RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 CELF3Q5SZQ8 465 aaKnown RBP23.02■■□□□ 1.28
CACNA2D4-215ENST00000542340 MYSM1Q5VVJ2 828 aa23.02■■□□□ 1.28
CACNA2D4-215ENST00000542340 FAM126BQ8IXS8 530 aa23.02■■□□□ 1.28
CACNA2D4-215ENST00000542340 PPTC7Q8NI37 304 aa23.02■■□□□ 1.28
CACNA2D4-215ENST00000542340 TMEM39AQ9NV64 488 aa23.02■■□□□ 1.28
CACNA2D4-215ENST00000542340 RANBP2P49792 3224 aaKnown RBP23.02■■□□□ 1.28
CACNA2D4-215ENST00000542340 CPLX1O14810 134 aa23.01■■□□□ 1.27
CACNA2D4-215ENST00000542340 GGPS1O95749 300 aa23.01■■□□□ 1.27
CACNA2D4-215ENST00000542340 UBA1P22314 1058 aaKnown RBP23.01■■□□□ 1.27
CACNA2D4-215ENST00000542340 MDM2Q00987 491 aaPredicted RBP23.01■■□□□ 1.27
CACNA2D4-215ENST00000542340 STK3Q13188 491 aa23.01■■□□□ 1.27
CACNA2D4-215ENST00000542340 DGKDQ16760 1214 aa23.01■■□□□ 1.27
CACNA2D4-215ENST00000542340 CPLX2Q6PUV4 134 aaKnown RBP23.01■■□□□ 1.27
CACNA2D4-215ENST00000542340 NLRX1Q86UT6 975 aa23.01■■□□□ 1.27
CACNA2D4-215ENST00000542340 TRIM22Q8IYM9 498 aa23.01■■□□□ 1.27
CACNA2D4-215ENST00000542340 ZMYND12Q9H0C1 365 aa23.01■■□□□ 1.27
CACNA2D4-215ENST00000542340 TPCN1Q9ULQ1 816 aa23.01■■□□□ 1.27
CACNA2D4-215ENST00000542340 CD4P01730 458 aa23■■□□□ 1.27
CACNA2D4-215ENST00000542340 CLK2P49760 499 aaKnown RBP23■■□□□ 1.27
CACNA2D4-215ENST00000542340 AK2P54819 239 aa23■■□□□ 1.27
CACNA2D4-215ENST00000542340 SSRP1Q08945 709 aaKnown RBP23■■□□□ 1.27
CACNA2D4-215ENST00000542340 SEMA3FQ13275 785 aa23■■□□□ 1.27
CACNA2D4-215ENST00000542340 AP3B2Q13367 1082 aa23■■□□□ 1.27
CACNA2D4-215ENST00000542340 NEDD9Q14511 834 aa23■■□□□ 1.27
CACNA2D4-215ENST00000542340 GPRASP2Q96D09 838 aa23■■□□□ 1.27
CACNA2D4-215ENST00000542340 UBE2OQ9C0C9 1292 aaKnown RBP23■■□□□ 1.27
CACNA2D4-215ENST00000542340 MLXIPQ9HAP2 919 aa23■■□□□ 1.27
CACNA2D4-215ENST00000542340 C6orf50Q9HD87 102 aa23■■□□□ 1.27
CACNA2D4-215ENST00000542340 TRIOBPQ9H2D6 2365 aa22.99■■□□□ 1.27
CACNA2D4-215ENST00000542340 PPFIA4O75335 1185 aa22.99■■□□□ 1.27
CACNA2D4-215ENST00000542340 MCTP2Q6DN12 878 aa22.99■■□□□ 1.27
CACNA2D4-215ENST00000542340 CDHR1Q96JP9 859 aa22.99■■□□□ 1.27
CACNA2D4-215ENST00000542340 SPATA33Q96N06 139 aa22.99■■□□□ 1.27
CACNA2D4-215ENST00000542340 SENP7Q9BQF6 1050 aa22.99■■□□□ 1.27
CACNA2D4-215ENST00000542340 SLKQ9H2G2 1235 aaPredicted RBP22.99■■□□□ 1.27
CACNA2D4-215ENST00000542340 PCDH10Q9P2E7 1040 aa22.99■■□□□ 1.27
CACNA2D4-215ENST00000542340 TBX21Q9UL17 535 aa22.99■■□□□ 1.27
CACNA2D4-215ENST00000542340 UBIAD1Q9Y5Z9 338 aa22.99■■□□□ 1.27
CACNA2D4-215ENST00000542340 PFKFB2O60825 505 aa22.98■■□□□ 1.27
CACNA2D4-215ENST00000542340 PPFIA3O75145 1194 aa22.98■■□□□ 1.27
CACNA2D4-215ENST00000542340 HOXD8P13378 290 aaPredicted RBP22.98■■□□□ 1.27
CACNA2D4-215ENST00000542340 RAG1P15918 1043 aa22.98■■□□□ 1.27
CACNA2D4-215ENST00000542340 ITGB5P18084 799 aa22.98■■□□□ 1.27
CACNA2D4-215ENST00000542340 GNA11P29992 359 aa22.98■■□□□ 1.27
CACNA2D4-215ENST00000542340 NEK4P51957 841 aa22.98■■□□□ 1.27
CACNA2D4-215ENST00000542340 NBPF20Q3BBV1 942 aa22.98■■□□□ 1.27
CACNA2D4-215ENST00000542340 HSDL1Q3SXM5 330 aa22.98■■□□□ 1.27
CACNA2D4-215ENST00000542340 NFRKBQ6P4R8 1299 aa22.98■■□□□ 1.27
CACNA2D4-215ENST00000542340 CCDC148Q8NFR7 591 aa22.98■■□□□ 1.27
CACNA2D4-215ENST00000542340 BADQ92934 168 aa22.98■■□□□ 1.27
CACNA2D4-215ENST00000542340 ANO3Q9BYT9 981 aa22.98■■□□□ 1.27
CACNA2D4-215ENST00000542340 SH3GLB2Q9NR46 395 aa22.98■■□□□ 1.27
CACNA2D4-215ENST00000542340 MAFGO15525 162 aa22.97■■□□□ 1.27
CACNA2D4-215ENST00000542340 CDKL5O76039 1030 aa22.97■■□□□ 1.27
CACNA2D4-215ENST00000542340 DEXIO95424 95 aa22.97■■□□□ 1.27
CACNA2D4-215ENST00000542340 ITGB8P26012 769 aa22.97■■□□□ 1.27
CACNA2D4-215ENST00000542340 PTPN11Q06124 597 aaPredicted RBP22.97■■□□□ 1.27
CACNA2D4-215ENST00000542340 SCRN1Q12765 414 aa22.97■■□□□ 1.27
CACNA2D4-215ENST00000542340 METTL7BQ6UX53 244 aa22.97■■□□□ 1.27
CACNA2D4-215ENST00000542340 GIMAP8Q8ND71 665 aaPredicted RBP22.97■■□□□ 1.27
CACNA2D4-215ENST00000542340 KAT2BQ92831 832 aa22.97■■□□□ 1.27
CACNA2D4-215ENST00000542340 JADE2Q9NQC1 790 aa22.97■■□□□ 1.27
CACNA2D4-215ENST00000542340 TMEM260Q9NX78 707 aa22.97■■□□□ 1.27
CACNA2D4-215ENST00000542340 SCN10AQ9Y5Y9 1956 aa22.96■■□□□ 1.27
CACNA2D4-215ENST00000542340 TIMP1P01033 207 aa22.96■■□□□ 1.27
CACNA2D4-215ENST00000542340 SREBF1P36956 1147 aa22.96■■□□□ 1.27
CACNA2D4-215ENST00000542340 BICD2Q8TD16 824 aa22.96■■□□□ 1.27
CACNA2D4-215ENST00000542340 PGBD1Q96JS3 809 aa22.96■■□□□ 1.27
CACNA2D4-215ENST00000542340 TRPV6Q9H1D0 765 aa22.96■■□□□ 1.27
CACNA2D4-215ENST00000542340 SORBS3O60504 671 aa22.95■■□□□ 1.26
CACNA2D4-215ENST00000542340 B4GALT4O60513 344 aa22.95■■□□□ 1.26
CACNA2D4-215ENST00000542340 SUPT20HL2P0C7V6 817 aa22.95■■□□□ 1.26
CACNA2D4-215ENST00000542340 MTMR1Q13613 665 aa22.95■■□□□ 1.26
CACNA2D4-215ENST00000542340 LTBP2Q14767 1821 aa22.95■■□□□ 1.26
CACNA2D4-215ENST00000542340 JAKMIP3Q5VZ66 844 aa22.95■■□□□ 1.26
CACNA2D4-215ENST00000542340 CYFIP1Q7L576 1253 aa22.95■■□□□ 1.26
CACNA2D4-215ENST00000542340 TDHQ8IZJ6 230 aa22.95■■□□□ 1.26
CACNA2D4-215ENST00000542340 FAM177A1Q8N128 213 aaPredicted RBP22.95■■□□□ 1.26
CACNA2D4-215ENST00000542340 REXO1Q8N1G1 1221 aaKnown RBP22.95■■□□□ 1.26
CACNA2D4-215ENST00000542340 MXRA8Q9BRK3 442 aa22.95■■□□□ 1.26
CACNA2D4-215ENST00000542340 KATNAL1Q9BW62 490 aa22.95■■□□□ 1.26
CACNA2D4-215ENST00000542340 BCAS3Q9H6U6 928 aa22.95■■□□□ 1.26
CACNA2D4-215ENST00000542340 VPS54Q9P1Q0 977 aa22.95■■□□□ 1.26
CACNA2D4-215ENST00000542340 MYH7BA7E2Y1 1941 aa22.94■■□□□ 1.26
CACNA2D4-215ENST00000542340 F2P00734 622 aa22.94■■□□□ 1.26
CACNA2D4-215ENST00000542340 SESTD1Q86VW0 696 aa22.94■■□□□ 1.26
CACNA2D4-215ENST00000542340 NOP56O00567 594 aaKnown RBP22.93■■□□□ 1.26
CACNA2D4-215ENST00000542340 ADAMTS3O15072 1205 aa22.93■■□□□ 1.26
CACNA2D4-215ENST00000542340 ATP9AO75110 1047 aa22.93■■□□□ 1.26
CACNA2D4-215ENST00000542340 KCNA2P16389 499 aa22.93■■□□□ 1.26
CACNA2D4-215ENST00000542340 ARHGAP4P98171 946 aa22.93■■□□□ 1.26
CACNA2D4-215ENST00000542340 CEP55Q53EZ4 464 aa22.93■■□□□ 1.26
CACNA2D4-215ENST00000542340 FAM47CQ5HY64 1035 aa22.93■■□□□ 1.26
CACNA2D4-215ENST00000542340 MFSD5Q6N075 450 aa22.93■■□□□ 1.26
CACNA2D4-215ENST00000542340 TRMT13Q9NUP7 481 aaKnown RBP22.93■■□□□ 1.26
CACNA2D4-215ENST00000542340 HAS3O00219 553 aa22.92■■□□□ 1.26
CACNA2D4-215ENST00000542340 ZNF286BP0CG31 522 aa22.92■■□□□ 1.26
CACNA2D4-215ENST00000542340 PSEN2P49810 448 aa22.92■■□□□ 1.26
CACNA2D4-215ENST00000542340 NLRP5P59047 1200 aa22.92■■□□□ 1.26
CACNA2D4-215ENST00000542340 CRYGNQ8WXF5 182 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms