RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 AK2P54819 239 aa6.58□□□□□ -1.36
PRKDC-209ENST00000540819 MESP2Q0VG99 397 aa6.58□□□□□ -1.36
PRKDC-209ENST00000540819 FAPQ12884 760 aa6.58□□□□□ -1.36
PRKDC-209ENST00000540819 NKPD1Q17RQ9 610 aa6.58□□□□□ -1.36
PRKDC-209ENST00000540819 ABCB5Q2M3G0 1257 aa6.58□□□□□ -1.36
PRKDC-209ENST00000540819 RGL3Q3MIN7 710 aa6.58□□□□□ -1.36
PRKDC-209ENST00000540819 GNPTABQ3T906 1256 aa6.58□□□□□ -1.36
PRKDC-209ENST00000540819 ZBTB37Q5TC79 503 aa6.58□□□□□ -1.36
PRKDC-209ENST00000540819 BRAPQ7Z569 592 aa6.58□□□□□ -1.36
PRKDC-209ENST00000540819 ANKLE2Q86XL3 938 aa6.58□□□□□ -1.36
PRKDC-209ENST00000540819 GSTCDQ8NEC7 633 aa6.58□□□□□ -1.36
PRKDC-209ENST00000540819 SLC7A14Q8TBB6 771 aa6.58□□□□□ -1.36
PRKDC-209ENST00000540819 FUBP3Q96I24 572 aaKnown RBP eCLIP6.58□□□□□ -1.36
PRKDC-209ENST00000540819 CACNA2D2Q9NY47 1150 aa6.58□□□□□ -1.36
PRKDC-209ENST00000540819 ASAP1Q9ULH1 1129 aa6.58□□□□□ -1.36
PRKDC-209ENST00000540819 ZBTB21Q9ULJ3 1066 aa6.58□□□□□ -1.36
PRKDC-209ENST00000540819 CTNND2Q9UQB3 1225 aa6.58□□□□□ -1.36
PRKDC-209ENST00000540819 RABGAP1Q9Y3P9 1069 aa6.58□□□□□ -1.36
PRKDC-209ENST00000540819 DGKBQ9Y6T7 804 aa6.58□□□□□ -1.36
PRKDC-209ENST00000540819 DYTNA2CJ06 578 aa6.57□□□□□ -1.36
PRKDC-209ENST00000540819 ZNF503-AS2A6NEH8 195 aa6.57□□□□□ -1.36
PRKDC-209ENST00000540819 PRKD3O94806 890 aa6.57□□□□□ -1.36
PRKDC-209ENST00000540819 LRIG2O94898 1065 aa6.57□□□□□ -1.36
PRKDC-209ENST00000540819 MYBL2P10244 700 aa6.57□□□□□ -1.36
PRKDC-209ENST00000540819 SCNN1BP51168 640 aa6.57□□□□□ -1.36
PRKDC-209ENST00000540819 PPP2R2AP63151 447 aa6.57□□□□□ -1.36
PRKDC-209ENST00000540819 ADCY1Q08828 1119 aa6.57□□□□□ -1.36
PRKDC-209ENST00000540819 KRTAP19-4Q3LI73 84 aa6.57□□□□□ -1.36
PRKDC-209ENST00000540819 CFAP100Q494V2 611 aa6.57□□□□□ -1.36
PRKDC-209ENST00000540819 TTLL5Q6EMB2 1281 aa6.57□□□□□ -1.36
PRKDC-209ENST00000540819 OVOS1Q6IE37 1185 aa6.57□□□□□ -1.36
PRKDC-209ENST00000540819 CYB5RLQ6IPT4 315 aa6.57□□□□□ -1.36
PRKDC-209ENST00000540819 MPZL3Q6UWV2 235 aa6.57□□□□□ -1.36
PRKDC-209ENST00000540819 UBE2R2Q712K3 238 aaPredicted RBP6.57□□□□□ -1.36
PRKDC-209ENST00000540819 CYFIP1Q7L576 1253 aa6.57□□□□□ -1.36
PRKDC-209ENST00000540819 NLRC3Q7RTR2 1065 aa6.57□□□□□ -1.36
PRKDC-209ENST00000540819 FAM186BQ8IYM0 893 aa6.57□□□□□ -1.36
PRKDC-209ENST00000540819 CBARPQ8N350 705 aaPredicted RBP6.57□□□□□ -1.36
PRKDC-209ENST00000540819 SDR16C5Q8N3Y7 309 aa6.57□□□□□ -1.36
PRKDC-209ENST00000540819 ATG4CQ96DT6 458 aa6.57□□□□□ -1.36
PRKDC-209ENST00000540819 TOX2Q96NM4 488 aa6.57□□□□□ -1.36
PRKDC-209ENST00000540819 PPP1R16BQ96T49 567 aa6.57□□□□□ -1.36
PRKDC-209ENST00000540819 NUP88Q99567 741 aaPredicted RBP6.57□□□□□ -1.36
PRKDC-209ENST00000540819 CNNM2Q9H8M5 875 aa6.57□□□□□ -1.36
PRKDC-209ENST00000540819 CRTAC1Q9NQ79 661 aa6.57□□□□□ -1.36
PRKDC-209ENST00000540819 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.57□□□□□ -1.36
PRKDC-209ENST00000540819 NDOR1Q9UHB4 597 aa6.57□□□□□ -1.36
PRKDC-209ENST00000540819 ZNF214Q9UL59 606 aaPredicted RBP6.57□□□□□ -1.36
PRKDC-209ENST00000540819 DMTF1Q9Y222 760 aa6.57□□□□□ -1.36
PRKDC-209ENST00000540819 PITPNM2Q9BZ72 1349 aa6.56□□□□□ -1.36
PRKDC-209ENST00000540819 EOMESO95936 686 aa6.56□□□□□ -1.36
PRKDC-209ENST00000540819 JMJD7P0C870 316 aa6.56□□□□□ -1.36
PRKDC-209ENST00000540819 PABPC1P11940 636 aaKnown RBP6.56□□□□□ -1.36
PRKDC-209ENST00000540819 ID4P47928 161 aa6.56□□□□□ -1.36
PRKDC-209ENST00000540819 RENBPP51606 427 aa6.56□□□□□ -1.36
PRKDC-209ENST00000540819 GABREP78334 506 aa6.56□□□□□ -1.36
PRKDC-209ENST00000540819 RING1Q06587 406 aa6.56□□□□□ -1.36
PRKDC-209ENST00000540819 GALEQ14376 348 aa6.56□□□□□ -1.36
PRKDC-209ENST00000540819 ZNF460Q14592 562 aa6.56□□□□□ -1.36
PRKDC-209ENST00000540819 INAVAQ3KP66 663 aa6.56□□□□□ -1.36
PRKDC-209ENST00000540819 BBS9Q3SYG4 887 aa6.56□□□□□ -1.36
PRKDC-209ENST00000540819 CCDC93Q567U6 631 aa6.56□□□□□ -1.36
PRKDC-209ENST00000540819 CDCP2Q5VXM1 449 aa6.56□□□□□ -1.36
PRKDC-209ENST00000540819 JAKMIP3Q5VZ66 844 aa6.56□□□□□ -1.36
PRKDC-209ENST00000540819 IQSEC1Q6DN90 963 aa6.56□□□□□ -1.36
PRKDC-209ENST00000540819 NSMFQ6X4W1 530 aa6.56□□□□□ -1.36
PRKDC-209ENST00000540819 RINLQ6ZS11 566 aa6.56□□□□□ -1.36
PRKDC-209ENST00000540819 ARMCX6Q7L4S7 300 aa6.56□□□□□ -1.36
PRKDC-209ENST00000540819 SRLQ86TD4 932 aa6.56□□□□□ -1.36
PRKDC-209ENST00000540819 NKAPQ8N5F7 415 aaKnown RBP6.56□□□□□ -1.36
PRKDC-209ENST00000540819 ZSCAN18Q8TBC5 510 aaPredicted RBP6.56□□□□□ -1.36
PRKDC-209ENST00000540819 ERP27Q96DN0 273 aa6.56□□□□□ -1.36
PRKDC-209ENST00000540819 LIN37Q96GY3 246 aaPredicted RBP6.56□□□□□ -1.36
PRKDC-209ENST00000540819 KIRREL1Q96J84 757 aa6.56□□□□□ -1.36
PRKDC-209ENST00000540819 MYD88Q99836 296 aa6.56□□□□□ -1.36
PRKDC-209ENST00000540819 RSPH9Q9H1X1 276 aaPredicted RBP6.56□□□□□ -1.36
PRKDC-209ENST00000540819 CARS2Q9HA77 564 aaKnown RBP6.56□□□□□ -1.36
PRKDC-209ENST00000540819 SLC52A2Q9HAB3 445 aa6.56□□□□□ -1.36
PRKDC-209ENST00000540819 ANLNQ9NQW6 1124 aa6.56□□□□□ -1.36
PRKDC-209ENST00000540819 C1orf112Q9NSG2 853 aa6.56□□□□□ -1.36
PRKDC-209ENST00000540819 ANKRD34BA5PLL1 514 aa6.55□□□□□ -1.36
PRKDC-209ENST00000540819 B4E1Z4 1266 aa6.55□□□□□ -1.36
PRKDC-209ENST00000540819 LTFP02788 710 aa6.55□□□□□ -1.36
PRKDC-209ENST00000540819 GLI1P08151 1106 aa6.55□□□□□ -1.36
PRKDC-209ENST00000540819 C6orf222P0C671 652 aaPredicted RBP6.55□□□□□ -1.36
PRKDC-209ENST00000540819 NTF4P34130 210 aa6.55□□□□□ -1.36
PRKDC-209ENST00000540819 KRT85P78386 507 aa6.55□□□□□ -1.36
PRKDC-209ENST00000540819 DDX10Q13206 875 aaKnown RBP6.55□□□□□ -1.36
PRKDC-209ENST00000540819 DACT2Q5SW24 774 aa6.55□□□□□ -1.36
PRKDC-209ENST00000540819 SFRP5Q5T4F7 317 aa6.55□□□□□ -1.36
PRKDC-209ENST00000540819 CDKAL1Q5VV42 579 aa6.55□□□□□ -1.36
PRKDC-209ENST00000540819 MZT2AQ6P582 158 aa6.55□□□□□ -1.36
PRKDC-209ENST00000540819 SPOCD1Q6ZMY3 1216 aa6.55□□□□□ -1.36
PRKDC-209ENST00000540819 FGD2Q7Z6J4 655 aa6.55□□□□□ -1.36
PRKDC-209ENST00000540819 UBE3DQ7Z6J8 389 aa6.55□□□□□ -1.36
PRKDC-209ENST00000540819 KIF18BQ86Y91 864 aa6.55□□□□□ -1.36
PRKDC-209ENST00000540819 CLASRPQ8N2M8 674 aaKnown RBP6.55□□□□□ -1.36
PRKDC-209ENST00000540819 FAM43AQ8N2R8 423 aa6.55□□□□□ -1.36
PRKDC-209ENST00000540819 ACRBPQ8NEB7 543 aa6.55□□□□□ -1.36
PRKDC-209ENST00000540819 NGDNQ8NEJ9 315 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms