560 729 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 PNKPQ96T60 521 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 AMNQ9BXJ7 453 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 TRIM34Q9BYJ4 488 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 NUCKS1Q9H1E3 243 aaKnown RBP7.25□□□□□ -1.25
PTPRO-208ENST00000542557 ARHGAP20Q9P2F6 1191 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 SSU72P8A0A1W2PR75 194 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 RCCD1A6NED2 376 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 USP17L15C9J2P7 530 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 USP17L13C9JLJ4 530 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms