RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 MORC3Q14149 939 aa15.59■□□□□ 0.09
COLCA1-204ENST00000540738 SLC10A5Q5PT55 438 aa15.59■□□□□ 0.09
COLCA1-204ENST00000540738 TRIM50Q86XT4 487 aa15.59■□□□□ 0.09
COLCA1-204ENST00000540738 LBHD1Q9BQE6 289 aaPredicted RBP15.59■□□□□ 0.09
COLCA1-204ENST00000540738 ATP6V0A4Q9HBG4 840 aa15.59■□□□□ 0.09
COLCA1-204ENST00000540738 POLR3EQ9NVU0 708 aa15.59■□□□□ 0.09
COLCA1-204ENST00000540738 MFAP3P55082 362 aa15.59■□□□□ 0.09
COLCA1-204ENST00000540738 TNFAIP2Q03169 654 aa15.59■□□□□ 0.09
COLCA1-204ENST00000540738 PTK2Q05397 1052 aa15.59■□□□□ 0.09
COLCA1-204ENST00000540738 CDC42EP5Q6NZY7 148 aa15.59■□□□□ 0.09
COLCA1-204ENST00000540738 RPF1Q9H9Y2 349 aaKnown RBP15.59■□□□□ 0.09
COLCA1-204ENST00000540738 KIAA1210Q9ULL0 1709 aa15.59■□□□□ 0.09
COLCA1-204ENST00000540738 DENND3A2RUS2 1198 aa15.59■□□□□ 0.09
COLCA1-204ENST00000540738 CCDC63Q8NA47 563 aa15.59■□□□□ 0.09
COLCA1-204ENST00000540738 IFT122Q9HBG6 1241 aa15.59■□□□□ 0.09
COLCA1-204ENST00000540738 FAM207AQ9NSI2 230 aaPredicted RBP15.59■□□□□ 0.09
COLCA1-204ENST00000540738 CEMIPQ8WUJ3 1361 aa15.58■□□□□ 0.09
COLCA1-204ENST00000540738 ATG9AQ7Z3C6 839 aa15.58■□□□□ 0.09
COLCA1-204ENST00000540738 URGCPQ8TCY9 931 aa15.58■□□□□ 0.09
COLCA1-204ENST00000540738 KCNJ18B7U540 433 aa15.58■□□□□ 0.08
COLCA1-204ENST00000540738 TUBBP07437 444 aa15.58■□□□□ 0.08
COLCA1-204ENST00000540738 AKR1B1P15121 316 aa15.58■□□□□ 0.08
COLCA1-204ENST00000540738 ERCC3P19447 782 aa15.58■□□□□ 0.08
COLCA1-204ENST00000540738 ANXA13P27216 316 aa15.58■□□□□ 0.08
COLCA1-204ENST00000540738 KCNJ12Q14500 433 aa15.58■□□□□ 0.08
COLCA1-204ENST00000540738 TDRD7Q8NHU6 1098 aaKnown RBP15.58■□□□□ 0.08
COLCA1-204ENST00000540738 LDHAP00338 332 aaKnown RBP15.58■□□□□ 0.08
COLCA1-204ENST00000540738 SRGAP2CP0DJJ0 459 aa15.58■□□□□ 0.08
COLCA1-204ENST00000540738 KIF23Q02241 960 aaPredicted RBP15.58■□□□□ 0.08
COLCA1-204ENST00000540738 RRAGAQ7L523 313 aa15.58■□□□□ 0.08
COLCA1-204ENST00000540738 FBXO33Q7Z6M2 555 aa15.58■□□□□ 0.08
COLCA1-204ENST00000540738 NBPF11Q86T75 865 aa15.58■□□□□ 0.08
COLCA1-204ENST00000540738 VPS33BQ9H267 617 aa15.58■□□□□ 0.08
COLCA1-204ENST00000540738 NYAP2Q9P242 653 aa15.58■□□□□ 0.08
COLCA1-204ENST00000540738 PCDHA7Q9UN72 937 aa15.58■□□□□ 0.08
COLCA1-204ENST00000540738 PPP2R3BQ9Y5P8 575 aa15.58■□□□□ 0.08
COLCA1-204ENST00000540738 NECTIN1Q15223 517 aa15.58■□□□□ 0.08
COLCA1-204ENST00000540738 PFKFB3Q16875 520 aaPredicted RBP15.58■□□□□ 0.08
COLCA1-204ENST00000540738 CCDC51Q96ER9 411 aa15.58■□□□□ 0.08
COLCA1-204ENST00000540738 DISC1Q9NRI5 854 aa15.58■□□□□ 0.08
COLCA1-204ENST00000540738 SLC12A6Q9UHW9 1150 aa15.58■□□□□ 0.08
COLCA1-204ENST00000540738 FLT1P17948 1338 aa15.58■□□□□ 0.08
COLCA1-204ENST00000540738 PRELPP51888 382 aa15.57■□□□□ 0.08
COLCA1-204ENST00000540738 PPP2R3CQ969Q6 453 aa15.57■□□□□ 0.08
COLCA1-204ENST00000540738 GSG1L2A8MUP6 293 aa15.57■□□□□ 0.08
COLCA1-204ENST00000540738 VAV2P52735 878 aa15.57■□□□□ 0.08
COLCA1-204ENST00000540738 TFAMQ00059 246 aaKnown RBP15.57■□□□□ 0.08
COLCA1-204ENST00000540738 MYL7Q01449 175 aa15.57■□□□□ 0.08
COLCA1-204ENST00000540738 NLRC4Q9NPP4 1024 aa15.57■□□□□ 0.08
COLCA1-204ENST00000540738 ZNF302Q9NR11 478 aa15.57■□□□□ 0.08
COLCA1-204ENST00000540738 ACTN4O43707 911 aaKnown RBP15.57■□□□□ 0.08
COLCA1-204ENST00000540738 PSMD2Q13200 908 aa15.57■□□□□ 0.08
COLCA1-204ENST00000540738 QRICH1Q2TAL8 776 aa15.57■□□□□ 0.08
COLCA1-204ENST00000540738 SBK1Q52WX2 424 aa15.57■□□□□ 0.08
COLCA1-204ENST00000540738 SPECC1LQ69YQ0 1117 aa15.57■□□□□ 0.08
COLCA1-204ENST00000540738 ARMCX2Q7L311 632 aa15.57■□□□□ 0.08
COLCA1-204ENST00000540738 TBC1D10CQ8IV04 446 aa15.57■□□□□ 0.08
COLCA1-204ENST00000540738 KATNAL1Q9BW62 490 aa15.57■□□□□ 0.08
COLCA1-204ENST00000540738 IMPACTQ9P2X3 320 aa15.57■□□□□ 0.08
COLCA1-204ENST00000540738 SLU7O95391 586 aaKnown RBP15.57■□□□□ 0.08
COLCA1-204ENST00000540738 PLEKHA8P1O95397 391 aa15.57■□□□□ 0.08
COLCA1-204ENST00000540738 SAMD7Q7Z3H4 446 aa15.57■□□□□ 0.08
COLCA1-204ENST00000540738 BBS5Q8N3I7 341 aa15.57■□□□□ 0.08
COLCA1-204ENST00000540738 SPATA33Q96N06 139 aa15.57■□□□□ 0.08
COLCA1-204ENST00000540738 C2orf40Q9H1Z8 148 aa15.57■□□□□ 0.08
COLCA1-204ENST00000540738 TSKSQ9UJT2 592 aa15.57■□□□□ 0.08
COLCA1-204ENST00000540738 FCGRTP55899 365 aa15.57■□□□□ 0.08
COLCA1-204ENST00000540738 KRT81Q14533 505 aa15.57■□□□□ 0.08
COLCA1-204ENST00000540738 DSTYKQ6XUX3 929 aa15.57■□□□□ 0.08
COLCA1-204ENST00000540738 ENAHQ8N8S7 591 aaPredicted RBP15.57■□□□□ 0.08
COLCA1-204ENST00000540738 GPRC5AQ8NFJ5 357 aa15.57■□□□□ 0.08
COLCA1-204ENST00000540738 RAB3IL1Q8TBN0 382 aa15.57■□□□□ 0.08
COLCA1-204ENST00000540738 PSPC1Q8WXF1 523 aaKnown RBP15.57■□□□□ 0.08
COLCA1-204ENST00000540738 SECISBP2LQ93073 1101 aaKnown RBP15.57■□□□□ 0.08
COLCA1-204ENST00000540738 DHTKD1Q96HY7 919 aaPredicted RBP15.57■□□□□ 0.08
COLCA1-204ENST00000540738 ITSN1Q15811 1721 aa15.56■□□□□ 0.08
COLCA1-204ENST00000540738 STK36Q9NRP7 1315 aa15.56■□□□□ 0.08
COLCA1-204ENST00000540738 PLA2G4BP0C869 781 aa15.56■□□□□ 0.08
COLCA1-204ENST00000540738 LDHDQ86WU2 507 aa15.56■□□□□ 0.08
COLCA1-204ENST00000540738 HAUS1Q96CS2 278 aa15.56■□□□□ 0.08
COLCA1-204ENST00000540738 FAM184BQ9ULE4 1060 aa15.56■□□□□ 0.08
COLCA1-204ENST00000540738 ARHGAP23Q9P227 1491 aa15.56■□□□□ 0.08
COLCA1-204ENST00000540738 RNF8O76064 485 aa15.56■□□□□ 0.08
COLCA1-204ENST00000540738 NR2F2P24468 414 aa15.56■□□□□ 0.08
COLCA1-204ENST00000540738 TRMT44Q8IYL2 757 aaKnown RBP15.56■□□□□ 0.08
COLCA1-204ENST00000540738 FAM186BQ8IYM0 893 aa15.56■□□□□ 0.08
COLCA1-204ENST00000540738 MYO1AQ9UBC5 1043 aa15.56■□□□□ 0.08
COLCA1-204ENST00000540738 SRGNP10124 158 aa15.56■□□□□ 0.08
COLCA1-204ENST00000540738 MAPK6Q16659 721 aa15.56■□□□□ 0.08
COLCA1-204ENST00000540738 CAPZA3Q96KX2 299 aa15.56■□□□□ 0.08
COLCA1-204ENST00000540738 CLIC6Q96NY7 704 aa15.56■□□□□ 0.08
COLCA1-204ENST00000540738 FEZ2Q9UHY8 353 aaPredicted RBP15.56■□□□□ 0.08
COLCA1-204ENST00000540738 ODF2LQ9ULJ1 636 aa15.56■□□□□ 0.08
COLCA1-204ENST00000540738 TWF2Q6IBS0 349 aaKnown RBP15.56■□□□□ 0.08
COLCA1-204ENST00000540738 NUDT12Q9BQG2 462 aa15.56■□□□□ 0.08
COLCA1-204ENST00000540738 CLIC4Q9Y696 253 aa15.56■□□□□ 0.08
COLCA1-204ENST00000540738 NEDD4P46934 1319 aa15.56■□□□□ 0.08
COLCA1-204ENST00000540738 TMEM131LA2VDJ0 1609 aa15.56■□□□□ 0.08
COLCA1-204ENST00000540738 MEIS1O00470 390 aa15.55■□□□□ 0.08
COLCA1-204ENST00000540738 CDC42EP1Q00587 391 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms