RNA–Protein interactions for RNA: ENST00000541916.5

FNDC3A-206, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-206ENST00000541916 CSF1RP07333 972 aa9.51□□□□□ -0.89
FNDC3A-206ENST00000541916 SFNP31947 248 aa9.51□□□□□ -0.89
FNDC3A-206ENST00000541916 ITKQ08881 620 aa9.51□□□□□ -0.89
FNDC3A-206ENST00000541916 PPIL2Q13356 520 aa9.51□□□□□ -0.89
FNDC3A-206ENST00000541916 CTTNQ14247 550 aaKnown RBP9.51□□□□□ -0.89
FNDC3A-206ENST00000541916 QRICH1Q2TAL8 776 aa9.51□□□□□ -0.89
FNDC3A-206ENST00000541916 ZNF569Q5MCW4 686 aa9.51□□□□□ -0.89
FNDC3A-206ENST00000541916 CYFIP1Q7L576 1253 aa9.51□□□□□ -0.89
FNDC3A-206ENST00000541916 TMEM199Q8N511 208 aa9.51□□□□□ -0.89
FNDC3A-206ENST00000541916 FNDC3AQ9Y2H6 1198 aaKnown RBP9.51□□□□□ -0.89
FNDC3A-206ENST00000541916 IGSF3O75054 1194 aa9.51□□□□□ -0.89
FNDC3A-206ENST00000541916 TAF3Q5VWG9 929 aa9.51□□□□□ -0.89
FNDC3A-206ENST00000541916 LMBR1Q8WVP7 490 aa9.51□□□□□ -0.89
FNDC3A-206ENST00000541916 RNF26Q9BY78 433 aaPredicted RBP9.51□□□□□ -0.89
FNDC3A-206ENST00000541916 MIS12Q9H081 205 aa9.51□□□□□ -0.89
FNDC3A-206ENST00000541916 MTUS1Q9ULD2 1270 aa9.51□□□□□ -0.89
FNDC3A-206ENST00000541916 NDUFB10O96000 172 aa9.51□□□□□ -0.89
FNDC3A-206ENST00000541916 STAT5BP51692 787 aa9.51□□□□□ -0.89
FNDC3A-206ENST00000541916 KIF11P52732 1056 aa9.51□□□□□ -0.89
FNDC3A-206ENST00000541916 LAMC2Q13753 1193 aa9.51□□□□□ -0.89
FNDC3A-206ENST00000541916 C4orf50Q6ZRC1 276 aa9.51□□□□□ -0.89
FNDC3A-206ENST00000541916 TMC6Q7Z403 805 aa9.51□□□□□ -0.89
FNDC3A-206ENST00000541916 NYAP2Q9P242 653 aa9.51□□□□□ -0.89
FNDC3A-206ENST00000541916 USP25Q9UHP3 1055 aa9.51□□□□□ -0.89
FNDC3A-206ENST00000541916 GOLGA6L10A0A0M3HER8 536 aa9.51□□□□□ -0.89
FNDC3A-206ENST00000541916 E7EVH7 732 aa9.51□□□□□ -0.89
FNDC3A-206ENST00000541916 NDC80O14777 642 aa9.51□□□□□ -0.89
FNDC3A-206ENST00000541916 ZSCAN12O43309 604 aa9.51□□□□□ -0.89
FNDC3A-206ENST00000541916 CYLC1P35663 651 aaPredicted RBP9.51□□□□□ -0.89
FNDC3A-206ENST00000541916 KLRK1P26718 216 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 POLR2BP30876 1174 aaKnown RBP9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 KIAA0753Q2KHM9 967 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 ARMCX2Q7L311 632 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 NOSTRINQ8IVI9 506 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 CSGALNACT2Q8N6G5 542 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 TRPM4Q8TD43 1214 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 FAM50BQ9Y247 325 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 ZNF18P17022 549 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 FAM83AQ86UY5 434 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 NEDD1Q8NHV4 660 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 FBXL21Q9UKT6 434 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 NMT2O60551 498 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 CYP2C9P11712 490 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 HERVK_113P62684 666 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 SURF1Q15526 300 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 USP17L6PQ6QN14 398 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 GLB1LQ6UWU2 654 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 MSTO1Q9BUK6 570 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 C2orf40Q9H1Z8 148 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 JPH1Q9HDC5 661 aaPredicted RBP9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 ZNF233A6NK53 670 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 BNIP3LO60238 219 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 KPNA6O60684 536 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 PGK2P07205 417 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 ALDH7A1P49419 539 aaKnown RBP9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 C12orf60Q5U649 245 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 SCYL2Q6P3W7 929 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 BANK1Q8NDB2 785 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 BEST2Q8NFU1 509 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 SH3TC2Q8TF17 1288 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 CPVLQ9H3G5 476 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 FAM169AQ9Y6X4 670 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 AMHP03971 560 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 KRT10P13645 584 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 AKR1A1P14550 325 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 ZSCAN23Q3MJ62 389 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 CCDC91Q7Z6B0 441 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 CD99L2Q8TCZ2 262 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 DEFB118Q96PH6 123 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 LRRC4Q9HBW1 653 aa9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 CPSF3Q9UKF6 684 aaKnown RBP9.5□□□□□ -0.89
FNDC3A-206ENST00000541916 A0A1B0GVL5 298 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 GOLGA6CA6NDK9 693 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 GOLGA6BA6NDN3 693 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 N4BP1O75113 896 aaKnown RBP9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 GOLGA6DP0CG33 693 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 ARHGAP44Q17R89 818 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 TRIM50Q86XT4 487 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 GOLGA6AQ9NYA3 693 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 FZD1Q9UP38 647 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 PRRG1O14668 218 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 GAP43P17677 238 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 PRELPP51888 382 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 TMEM62Q0P6H9 643 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 VGLL4Q14135 290 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 APOA5Q6Q788 366 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 MCPH1Q8NEM0 835 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 FAM204AQ9H8W3 233 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 CIITAP33076 1130 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 UBASH3AP57075 661 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 ZNF568Q3ZCX4 644 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 PAN2Q504Q3 1202 aaKnown RBP9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 TMEM169Q96HH4 297 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 BLZF1Q9H2G9 400 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 IRAK4Q9NWZ3 460 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 USTQ9Y2C2 406 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 ZNF589Q86UQ0 364 aaPredicted RBP9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 SIX6OS1Q8N1H7 587 aa9.49□□□□□ -0.89
FNDC3A-206ENST00000541916 BBS5Q8N3I7 341 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms