RNA–Protein interactions for RNA: ENST00000541108.1

CLIP1-215, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-215ENST00000541108 KARSQ15046 597 aaKnown RBP19.97■□□□□ 0.79
CLIP1-215ENST00000541108 RRAGBQ5VZM2 374 aa19.97■□□□□ 0.79
CLIP1-215ENST00000541108 RASSF8Q8NHQ8 419 aa19.97■□□□□ 0.79
CLIP1-215ENST00000541108 IL31RAQ8NI17 732 aa19.97■□□□□ 0.79
CLIP1-215ENST00000541108 MMTAG2Q9BU76 263 aaKnown RBP19.97■□□□□ 0.79
CLIP1-215ENST00000541108 ADD3Q9UEY8 706 aaKnown RBP19.97■□□□□ 0.79
CLIP1-215ENST00000541108 SH3RF1Q7Z6J0 888 aa19.96■□□□□ 0.79
CLIP1-215ENST00000541108 PURBQ96QR8 312 aaKnown RBP19.96■□□□□ 0.79
CLIP1-215ENST00000541108 RIT2Q99578 217 aa19.96■□□□□ 0.79
CLIP1-215ENST00000541108 MAGEF1Q9HAY2 307 aa19.96■□□□□ 0.79
CLIP1-215ENST00000541108 KCNH7Q9NS40 1196 aa19.96■□□□□ 0.79
CLIP1-215ENST00000541108 PSMD10O75832 226 aa19.95■□□□□ 0.78
CLIP1-215ENST00000541108 STAT6P42226 847 aa19.95■□□□□ 0.78
CLIP1-215ENST00000541108 POSTNQ15063 836 aa19.95■□□□□ 0.78
CLIP1-215ENST00000541108 PDXDC2PQ6P474 469 aa19.95■□□□□ 0.78
CLIP1-215ENST00000541108 GJA10Q969M2 543 aa19.95■□□□□ 0.78
CLIP1-215ENST00000541108 ZNF577Q9BSK1 485 aa19.95■□□□□ 0.78
CLIP1-215ENST00000541108 TUBE1Q9UJT0 475 aa19.95■□□□□ 0.78
CLIP1-215ENST00000541108 FAM155AB1AL88 458 aaPredicted RBP19.94■□□□□ 0.78
CLIP1-215ENST00000541108 IPO5O00410 1097 aaKnown RBP19.94■□□□□ 0.78
CLIP1-215ENST00000541108 CAVIN2O95810 425 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 ARP10275 920 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 MYCLP12524 364 aaPredicted RBP19.94■□□□□ 0.78
CLIP1-215ENST00000541108 PPP2R5CQ13362 524 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 MTMR1Q13613 665 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 KCTD2Q14681 263 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 NAALADL2Q58DX5 795 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 HYIQ5T013 277 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 LRCH2Q5VUJ6 765 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 HAUS3Q68CZ6 603 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 OTOP1Q7RTM1 612 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 KCTD17Q8N5Z5 321 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 FAM133AQ8N9E0 248 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 PAGE5Q96GU1 130 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 WDR11Q9BZH6 1224 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 NT5C3AQ9H0P0 336 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 VAV3Q9UKW4 847 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 ABT1Q9ULW3 272 aaKnown RBP19.94■□□□□ 0.78
CLIP1-215ENST00000541108 KDM3AQ9Y4C1 1321 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 B4DLN1 442 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 POTEB2H3BUK9 544 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 MYL1P05976 194 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 FCER1AP12319 257 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 TYRO3Q06418 890 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 FAM110CQ1W6H9 321 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 NT5DC1Q5TFE4 455 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 NLRX1Q86UT6 975 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 ANKRD13CQ8N6S4 541 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 ERMNQ8TAM6 284 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 SNX29Q8TEQ0 813 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 GPRASP2Q96D09 838 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 INPP4AQ96PE3 977 aaPredicted RBP19.94■□□□□ 0.78
CLIP1-215ENST00000541108 STK17AQ9UEE5 414 aa19.94■□□□□ 0.78
CLIP1-215ENST00000541108 DNAJC25-GNG10A0A024R161 153 aa19.93■□□□□ 0.78
CLIP1-215ENST00000541108 LOC102724159A0A0B4J2E5 919 aa19.93■□□□□ 0.78
CLIP1-215ENST00000541108 STRNO43815 780 aa19.93■□□□□ 0.78
CLIP1-215ENST00000541108 GAS7O60861 476 aa19.93■□□□□ 0.78
CLIP1-215ENST00000541108 PWP2Q15269 919 aaKnown RBP19.93■□□□□ 0.78
CLIP1-215ENST00000541108 ZRSR1Q15695 479 aaKnown RBP19.93■□□□□ 0.78
CLIP1-215ENST00000541108 SPATA20Q8TB22 786 aa19.93■□□□□ 0.78
CLIP1-215ENST00000541108 CDK5RAP3Q96JB5 506 aa19.93■□□□□ 0.78
CLIP1-215ENST00000541108 CDHR1Q96JP9 859 aa19.93■□□□□ 0.78
CLIP1-215ENST00000541108 MMP19Q99542 508 aa19.93■□□□□ 0.78
CLIP1-215ENST00000541108 MPHOSPH6Q99547 160 aaKnown RBP19.93■□□□□ 0.78
CLIP1-215ENST00000541108 TBC1D22BQ9NU19 505 aa19.93■□□□□ 0.78
CLIP1-215ENST00000541108 PLCG1P19174 1290 aa19.92■□□□□ 0.78
CLIP1-215ENST00000541108 SARSP49591 514 aaKnown RBP19.92■□□□□ 0.78
CLIP1-215ENST00000541108 ALDH5A1P51649 535 aaPredicted RBP19.92■□□□□ 0.78
CLIP1-215ENST00000541108 CNTN2Q02246 1040 aa19.92■□□□□ 0.78
CLIP1-215ENST00000541108 SREBF2Q12772 1141 aa19.92■□□□□ 0.78
CLIP1-215ENST00000541108 PNOCQ13519 176 aa19.92■□□□□ 0.78
CLIP1-215ENST00000541108 STXBP2Q15833 593 aa19.92■□□□□ 0.78
CLIP1-215ENST00000541108 ABRAQ8N0Z2 381 aa19.92■□□□□ 0.78
CLIP1-215ENST00000541108 PORCNQ9H237 461 aa19.92■□□□□ 0.78
CLIP1-215ENST00000541108 AGO4Q9HCK5 861 aaKnown RBP19.92■□□□□ 0.78
CLIP1-215ENST00000541108 KBTBD4Q9NVX7 518 aa19.92■□□□□ 0.78
CLIP1-215ENST00000541108 PCDHA5Q9Y5H7 936 aa19.92■□□□□ 0.78
CLIP1-215ENST00000541108 LCTP09848 1927 aa19.92■□□□□ 0.78
CLIP1-215ENST00000541108 IGF2BP3O00425 579 aaKnown RBP eCLIP19.91■□□□□ 0.78
CLIP1-215ENST00000541108 FOXN1O15353 648 aa19.91■□□□□ 0.78
CLIP1-215ENST00000541108 EIF3JO75822 258 aaKnown RBP19.91■□□□□ 0.78
CLIP1-215ENST00000541108 EDNRBP24530 442 aa19.91■□□□□ 0.78
CLIP1-215ENST00000541108 RPA1P27694 616 aa19.91■□□□□ 0.78
CLIP1-215ENST00000541108 GRB10Q13322 594 aa19.91■□□□□ 0.78
CLIP1-215ENST00000541108 GNPTABQ3T906 1256 aa19.91■□□□□ 0.78
CLIP1-215ENST00000541108 B3GNT9Q6UX72 402 aa19.91■□□□□ 0.78
CLIP1-215ENST00000541108 IFNL1Q8IU54 200 aa19.91■□□□□ 0.78
CLIP1-215ENST00000541108 ZFP91Q96JP5 570 aaPredicted RBP19.91■□□□□ 0.78
CLIP1-215ENST00000541108 TEKT3Q9BXF9 490 aa19.91■□□□□ 0.78
CLIP1-215ENST00000541108 ANO10Q9NW15 660 aa19.91■□□□□ 0.78
CLIP1-215ENST00000541108 DHX15O43143 795 aaKnown RBP19.91■□□□□ 0.78
CLIP1-215ENST00000541108 SMC2O95347 1197 aa19.91■□□□□ 0.78
CLIP1-215ENST00000541108 CCT6AP40227 531 aaKnown RBP19.91■□□□□ 0.78
CLIP1-215ENST00000541108 MRE11P49959 708 aa19.91■□□□□ 0.78
CLIP1-215ENST00000541108 STX1AQ16623 288 aa19.91■□□□□ 0.78
CLIP1-215ENST00000541108 TMEM119Q4V9L6 283 aa19.91■□□□□ 0.78
CLIP1-215ENST00000541108 ERCC4Q92889 916 aaPredicted RBP19.91■□□□□ 0.78
CLIP1-215ENST00000541108 PNMA5Q96PV4 448 aa19.91■□□□□ 0.78
CLIP1-215ENST00000541108 UIMC1Q96RL1 719 aa19.91■□□□□ 0.78
CLIP1-215ENST00000541108 NUDT12Q9BQG2 462 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms