RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 PCDHA2Q9Y5H9 948 aa5.68□□□□□ -1.5
LEMD3-204ENST00000542032 OTOL1A6NHN0 477 aaPredicted RBP5.67□□□□□ -1.5
LEMD3-204ENST00000542032 SLURP1P55000 103 aa5.67□□□□□ -1.5
LEMD3-204ENST00000542032 RBL2Q08999 1139 aa5.67□□□□□ -1.5
LEMD3-204ENST00000542032 SERINC3Q13530 473 aa5.67□□□□□ -1.5
LEMD3-204ENST00000542032 ETV3LQ6ZN32 361 aa5.67□□□□□ -1.5
LEMD3-204ENST00000542032 LRRC47Q8N1G4 583 aaKnown RBP5.67□□□□□ -1.5
LEMD3-204ENST00000542032 TRIM55Q9BYV6 548 aa5.67□□□□□ -1.5
LEMD3-204ENST00000542032 TANGO6Q9C0B7 1094 aa5.67□□□□□ -1.5
LEMD3-204ENST00000542032 PDPK1O15530 556 aa5.66□□□□□ -1.5
LEMD3-204ENST00000542032 ADCY3O60266 1144 aa5.66□□□□□ -1.5
LEMD3-204ENST00000542032 SASH1O94885 1247 aa5.66□□□□□ -1.5
LEMD3-204ENST00000542032 PABPC1P11940 636 aaKnown RBP5.66□□□□□ -1.5
LEMD3-204ENST00000542032 ATP2B1P20020 1258 aa5.66□□□□□ -1.5
LEMD3-204ENST00000542032 ERICH6BQ5W0A0 696 aa5.66□□□□□ -1.5
LEMD3-204ENST00000542032 STYK1Q6J9G0 422 aa5.66□□□□□ -1.5
LEMD3-204ENST00000542032 SPATC1Q76KD6 591 aa5.66□□□□□ -1.5
LEMD3-204ENST00000542032 MILR1Q7Z6M3 343 aa5.66□□□□□ -1.5
LEMD3-204ENST00000542032 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.66□□□□□ -1.5
LEMD3-204ENST00000542032 DCAF4Q8WV16 495 aa5.66□□□□□ -1.5
LEMD3-204ENST00000542032 ZFYVE21Q9BQ24 234 aa5.66□□□□□ -1.5
LEMD3-204ENST00000542032 SYT3Q9BQG1 590 aa5.66□□□□□ -1.5
LEMD3-204ENST00000542032 GORASP1Q9BQQ3 440 aa5.66□□□□□ -1.5
LEMD3-204ENST00000542032 SPATA9Q9BWV2 254 aa5.66□□□□□ -1.5
LEMD3-204ENST00000542032 PCDH18Q9HCL0 1135 aa5.66□□□□□ -1.5
LEMD3-204ENST00000542032 COA3Q9Y2R0 106 aaPredicted RBP5.66□□□□□ -1.5
LEMD3-204ENST00000542032 TRAV20A0A0B4J274 112 aa5.65□□□□□ -1.5
LEMD3-204ENST00000542032 A0A1B0GTL3 188 aa5.65□□□□□ -1.5
LEMD3-204ENST00000542032 TCRBV5S2A0A599 114 aa5.65□□□□□ -1.5
LEMD3-204ENST00000542032 HGSO14964 777 aaPredicted RBP5.65□□□□□ -1.5
LEMD3-204ENST00000542032 PRODHO43272 600 aa5.65□□□□□ -1.5
LEMD3-204ENST00000542032 CYP2C8P10632 490 aa5.65□□□□□ -1.5
LEMD3-204ENST00000542032 CHRNA2Q15822 529 aa5.65□□□□□ -1.5
LEMD3-204ENST00000542032 CR1LQ2VPA4 569 aa5.65□□□□□ -1.5
LEMD3-204ENST00000542032 PRR31Q5SQ13 230 aa5.65□□□□□ -1.5
LEMD3-204ENST00000542032 YOD1Q5VVQ6 348 aaPredicted RBP5.65□□□□□ -1.5
LEMD3-204ENST00000542032 STEAP3Q658P3 488 aa5.65□□□□□ -1.5
LEMD3-204ENST00000542032 NSMFQ6X4W1 530 aa5.65□□□□□ -1.5
LEMD3-204ENST00000542032 ADGRG2Q8IZP9 1017 aa5.65□□□□□ -1.5
LEMD3-204ENST00000542032 FAM26EQ8N5C1 309 aa5.65□□□□□ -1.5
LEMD3-204ENST00000542032 SYT8Q8NBV8 401 aa5.65□□□□□ -1.5
LEMD3-204ENST00000542032 FEZF2Q8TBJ5 459 aa5.65□□□□□ -1.5
LEMD3-204ENST00000542032 DDX11Q96FC9 970 aa5.65□□□□□ -1.5
LEMD3-204ENST00000542032 C11orf84Q9BUA3 381 aaPredicted RBP5.65□□□□□ -1.5
LEMD3-204ENST00000542032 PHF20Q9BVI0 1012 aa5.65□□□□□ -1.5
LEMD3-204ENST00000542032 PDGFDQ9GZP0 370 aaPredicted RBP5.65□□□□□ -1.5
LEMD3-204ENST00000542032 EPB41L1Q9H4G0 881 aa5.65□□□□□ -1.5
LEMD3-204ENST00000542032 CLDND1Q9NY35 253 aa5.65□□□□□ -1.5
LEMD3-204ENST00000542032 HSPBP1Q9NZL4 362 aa5.65□□□□□ -1.5
LEMD3-204ENST00000542032 SIRPGQ9P1W8 387 aa5.65□□□□□ -1.5
LEMD3-204ENST00000542032 KCNC1P48547 511 aa5.64□□□□□ -1.51
LEMD3-204ENST00000542032 RASA3Q14644 834 aa5.64□□□□□ -1.51
LEMD3-204ENST00000542032 SPATS1Q496A3 300 aa5.64□□□□□ -1.51
LEMD3-204ENST00000542032 HABP4Q5JVS0 413 aaKnown RBP5.64□□□□□ -1.51
LEMD3-204ENST00000542032 CYP4F22Q6NT55 531 aa5.64□□□□□ -1.51
LEMD3-204ENST00000542032 LBX2Q6XYB7 198 aa5.64□□□□□ -1.51
LEMD3-204ENST00000542032 USP53Q70EK8 1073 aa5.64□□□□□ -1.51
LEMD3-204ENST00000542032 LRP10Q7Z4F1 713 aa5.64□□□□□ -1.51
LEMD3-204ENST00000542032 FRMD5Q7Z6J6 570 aa5.64□□□□□ -1.51
LEMD3-204ENST00000542032 CARFQ8N187 725 aa5.64□□□□□ -1.51
LEMD3-204ENST00000542032 KYQ8NBH2 561 aa5.64□□□□□ -1.51
LEMD3-204ENST00000542032 HIRIP3Q9BW71 556 aaPredicted RBP5.64□□□□□ -1.51
LEMD3-204ENST00000542032 SLC6A20Q9NP91 592 aa5.64□□□□□ -1.51
LEMD3-204ENST00000542032 NGRNQ9NPE2 291 aaKnown RBP5.64□□□□□ -1.51
LEMD3-204ENST00000542032 PPARGC1AQ9UBK2 798 aaKnown RBP5.64□□□□□ -1.51
LEMD3-204ENST00000542032 DGKIO75912 1065 aa5.63□□□□□ -1.51
LEMD3-204ENST00000542032 THBS2P35442 1172 aa5.63□□□□□ -1.51
LEMD3-204ENST00000542032 ITGA1P56199 1179 aa5.63□□□□□ -1.51
LEMD3-204ENST00000542032 GPR85P60893 370 aa5.63□□□□□ -1.51
LEMD3-204ENST00000542032 KCNT2Q6UVM3 1135 aa5.63□□□□□ -1.51
LEMD3-204ENST00000542032 ARRDC4Q8NCT1 418 aa5.63□□□□□ -1.51
LEMD3-204ENST00000542032 PHOSPHO1Q8TCT1 267 aa5.63□□□□□ -1.51
LEMD3-204ENST00000542032 ZBTB8AQ96BR9 441 aa5.63□□□□□ -1.51
LEMD3-204ENST00000542032 CHAMP1Q96JM3 812 aa5.63□□□□□ -1.51
LEMD3-204ENST00000542032 TEPSINQ96N21 525 aa5.63□□□□□ -1.51
LEMD3-204ENST00000542032 SPATA25Q9BR10 227 aa5.63□□□□□ -1.51
LEMD3-204ENST00000542032 SMOC1Q9H4F8 434 aa5.63□□□□□ -1.51
LEMD3-204ENST00000542032 DTLQ9NZJ0 730 aa5.63□□□□□ -1.51
LEMD3-204ENST00000542032 PCDHB4Q9Y5E5 795 aa5.63□□□□□ -1.51
LEMD3-204ENST00000542032 ASXL2Q76L83 1435 aa5.63□□□□□ -1.51
LEMD3-204ENST00000542032 U2SURPO15042 1029 aaKnown RBP5.62□□□□□ -1.51
LEMD3-204ENST00000542032 LRG1P02750 347 aa5.62□□□□□ -1.51
LEMD3-204ENST00000542032 ADAM9Q13443 819 aa5.62□□□□□ -1.51
LEMD3-204ENST00000542032 KIZQ2M2Z5 673 aa5.62□□□□□ -1.51
LEMD3-204ENST00000542032 ZFYVE27Q5T4F4 411 aa5.62□□□□□ -1.51
LEMD3-204ENST00000542032 CD300LDQ6UXZ3 194 aa5.62□□□□□ -1.51
LEMD3-204ENST00000542032 OTOP3Q7RTS5 596 aa5.62□□□□□ -1.51
LEMD3-204ENST00000542032 ZC3H18Q86VM9 953 aaKnown RBP5.62□□□□□ -1.51
LEMD3-204ENST00000542032 ZBTB38Q8NAP3 1195 aaPredicted RBP5.62□□□□□ -1.51
LEMD3-204ENST00000542032 TTLL11Q8NHH1 800 aa5.62□□□□□ -1.51
LEMD3-204ENST00000542032 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.62□□□□□ -1.51
LEMD3-204ENST00000542032 JAM3Q9BX67 310 aa5.62□□□□□ -1.51
LEMD3-204ENST00000542032 NTMQ9P121 344 aa5.62□□□□□ -1.51
LEMD3-204ENST00000542032 MYOTQ9UBF9 498 aa5.62□□□□□ -1.51
LEMD3-204ENST00000542032 ASH2LQ9UBL3 628 aa5.62□□□□□ -1.51
LEMD3-204ENST00000542032 MYRFQ9Y2G1 1151 aa5.62□□□□□ -1.51
LEMD3-204ENST00000542032 NOBOXO60393 691 aa5.61□□□□□ -1.51
LEMD3-204ENST00000542032 C6orf222P0C671 652 aaPredicted RBP5.61□□□□□ -1.51
LEMD3-204ENST00000542032 GRK2P25098 689 aa5.61□□□□□ -1.51
LEMD3-204ENST00000542032 RPL13P26373 211 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms