RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 TBC1D7Q9P0N9 293 aa8.86□□□□□ -0.99
PDLIM5-221ENST00000542407 ZNF202O95125 648 aa8.86□□□□□ -0.99
PDLIM5-221ENST00000542407 AKR1B1P15121 316 aa8.86□□□□□ -0.99
PDLIM5-221ENST00000542407 PTPREP23469 700 aa8.86□□□□□ -0.99
PDLIM5-221ENST00000542407 STIP1P31948 543 aaKnown RBP8.86□□□□□ -0.99
PDLIM5-221ENST00000542407 KCNJ6P48051 423 aa8.86□□□□□ -0.99
PDLIM5-221ENST00000542407 SNX1Q13596 522 aa8.86□□□□□ -0.99
PDLIM5-221ENST00000542407 KLHL10Q6JEL2 608 aa8.86□□□□□ -0.99
PDLIM5-221ENST00000542407 KIAA0825Q8IV33 1275 aa8.86□□□□□ -0.99
PDLIM5-221ENST00000542407 TRIML1Q8N9V2 468 aa8.86□□□□□ -0.99
PDLIM5-221ENST00000542407 DPF2Q92785 391 aa8.86□□□□□ -0.99
PDLIM5-221ENST00000542407 PNKPQ96T60 521 aa8.86□□□□□ -0.99
PDLIM5-221ENST00000542407 BAG1Q99933 345 aaPredicted RBP8.86□□□□□ -0.99
PDLIM5-221ENST00000542407 JPH2Q9BR39 696 aaPredicted RBP8.86□□□□□ -0.99
PDLIM5-221ENST00000542407 IDI2Q9BXS1 227 aa8.86□□□□□ -0.99
PDLIM5-221ENST00000542407 EHD4Q9H223 541 aa8.86□□□□□ -0.99
PDLIM5-221ENST00000542407 CABP5Q9NP86 173 aa8.86□□□□□ -0.99
PDLIM5-221ENST00000542407 FAM198AQ9UFP1 575 aa8.86□□□□□ -0.99
PDLIM5-221ENST00000542407 G3V3G9 751 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 PECAM1P16284 738 aaPredicted RBP8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 HNRNPH1P31943 449 aaKnown RBP8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 PRPHP41219 470 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 GJA8P48165 433 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 DBN1Q16643 649 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 ACBD5Q5T8D3 534 aaPredicted RBP8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 SH3BP5LQ7L8J4 393 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 DHRS1Q96LJ7 313 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 SPZ1Q9BXG8 430 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 SEZ6LQ9BYH1 1024 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 LZTFL1Q9NQ48 299 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 SH3GLB2Q9NR46 395 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 IGSF5Q9NSI5 407 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 MTMR4Q9NYA4 1195 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 STX8Q9UNK0 236 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 BRCA1P38398 1863 aaKnown RBP8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 TMEM232C9JQI7 657 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 RPS6KA5O75582 802 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 SNHG28P0DPA3 235 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 CCT5P48643 541 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 CASP8Q14790 479 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 TOGARAM2Q6ZUX3 1019 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 TRIM7Q9C029 511 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 KIAA1522Q9P206 1035 aaPredicted RBP8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 SWAP70Q9UH65 585 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 SERPINB13Q9UIV8 391 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 COL2A1P02458 1487 aaPredicted RBP8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 F8VZ95 297 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 MYL1P05976 194 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 SLURP2P0DP57 97 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 GCFC2P16383 781 aaKnown RBP8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 DPEP1P16444 411 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 ELF1P32519 619 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 GNAQP50148 359 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 SESN3P58005 492 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 ZBED6P86452 979 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 ZNF579Q8NAF0 562 aaKnown RBP8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 SUPT20HQ8NEM7 779 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 SLC16A10Q8TF71 515 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 GPKOWQ92917 476 aaPredicted RBP eCLIP8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 SPATA7Q9P0W8 599 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 KIAA1468Q9P260 1216 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 SRPRBQ9Y5M8 271 aaKnown RBP8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 N6AMT1Q9Y5N5 214 aa8.85□□□□□ -0.99
PDLIM5-221ENST00000542407 STXBP3O00186 592 aa8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 TPPPO94811 219 aa8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 TFRCP02786 760 aaKnown RBP8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 GOLGA8HP0CJ92 632 aa8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 ADKP55263 362 aaKnown RBP8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 SOGA3Q5TF21 947 aa8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 TMEM110Q86TL2 294 aa8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 TTLL6Q8N841 843 aa8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 DAGLBQ8NCG7 672 aa8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 FAM71BQ8TC56 605 aa8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 AFAP1L1Q8TED9 768 aa8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 PMM1Q92871 262 aa8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 TRIM11Q96F44 468 aa8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 ANKZF1Q9H8Y5 726 aa8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 ATRNL1Q5VV63 1379 aa8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 GOLGB1Q14789 3259 aaKnown RBP8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 CFAP69A5D8W1 941 aa8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 DDTLA6NHG4 134 aaPredicted RBP8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 USP17L5A8MUK1 530 aa8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 ARHGAP6O43182 974 aa8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 PPIP5K2O43314 1243 aa8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 RNF40O75150 1001 aa8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 CPP00450 1065 aa8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 PDHBP11177 359 aa8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 SMARCA1P28370 1054 aa8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 USP8P40818 1118 aa8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 CACNB3P54284 484 aa8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 PREPLQ4J6C6 727 aaPredicted RBP8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 GBP6Q6ZN66 633 aa8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 METTL16Q86W50 562 aaKnown RBP8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 CLEC10AQ8IUN9 316 aa8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 GDAP1L1Q96MZ0 367 aa8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 BARHL2Q9NY43 387 aa8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 L1RE1Q9UN81 338 aa8.84□□□□□ -0.99
PDLIM5-221ENST00000542407 HMGB1P1B2RPK0 211 aaPredicted RBP8.83□□□□□ -1
PDLIM5-221ENST00000542407 KLRF2D3W0D1 207 aa8.83□□□□□ -1
PDLIM5-221ENST00000542407 CBFA2T2O43439 604 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms