RNA–Protein interactions for RNA: ENST00000541922.1

C2CD3-216, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 5

Gene C2CD3, Length 767 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-216ENST00000541922 XRRA1Q6P2D8 792 aa25.38■■□□□ 1.65
C2CD3-216ENST00000541922 PSRC1Q6PGN9 363 aaPredicted RBP25.38■■□□□ 1.65
C2CD3-216ENST00000541922 C16orf59Q7L2K0 433 aa25.38■■□□□ 1.65
C2CD3-216ENST00000541922 KAT2BQ92831 832 aa25.38■■□□□ 1.65
C2CD3-216ENST00000541922 KATNAL1Q9BW62 490 aa25.38■■□□□ 1.65
C2CD3-216ENST00000541922 NOD1Q9Y239 953 aa25.38■■□□□ 1.65
C2CD3-216ENST00000541922 V9GY48 417 aaPredicted RBP25.38■■□□□ 1.65
C2CD3-216ENST00000541922 RPS6KB1P23443 525 aa25.37■■□□□ 1.65
C2CD3-216ENST00000541922 ICAM3P32942 547 aa25.37■■□□□ 1.65
C2CD3-216ENST00000541922 METAP2P50579 478 aaKnown RBP eCLIP25.37■■□□□ 1.65
C2CD3-216ENST00000541922 FUT2Q10981 343 aa25.37■■□□□ 1.65
C2CD3-216ENST00000541922 HSDL1Q3SXM5 330 aa25.37■■□□□ 1.65
C2CD3-216ENST00000541922 FAM109BQ6ICB4 259 aaPredicted RBP25.37■■□□□ 1.65
C2CD3-216ENST00000541922 ZNF365Q70YC5 407 aa25.37■■□□□ 1.65
C2CD3-216ENST00000541922 BRF1Q92994 677 aa25.37■■□□□ 1.65
C2CD3-216ENST00000541922 WNT8AQ9H1J5 351 aa25.37■■□□□ 1.65
C2CD3-216ENST00000541922 FAM217BQ9NTX9 383 aaPredicted RBP25.37■■□□□ 1.65
C2CD3-216ENST00000541922 CCDC196A0A1B0GTZ2 297 aa25.36■■□□□ 1.65
C2CD3-216ENST00000541922 SPDYE3A6NKU9 549 aa25.36■■□□□ 1.65
C2CD3-216ENST00000541922 SPATA31C2B4DYI2 1134 aa25.36■■□□□ 1.65
C2CD3-216ENST00000541922 FIBPO43427 364 aa25.36■■□□□ 1.65
C2CD3-216ENST00000541922 PPFIA4O75335 1185 aa25.36■■□□□ 1.65
C2CD3-216ENST00000541922 ZNF286BP0CG31 522 aa25.36■■□□□ 1.65
C2CD3-216ENST00000541922 CDC27P30260 824 aa25.36■■□□□ 1.65
C2CD3-216ENST00000541922 PSEN2P49810 448 aa25.36■■□□□ 1.65
C2CD3-216ENST00000541922 NAPAP54920 295 aa25.36■■□□□ 1.65
C2CD3-216ENST00000541922 UBE2SQ16763 222 aa25.36■■□□□ 1.65
C2CD3-216ENST00000541922 WWC2Q6AWC2 1192 aa25.36■■□□□ 1.65
C2CD3-216ENST00000541922 SESTD1Q86VW0 696 aa25.36■■□□□ 1.65
C2CD3-216ENST00000541922 MTMR10Q9NXD2 777 aa25.36■■□□□ 1.65
C2CD3-216ENST00000541922 F2P00734 622 aa25.35■■□□□ 1.65
C2CD3-216ENST00000541922 HOXD8P13378 290 aaPredicted RBP25.35■■□□□ 1.65
C2CD3-216ENST00000541922 NEDD9Q14511 834 aa25.35■■□□□ 1.65
C2CD3-216ENST00000541922 PTGISQ16647 500 aa25.35■■□□□ 1.65
C2CD3-216ENST00000541922 NLRX1Q86UT6 975 aa25.35■■□□□ 1.65
C2CD3-216ENST00000541922 ALG1Q9BT22 464 aa25.35■■□□□ 1.65
C2CD3-216ENST00000541922 DOCK5Q9H7D0 1870 aa25.34■■□□□ 1.65
C2CD3-216ENST00000541922 hCG_1984214I3L0E3 225 aa25.34■■□□□ 1.65
C2CD3-216ENST00000541922 ADD1P35611 737 aaKnown RBP25.34■■□□□ 1.65
C2CD3-216ENST00000541922 SEMA3FQ13275 785 aa25.34■■□□□ 1.65
C2CD3-216ENST00000541922 MFSD10Q14728 455 aa25.34■■□□□ 1.65
C2CD3-216ENST00000541922 ZNF697Q5TEC3 545 aa25.34■■□□□ 1.65
C2CD3-216ENST00000541922 PPP1R18Q6NYC8 613 aa25.34■■□□□ 1.65
C2CD3-216ENST00000541922 RPUSD2Q8IZ73 545 aaKnown RBP25.34■■□□□ 1.65
C2CD3-216ENST00000541922 FBXL16Q8N461 479 aa25.34■■□□□ 1.65
C2CD3-216ENST00000541922 ZNF713Q8N859 430 aaPredicted RBP25.34■■□□□ 1.65
C2CD3-216ENST00000541922 C7orf31Q8N865 590 aa25.34■■□□□ 1.65
C2CD3-216ENST00000541922 SCLYQ96I15 445 aa25.34■■□□□ 1.65
C2CD3-216ENST00000541922 PCDHA6Q9UN73 950 aa25.34■■□□□ 1.65
C2CD3-216ENST00000541922 PCDHA8Q9Y5H6 950 aa25.34■■□□□ 1.65
C2CD3-216ENST00000541922 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.33■■□□□ 1.65
C2CD3-216ENST00000541922 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.33■■□□□ 1.65
C2CD3-216ENST00000541922 NOP56O00567 594 aaKnown RBP25.33■■□□□ 1.65
C2CD3-216ENST00000541922 FGBP02675 491 aa25.33■■□□□ 1.65
C2CD3-216ENST00000541922 BFSP2Q13515 415 aa25.33■■□□□ 1.65
C2CD3-216ENST00000541922 KIAA0753Q2KHM9 967 aa25.33■■□□□ 1.65
C2CD3-216ENST00000541922 GDF6Q6KF10 455 aaPredicted RBP25.33■■□□□ 1.65
C2CD3-216ENST00000541922 RETREG2Q8NC44 543 aa25.33■■□□□ 1.65
C2CD3-216ENST00000541922 USP26Q9BXU7 913 aa25.33■■□□□ 1.65
C2CD3-216ENST00000541922 AGXT2Q9BYV1 514 aa25.33■■□□□ 1.65
C2CD3-216ENST00000541922 MTIF3Q9H2K0 278 aaKnown RBP25.33■■□□□ 1.65
C2CD3-216ENST00000541922 EHMT1Q9H9B1 1298 aa25.33■■□□□ 1.65
C2CD3-216ENST00000541922 HAS3O00219 553 aa25.32■■□□□ 1.64
C2CD3-216ENST00000541922 PITPNM1O00562 1244 aa25.32■■□□□ 1.64
C2CD3-216ENST00000541922 TYW1BQ6NUM6 668 aa25.32■■□□□ 1.64
C2CD3-216ENST00000541922 METTL7BQ6UX53 244 aa25.32■■□□□ 1.64
C2CD3-216ENST00000541922 CYFIP1Q7L576 1253 aa25.32■■□□□ 1.64
C2CD3-216ENST00000541922 TEX2Q8IWB9 1127 aa25.32■■□□□ 1.64
C2CD3-216ENST00000541922 BCAS3Q9H6U6 928 aa25.32■■□□□ 1.64
C2CD3-216ENST00000541922 RIC8AQ9NPQ8 531 aa25.32■■□□□ 1.64
C2CD3-216ENST00000541922 HDAC6Q9UBN7 1215 aa25.32■■□□□ 1.64
C2CD3-216ENST00000541922 GTF2IRD1Q9UHL9 959 aa25.32■■□□□ 1.64
C2CD3-216ENST00000541922 TRIP12Q14669 1992 aaPredicted RBP25.32■■□□□ 1.64
C2CD3-216ENST00000541922 STXBP3O00186 592 aa25.31■■□□□ 1.64
C2CD3-216ENST00000541922 ADCY7P51828 1080 aa25.31■■□□□ 1.64
C2CD3-216ENST00000541922 RASIP1Q5U651 963 aa25.31■■□□□ 1.64
C2CD3-216ENST00000541922 RUFY3Q7L099 469 aa25.31■■□□□ 1.64
C2CD3-216ENST00000541922 CCDC155Q8N6L0 562 aa25.31■■□□□ 1.64
C2CD3-216ENST00000541922 HERVK_113Q902F9 699 aa25.31■■□□□ 1.64
C2CD3-216ENST00000541922 GPRASP2Q96D09 838 aa25.31■■□□□ 1.64
C2CD3-216ENST00000541922 CDHR1Q96JP9 859 aa25.31■■□□□ 1.64
C2CD3-216ENST00000541922 FAM161BQ96MY7 647 aa25.31■■□□□ 1.64
C2CD3-216ENST00000541922 SENP7Q9BQF6 1050 aa25.31■■□□□ 1.64
C2CD3-216ENST00000541922 BARHL2Q9NY43 387 aa25.31■■□□□ 1.64
C2CD3-216ENST00000541922 SCN5AQ14524 2016 aa25.3■■□□□ 1.64
C2CD3-216ENST00000541922 GIMAP8Q8ND71 665 aaPredicted RBP25.3■■□□□ 1.64
C2CD3-216ENST00000541922 C16orf70Q9BSU1 422 aa25.3■■□□□ 1.64
C2CD3-216ENST00000541922 GLT8D2Q9H1C3 349 aa25.3■■□□□ 1.64
C2CD3-216ENST00000541922 ZSWIM6Q9HCJ5 1215 aa25.3■■□□□ 1.64
C2CD3-216ENST00000541922 NID2Q14112 1375 aa25.3■■□□□ 1.64
C2CD3-216ENST00000541922 SMCO2A6NFE2 343 aa25.29■■□□□ 1.64
C2CD3-216ENST00000541922 FOSP01100 380 aaPredicted RBP25.29■■□□□ 1.64
C2CD3-216ENST00000541922 LGALS2P05162 132 aa25.29■■□□□ 1.64
C2CD3-216ENST00000541922 PFKMP08237 780 aa25.29■■□□□ 1.64
C2CD3-216ENST00000541922 PFKFB3Q16875 520 aaPredicted RBP25.29■■□□□ 1.64
C2CD3-216ENST00000541922 OTOP2Q7RTS6 562 aa25.29■■□□□ 1.64
C2CD3-216ENST00000541922 DEFB128Q7Z7B8 93 aa25.29■■□□□ 1.64
C2CD3-216ENST00000541922 CAGE1Q8TC20 777 aa25.29■■□□□ 1.64
C2CD3-216ENST00000541922 CTAGE1Q96RT6 745 aa25.29■■□□□ 1.64
C2CD3-216ENST00000541922 UBIAD1Q9Y5Z9 338 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms