RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 AFG1LQ8WV93 481 aa15.03■□□□□ -0
LTBR-208ENST00000541005 EHMT1Q9H9B1 1298 aa15.03■□□□□ -0
LTBR-208ENST00000541005 PRKAG2Q9UGJ0 569 aa15.03■□□□□ -0
LTBR-208ENST00000541005 TBX21Q9UL17 535 aa15.03■□□□□ -0
LTBR-208ENST00000541005 TPCN1Q9ULQ1 816 aa15.03■□□□□ -0
LTBR-208ENST00000541005 PCDHA6Q9UN73 950 aa15.03■□□□□ -0
LTBR-208ENST00000541005 PCDHA8Q9Y5H6 950 aa15.03■□□□□ -0
LTBR-208ENST00000541005 TRIM43BA6NCK2 446 aa15.02■□□□□ -0
LTBR-208ENST00000541005 PFKFB2O60825 505 aa15.02■□□□□ -0
LTBR-208ENST00000541005 CD4P01730 458 aa15.02■□□□□ -0
LTBR-208ENST00000541005 AK2P54819 239 aa15.02■□□□□ -0
LTBR-208ENST00000541005 AKAP17AQ02040 695 aaKnown RBP15.02■□□□□ -0
LTBR-208ENST00000541005 SP2Q02086 613 aa15.02■□□□□ -0
LTBR-208ENST00000541005 TRIM22Q8IYM9 498 aa15.02■□□□□ -0
LTBR-208ENST00000541005 CCDC148Q8NFR7 591 aa15.02■□□□□ -0
LTBR-208ENST00000541005 VTI1AQ96AJ9 217 aa15.02■□□□□ -0
LTBR-208ENST00000541005 TRIM43Q96BQ3 446 aaPredicted RBP15.02■□□□□ -0
LTBR-208ENST00000541005 GPRASP2Q96D09 838 aa15.02■□□□□ -0
LTBR-208ENST00000541005 SLC26A6Q9BXS9 759 aa15.02■□□□□ -0
LTBR-208ENST00000541005 SH3GLB2Q9NR46 395 aa15.02■□□□□ -0
LTBR-208ENST00000541005 UBIAD1Q9Y5Z9 338 aa15.02■□□□□ -0
LTBR-208ENST00000541005 STK36Q9NRP7 1315 aa15.01□□□□□ -0.01
LTBR-208ENST00000541005 SCN5AQ14524 2016 aa15.01□□□□□ -0.01
LTBR-208ENST00000541005 CPLX1O14810 134 aa15.01□□□□□ -0.01
LTBR-208ENST00000541005 GGPS1O95749 300 aa15.01□□□□□ -0.01
LTBR-208ENST00000541005 MYL3P08590 195 aa15.01□□□□□ -0.01
LTBR-208ENST00000541005 SREBF1P36956 1147 aa15.01□□□□□ -0.01
LTBR-208ENST00000541005 SCRN1Q12765 414 aa15.01□□□□□ -0.01
LTBR-208ENST00000541005 DGKDQ16760 1214 aa15.01□□□□□ -0.01
LTBR-208ENST00000541005 HABP4Q5JVS0 413 aaKnown RBP15.01□□□□□ -0.01
LTBR-208ENST00000541005 MCTP2Q6DN12 878 aa15.01□□□□□ -0.01
LTBR-208ENST00000541005 NFRKBQ6P4R8 1299 aa15.01□□□□□ -0.01
LTBR-208ENST00000541005 CPLX2Q6PUV4 134 aaKnown RBP15.01□□□□□ -0.01
LTBR-208ENST00000541005 METTL7BQ6UX53 244 aa15.01□□□□□ -0.01
LTBR-208ENST00000541005 SH3RF1Q7Z6J0 888 aa15.01□□□□□ -0.01
LTBR-208ENST00000541005 NLRX1Q86UT6 975 aa15.01□□□□□ -0.01
LTBR-208ENST00000541005 DHX37Q8IY37 1157 aaKnown RBP15.01□□□□□ -0.01
LTBR-208ENST00000541005 ZFP91Q96JP5 570 aaPredicted RBP15.01□□□□□ -0.01
LTBR-208ENST00000541005 CDHR1Q96JP9 859 aa15.01□□□□□ -0.01
LTBR-208ENST00000541005 SENP7Q9BQF6 1050 aa15.01□□□□□ -0.01
LTBR-208ENST00000541005 LARP6Q9BRS8 491 aaKnown RBP15.01□□□□□ -0.01
LTBR-208ENST00000541005 ANO3Q9BYT9 981 aa15.01□□□□□ -0.01
LTBR-208ENST00000541005 PRDM5Q9NQX1 630 aaPredicted RBP15.01□□□□□ -0.01
LTBR-208ENST00000541005 TLR3O15455 904 aaKnown RBP15□□□□□ -0.01
LTBR-208ENST00000541005 CDKL5O76039 1030 aa15□□□□□ -0.01
LTBR-208ENST00000541005 DEXIO95424 95 aa15□□□□□ -0.01
LTBR-208ENST00000541005 F2P00734 622 aa15□□□□□ -0.01
LTBR-208ENST00000541005 ITGB5P18084 799 aa15□□□□□ -0.01
LTBR-208ENST00000541005 GNA11P29992 359 aa15□□□□□ -0.01
LTBR-208ENST00000541005 PSMC6P62333 389 aa15□□□□□ -0.01
LTBR-208ENST00000541005 SSRP1Q08945 709 aaKnown RBP15□□□□□ -0.01
LTBR-208ENST00000541005 NEDD9Q14511 834 aa15□□□□□ -0.01
LTBR-208ENST00000541005 REXO1Q8N1G1 1221 aaKnown RBP15□□□□□ -0.01
LTBR-208ENST00000541005 CRYGNQ8WXF5 182 aa15□□□□□ -0.01
LTBR-208ENST00000541005 KAT2BQ92831 832 aa15□□□□□ -0.01
LTBR-208ENST00000541005 LBHD1Q9BQE6 289 aaPredicted RBP15□□□□□ -0.01
LTBR-208ENST00000541005 SLKQ9H2G2 1235 aaPredicted RBP15□□□□□ -0.01
LTBR-208ENST00000541005 C6orf50Q9HD87 102 aa15□□□□□ -0.01
LTBR-208ENST00000541005 RTEL1Q9NZ71 1219 aa15□□□□□ -0.01
LTBR-208ENST00000541005 MAFGO15525 162 aa14.99□□□□□ -0.01
LTBR-208ENST00000541005 PPFIA4O75335 1185 aa14.99□□□□□ -0.01
LTBR-208ENST00000541005 KCNA2P16389 499 aa14.99□□□□□ -0.01
LTBR-208ENST00000541005 RBM25P49756 843 aaKnown RBP14.99□□□□□ -0.01
LTBR-208ENST00000541005 NEK4P51957 841 aa14.99□□□□□ -0.01
LTBR-208ENST00000541005 MDM2Q00987 491 aaPredicted RBP14.99□□□□□ -0.01
LTBR-208ENST00000541005 PTPN11Q06124 597 aaPredicted RBP14.99□□□□□ -0.01
LTBR-208ENST00000541005 STK3Q13188 491 aa14.99□□□□□ -0.01
LTBR-208ENST00000541005 HSDL1Q3SXM5 330 aa14.99□□□□□ -0.01
LTBR-208ENST00000541005 SESTD1Q86VW0 696 aa14.99□□□□□ -0.01
LTBR-208ENST00000541005 GIMAP8Q8ND71 665 aaPredicted RBP14.99□□□□□ -0.01
LTBR-208ENST00000541005 BICD2Q8TD16 824 aa14.99□□□□□ -0.01
LTBR-208ENST00000541005 SPATA33Q96N06 139 aa14.99□□□□□ -0.01
LTBR-208ENST00000541005 KIF2CQ99661 725 aa14.99□□□□□ -0.01
LTBR-208ENST00000541005 JADE2Q9NQC1 790 aa14.99□□□□□ -0.01
LTBR-208ENST00000541005 TMEM39AQ9NV64 488 aa14.99□□□□□ -0.01
LTBR-208ENST00000541005 TET1Q8NFU7 2136 aa14.98□□□□□ -0.01
LTBR-208ENST00000541005 HAS3O00219 553 aa14.98□□□□□ -0.01
LTBR-208ENST00000541005 B4GALT4O60513 344 aa14.98□□□□□ -0.01
LTBR-208ENST00000541005 ITGB8P26012 769 aa14.98□□□□□ -0.01
LTBR-208ENST00000541005 MTMR1Q13613 665 aa14.98□□□□□ -0.01
LTBR-208ENST00000541005 NBPF20Q3BBV1 942 aa14.98□□□□□ -0.01
LTBR-208ENST00000541005 GTF3C6Q969F1 213 aa14.98□□□□□ -0.01
LTBR-208ENST00000541005 KATNAL1Q9BW62 490 aa14.98□□□□□ -0.01
LTBR-208ENST00000541005 MLXIPQ9HAP2 919 aa14.98□□□□□ -0.01
LTBR-208ENST00000541005 TMEM260Q9NX78 707 aa14.98□□□□□ -0.01
LTBR-208ENST00000541005 VPS54Q9P1Q0 977 aa14.98□□□□□ -0.01
LTBR-208ENST00000541005 PCDH10Q9P2E7 1040 aa14.98□□□□□ -0.01
LTBR-208ENST00000541005 ADAMTS3O15072 1205 aa14.97□□□□□ -0.01
LTBR-208ENST00000541005 PPFIA3O75145 1194 aa14.97□□□□□ -0.01
LTBR-208ENST00000541005 CTDNEP1O95476 244 aa14.97□□□□□ -0.01
LTBR-208ENST00000541005 TIMP1P01033 207 aa14.97□□□□□ -0.01
LTBR-208ENST00000541005 CYP3A4P08684 503 aa14.97□□□□□ -0.01
LTBR-208ENST00000541005 ZNF286BP0CG31 522 aa14.97□□□□□ -0.01
LTBR-208ENST00000541005 RAG1P15918 1043 aa14.97□□□□□ -0.01
LTBR-208ENST00000541005 ARHGAP4P98171 946 aa14.97□□□□□ -0.01
LTBR-208ENST00000541005 ME3Q16798 604 aa14.97□□□□□ -0.01
LTBR-208ENST00000541005 CEP55Q53EZ4 464 aa14.97□□□□□ -0.01
LTBR-208ENST00000541005 JAKMIP3Q5VZ66 844 aa14.97□□□□□ -0.01
LTBR-208ENST00000541005 NIPA1Q7RTP0 329 aa14.97□□□□□ -0.01
LTBR-208ENST00000541005 DAGLBQ8NCG7 672 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms