RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-211ENST00000542555 MSRAQ9UJ68 235 aa9.7□□□□□ -0.86
CLPB-211ENST00000542555 PALD1Q9ULE6 856 aa9.7□□□□□ -0.86
CLPB-211ENST00000542555 A0A0C4DFX4 3053 aa9.69□□□□□ -0.86
CLPB-211ENST00000542555 TRIM43BA6NCK2 446 aa9.69□□□□□ -0.86
CLPB-211ENST00000542555 PQBP1O60828 265 aaKnown RBP9.69□□□□□ -0.86
CLPB-211ENST00000542555 FLT1P17948 1338 aa9.69□□□□□ -0.86
CLPB-211ENST00000542555 G3BP1Q13283 466 aaKnown RBP eCLIP9.69□□□□□ -0.86
CLPB-211ENST00000542555 PPIGQ13427 754 aaKnown RBP eCLIP9.69□□□□□ -0.86
CLPB-211ENST00000542555 PLS1Q14651 629 aa9.69□□□□□ -0.86
CLPB-211ENST00000542555 COG2Q14746 738 aa9.69□□□□□ -0.86
CLPB-211ENST00000542555 SNX17Q15036 470 aa9.69□□□□□ -0.86
CLPB-211ENST00000542555 ABCB5Q2M3G0 1257 aa9.69□□□□□ -0.86
CLPB-211ENST00000542555 CCDC158Q5M9N0 1113 aa9.69□□□□□ -0.86
CLPB-211ENST00000542555 TTC39AQ5SRH9 613 aa9.69□□□□□ -0.86
CLPB-211ENST00000542555 LBX2Q6XYB7 198 aa9.69□□□□□ -0.86
CLPB-211ENST00000542555 SLC44A5Q8NCS7 719 aa9.69□□□□□ -0.86
CLPB-211ENST00000542555 SHCBP1Q8NEM2 672 aa9.69□□□□□ -0.86
CLPB-211ENST00000542555 TRIM43Q96BQ3 446 aaPredicted RBP9.69□□□□□ -0.86
CLPB-211ENST00000542555 KIAA1683Q9H0B3 1180 aa9.69□□□□□ -0.86
CLPB-211ENST00000542555 MROH8Q9H579 483 aa9.69□□□□□ -0.86
CLPB-211ENST00000542555 SMC4Q9NTJ3 1288 aa9.69□□□□□ -0.86
CLPB-211ENST00000542555 MROH7Q68CQ1 1323 aa9.68□□□□□ -0.86
CLPB-211ENST00000542555 KIAA0355O15063 1070 aa9.68□□□□□ -0.86
CLPB-211ENST00000542555 SRGAP3O43295 1099 aa9.68□□□□□ -0.86
CLPB-211ENST00000542555 GNAI3P08754 354 aa9.68□□□□□ -0.86
CLPB-211ENST00000542555 FCER1AP12319 257 aa9.68□□□□□ -0.86
CLPB-211ENST00000542555 VCAM1P19320 739 aa9.68□□□□□ -0.86
CLPB-211ENST00000542555 RAB30Q15771 203 aa9.68□□□□□ -0.86
CLPB-211ENST00000542555 ALDH1L2Q3SY69 923 aa9.68□□□□□ -0.86
CLPB-211ENST00000542555 CERKLQ49MI3 558 aaPredicted RBP9.68□□□□□ -0.86
CLPB-211ENST00000542555 CCDC184Q52MB2 194 aa9.68□□□□□ -0.86
CLPB-211ENST00000542555 NCAPG2Q86XI2 1143 aa9.68□□□□□ -0.86
CLPB-211ENST00000542555 TMEM199Q8N511 208 aa9.68□□□□□ -0.86
CLPB-211ENST00000542555 MB21D1Q8N884 522 aa9.68□□□□□ -0.86
CLPB-211ENST00000542555 TRPV1Q8NER1 839 aa9.68□□□□□ -0.86
CLPB-211ENST00000542555 VTI1AQ96AJ9 217 aa9.68□□□□□ -0.86
CLPB-211ENST00000542555 API5Q9BZZ5 524 aaKnown RBP9.68□□□□□ -0.86
CLPB-211ENST00000542555 TANGO6Q9C0B7 1094 aa9.68□□□□□ -0.86
CLPB-211ENST00000542555 RPAP3Q9H6T3 665 aaPredicted RBP9.68□□□□□ -0.86
CLPB-211ENST00000542555 NRBP1Q9UHY1 535 aa9.68□□□□□ -0.86
CLPB-211ENST00000542555 SERPINB13Q9UIV8 391 aa9.68□□□□□ -0.86
CLPB-211ENST00000542555 NAGPAQ9UK23 515 aa9.68□□□□□ -0.86
CLPB-211ENST00000542555 RBM19Q9Y4C8 960 aaKnown RBP9.68□□□□□ -0.86
CLPB-211ENST00000542555 TLR3O15455 904 aaKnown RBP9.67□□□□□ -0.86
CLPB-211ENST00000542555 ANP32CO43423 234 aa9.67□□□□□ -0.86
CLPB-211ENST00000542555 COBLO75128 1261 aa9.67□□□□□ -0.86
CLPB-211ENST00000542555 CNMDO75829 334 aa9.67□□□□□ -0.86
CLPB-211ENST00000542555 CPB1P15086 417 aa9.67□□□□□ -0.86
CLPB-211ENST00000542555 ERCC3P19447 782 aa9.67□□□□□ -0.86
CLPB-211ENST00000542555 NFKB1P19838 968 aa9.67□□□□□ -0.86
CLPB-211ENST00000542555 ARID4AP29374 1257 aaPredicted RBP9.67□□□□□ -0.86
CLPB-211ENST00000542555 NOS3P29474 1203 aa9.67□□□□□ -0.86
CLPB-211ENST00000542555 CCINQ13939 588 aa9.67□□□□□ -0.86
CLPB-211ENST00000542555 CCDC85BQ15834 202 aaPredicted RBP9.67□□□□□ -0.86
CLPB-211ENST00000542555 IGF2-ASQ6U949 168 aa9.67□□□□□ -0.86
CLPB-211ENST00000542555 PRR23CQ6ZRP0 262 aa9.67□□□□□ -0.86
CLPB-211ENST00000542555 METTL16Q86W50 562 aaKnown RBP9.67□□□□□ -0.86
CLPB-211ENST00000542555 WFDC8Q8IUA0 241 aa9.67□□□□□ -0.86
CLPB-211ENST00000542555 ALDH16A1Q8IZ83 802 aa9.67□□□□□ -0.86
CLPB-211ENST00000542555 ABRAQ8N0Z2 381 aa9.67□□□□□ -0.86
CLPB-211ENST00000542555 USP38Q8NB14 1042 aa9.67□□□□□ -0.86
CLPB-211ENST00000542555 SSH1Q8WYL5 1049 aa9.67□□□□□ -0.86
CLPB-211ENST00000542555 MOV10L1Q9BXT6 1211 aaKnown RBP9.67□□□□□ -0.86
CLPB-211ENST00000542555 GSX2Q9BZM3 304 aa9.67□□□□□ -0.86
CLPB-211ENST00000542555 SPATC1LQ9H0A9 340 aa9.67□□□□□ -0.86
CLPB-211ENST00000542555 PRDM12Q9H4Q4 367 aa9.67□□□□□ -0.86
CLPB-211ENST00000542555 SLC28A3Q9HAS3 691 aa9.67□□□□□ -0.86
CLPB-211ENST00000542555 SPC25Q9HBM1 224 aa9.67□□□□□ -0.86
CLPB-211ENST00000542555 STARD7Q9NQZ5 370 aa9.67□□□□□ -0.86
CLPB-211ENST00000542555 BTBD7Q9P203 1132 aa9.67□□□□□ -0.86
CLPB-211ENST00000542555 RAPGEFL1Q9UHV5 662 aa9.67□□□□□ -0.86
CLPB-211ENST00000542555 CNPY2Q9Y2B0 182 aa9.67□□□□□ -0.86
CLPB-211ENST00000542555 LTBP2Q14767 1821 aa9.67□□□□□ -0.86
CLPB-211ENST00000542555 LAMA3Q16787 3333 aa9.66□□□□□ -0.86
CLPB-211ENST00000542555 FRMPD3Q5JV73 1810 aa9.66□□□□□ -0.86
CLPB-211ENST00000542555 E9PSI1 815 aa9.66□□□□□ -0.86
CLPB-211ENST00000542555 MPHOSPH10O00566 681 aaKnown RBP9.66□□□□□ -0.86
CLPB-211ENST00000542555 SLC25A27O95847 323 aa9.66□□□□□ -0.86
CLPB-211ENST00000542555 AKR1A1P14550 325 aa9.66□□□□□ -0.86
CLPB-211ENST00000542555 JAG1P78504 1218 aa9.66□□□□□ -0.86
CLPB-211ENST00000542555 OS9Q13438 667 aaPredicted RBP9.66□□□□□ -0.86
CLPB-211ENST00000542555 KCTD2Q14681 263 aa9.66□□□□□ -0.86
CLPB-211ENST00000542555 FAM47AQ5JRC9 791 aa9.66□□□□□ -0.86
CLPB-211ENST00000542555 PRAMEF19Q5SWL8 479 aa9.66□□□□□ -0.86
CLPB-211ENST00000542555 PSRC1Q6PGN9 363 aaPredicted RBP9.66□□□□□ -0.86
CLPB-211ENST00000542555 FAM9BQ8IZU0 186 aa9.66□□□□□ -0.86
CLPB-211ENST00000542555 ZNF384Q8TF68 577 aa9.66□□□□□ -0.86
CLPB-211ENST00000542555 TOX2Q96NM4 488 aa9.66□□□□□ -0.86
CLPB-211ENST00000542555 ALG2Q9H553 416 aa9.66□□□□□ -0.86
CLPB-211ENST00000542555 SH2D4AQ9H788 454 aa9.66□□□□□ -0.86
CLPB-211ENST00000542555 DNAJC18Q9H819 358 aa9.66□□□□□ -0.86
CLPB-211ENST00000542555 A0A1W2PQ45 241 aaPredicted RBP9.65□□□□□ -0.86
CLPB-211ENST00000542555 A0A1W2PQY0 241 aa9.65□□□□□ -0.86
CLPB-211ENST00000542555 PGK1P00558 417 aa9.65□□□□□ -0.86
CLPB-211ENST00000542555 TIMP1P01033 207 aa9.65□□□□□ -0.86
CLPB-211ENST00000542555 POLR3DP05423 398 aaPredicted RBP9.65□□□□□ -0.86
CLPB-211ENST00000542555 CYP7A1P22680 504 aa9.65□□□□□ -0.86
CLPB-211ENST00000542555 MCAMP43121 646 aa9.65□□□□□ -0.86
CLPB-211ENST00000542555 MFSD5Q6N075 450 aa9.65□□□□□ -0.86
CLPB-211ENST00000542555 TATDN1Q6P1N9 297 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms