RNA–Protein interactions for RNA: ENST00000542128.5

KDM3A-216, Transcript of lysine demethylase 3A, humanhuman

TSL 5 BASIC

Gene KDM3A, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-216ENST00000542128 CHRNA5P30532 468 aa13.57□□□□□ -0.24
KDM3A-216ENST00000542128 MSH2P43246 934 aa13.57□□□□□ -0.24
KDM3A-216ENST00000542128 PPP2R2AP63151 447 aa13.57□□□□□ -0.24
KDM3A-216ENST00000542128 BIRC3Q13489 604 aa13.57□□□□□ -0.24
KDM3A-216ENST00000542128 SNX1Q13596 522 aa13.57□□□□□ -0.24
KDM3A-216ENST00000542128 NFIXQ14938 502 aa13.57□□□□□ -0.24
KDM3A-216ENST00000542128 CERKLQ49MI3 558 aaPredicted RBP13.57□□□□□ -0.24
KDM3A-216ENST00000542128 ANKRD20A3Q5VUR7 823 aa13.57□□□□□ -0.24
KDM3A-216ENST00000542128 TRIM65Q6PJ69 517 aa13.57□□□□□ -0.24
KDM3A-216ENST00000542128 NELFBQ8WX92 580 aa13.57□□□□□ -0.24
KDM3A-216ENST00000542128 HIC2Q96JB3 615 aa13.57□□□□□ -0.24
KDM3A-216ENST00000542128 RNPC3Q96LT9 517 aaKnown RBP13.57□□□□□ -0.24
KDM3A-216ENST00000542128 A1CFQ9NQ94 594 aaKnown RBP13.57□□□□□ -0.24
KDM3A-216ENST00000542128 SH3BP1Q9Y3L3 701 aa13.57□□□□□ -0.24
KDM3A-216ENST00000542128 CASQ2O14958 399 aaPredicted RBP13.56□□□□□ -0.24
KDM3A-216ENST00000542128 GRIN3BO60391 1043 aa13.56□□□□□ -0.24
KDM3A-216ENST00000542128 POTEJP0CG39 1038 aa13.56□□□□□ -0.24
KDM3A-216ENST00000542128 USH1GQ495M9 461 aa13.56□□□□□ -0.24
KDM3A-216ENST00000542128 TBC1D9BQ66K14 1250 aa13.56□□□□□ -0.24
KDM3A-216ENST00000542128 HS2ST1Q7LGA3 356 aa13.56□□□□□ -0.24
KDM3A-216ENST00000542128 CFAP61Q8NHU2 1237 aa13.56□□□□□ -0.24
KDM3A-216ENST00000542128 ZNF277Q9NRM2 450 aaPredicted RBP13.56□□□□□ -0.24
KDM3A-216ENST00000542128 POLR3EQ9NVU0 708 aa13.56□□□□□ -0.24
KDM3A-216ENST00000542128 USP17L3A6NCW0 530 aa13.56□□□□□ -0.24
KDM3A-216ENST00000542128 USP17L4A6NCW7 530 aa13.56□□□□□ -0.24
KDM3A-216ENST00000542128 CFBP00751 764 aa13.56□□□□□ -0.24
KDM3A-216ENST00000542128 COPB1P53618 953 aaKnown RBP13.56□□□□□ -0.24
KDM3A-216ENST00000542128 TBC1D10BQ4KMP7 808 aaPredicted RBP13.56□□□□□ -0.24
KDM3A-216ENST00000542128 SLC44A4Q53GD3 710 aa13.56□□□□□ -0.24
KDM3A-216ENST00000542128 WDR93Q6P2C0 686 aa13.56□□□□□ -0.24
KDM3A-216ENST00000542128 USP17L1Q7RTZ2 530 aa13.56□□□□□ -0.24
KDM3A-216ENST00000542128 TRIM42Q8IWZ5 723 aa13.56□□□□□ -0.24
KDM3A-216ENST00000542128 MAP4K1Q92918 833 aa13.56□□□□□ -0.24
KDM3A-216ENST00000542128 ECT2Q9H8V3 914 aa13.56□□□□□ -0.24
KDM3A-216ENST00000542128 RAB21Q9UL25 225 aa13.56□□□□□ -0.24
KDM3A-216ENST00000542128 SOS2Q07890 1332 aaPredicted RBP13.56□□□□□ -0.24
KDM3A-216ENST00000542128 USP17L8P0C7I0 530 aa13.56□□□□□ -0.24
KDM3A-216ENST00000542128 MAGOHP61326 146 aaKnown RBP13.56□□□□□ -0.24
KDM3A-216ENST00000542128 SCYL3Q8IZE3 742 aa13.56□□□□□ -0.24
KDM3A-216ENST00000542128 LRRC8CQ8TDW0 803 aa13.56□□□□□ -0.24
KDM3A-216ENST00000542128 SNRNP27Q8WVK2 155 aaKnown RBP13.56□□□□□ -0.24
KDM3A-216ENST00000542128 KAT2BQ92831 832 aa13.56□□□□□ -0.24
KDM3A-216ENST00000542128 MAGOHBQ96A72 148 aaKnown RBP13.56□□□□□ -0.24
KDM3A-216ENST00000542128 EAF2Q96CJ1 260 aaPredicted RBP13.56□□□□□ -0.24
KDM3A-216ENST00000542128 SLC10A4Q96EP9 437 aa13.56□□□□□ -0.24
KDM3A-216ENST00000542128 CYP19A1P11511 503 aaPredicted RBP13.55□□□□□ -0.24
KDM3A-216ENST00000542128 CDC25CP30307 473 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 ASIC1P78348 528 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 SLC39A14Q15043 492 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 FAM47AQ5JRC9 791 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 FUKQ8N0W3 1084 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 CHURC1Q8WUH1 139 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 SPATA31A5Q5VU36 1347 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 SPATA31A7Q8IWB4 1347 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 ESYT3A0FGR9 886 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 CETN2P41208 172 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 SCTRP47872 440 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 SERPINB4P48594 390 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 RPS6KA3P51812 740 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 CTDSPL2Q05D32 466 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 DHX9Q08211 1270 aaKnown RBP13.55□□□□□ -0.24
KDM3A-216ENST00000542128 CETN1Q12798 172 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 C3orf20Q8ND61 904 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 NSUN7Q8NE18 718 aaKnown RBP13.55□□□□□ -0.24
KDM3A-216ENST00000542128 SDR42E1Q8WUS8 393 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 IQCDQ96DY2 449 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 RAB17Q9H0T7 212 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 COL15A1P39059 1388 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 KRIT1O00522 736 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 PDE6CP51160 858 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 CYP27A1Q02318 531 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 ARL10Q8N8L6 244 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 SMC1BQ8NDV3 1235 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 NUDCD1Q96RS6 583 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 PLEKHF1Q96S99 279 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 MIS12Q9H081 205 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 ATP8A1Q9Y2Q0 1164 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 C15orf41Q9Y2V0 281 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.55□□□□□ -0.24
KDM3A-216ENST00000542128 AHCYL1O43865 530 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 MORC3Q14149 939 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 NUGGCQ68CJ6 796 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 NME8Q8N427 588 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 DDX12PQ92771 950 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 ETNK1Q9HBU6 452 aa13.55□□□□□ -0.24
KDM3A-216ENST00000542128 PHF20L1A8MW92 1017 aa13.54□□□□□ -0.24
KDM3A-216ENST00000542128 PDE6AP16499 860 aa13.54□□□□□ -0.24
KDM3A-216ENST00000542128 PSMD7P51665 324 aa13.54□□□□□ -0.24
KDM3A-216ENST00000542128 RAPGEF1Q13905 1077 aa13.54□□□□□ -0.24
KDM3A-216ENST00000542128 GLE1Q53GS7 698 aaKnown RBP13.54□□□□□ -0.24
KDM3A-216ENST00000542128 FAM47CQ5HY64 1035 aa13.54□□□□□ -0.24
KDM3A-216ENST00000542128 FAM81AQ8TBF8 368 aa13.54□□□□□ -0.24
KDM3A-216ENST00000542128 FAM207AQ9NSI2 230 aaPredicted RBP13.54□□□□□ -0.24
KDM3A-216ENST00000542128 A0A0D9SFI3 127 aa13.54□□□□□ -0.24
KDM3A-216ENST00000542128 KLHL33A6NCF5 533 aa13.54□□□□□ -0.24
KDM3A-216ENST00000542128 ATP1A1P05023 1023 aaKnown RBP13.54□□□□□ -0.24
KDM3A-216ENST00000542128 RCN2Q14257 317 aa13.54□□□□□ -0.24
KDM3A-216ENST00000542128 C2orf69Q8N8R5 385 aa13.54□□□□□ -0.24
KDM3A-216ENST00000542128 MAIP1Q8WWC4 291 aa13.54□□□□□ -0.24
KDM3A-216ENST00000542128 ROR2Q01974 943 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms