RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 RIOX1Q9H6W3 641 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 hCG_1984214I3L0E3 225 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 NCK2O43639 380 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 NOVP48745 357 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 KCNMA1Q12791 1236 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 ZNF713Q8N859 430 aaPredicted RBP13.6□□□□□ -0.23
NPC1-202ENST00000540608 PPM1EQ8WY54 764 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 SYN2Q92777 582 aaPredicted RBP13.6□□□□□ -0.23
NPC1-202ENST00000540608 PSMB7Q99436 277 aa13.6□□□□□ -0.23
NPC1-202ENST00000540608 NUCKS1Q9H1E3 243 aaKnown RBP13.6□□□□□ -0.23
NPC1-202ENST00000540608 SNED1Q8TER0 1413 aa13.59□□□□□ -0.23
NPC1-202ENST00000540608 MYH10P35580 1976 aa13.59□□□□□ -0.23
NPC1-202ENST00000540608 RFC4P35249 363 aa13.59□□□□□ -0.23
NPC1-202ENST00000540608 NNTQ13423 1086 aa13.59□□□□□ -0.23
NPC1-202ENST00000540608 ZNF804AQ7Z570 1209 aa13.59□□□□□ -0.23
NPC1-202ENST00000540608 ANKRD13CQ8N6S4 541 aa13.59□□□□□ -0.23
NPC1-202ENST00000540608 DDX12PQ92771 950 aa13.59□□□□□ -0.23
NPC1-202ENST00000540608 MTMR8Q96EF0 704 aa13.59□□□□□ -0.23
NPC1-202ENST00000540608 CAPS2Q9BXY5 557 aa13.59□□□□□ -0.23
NPC1-202ENST00000540608 SMARCAL1Q9NZC9 954 aa13.59□□□□□ -0.23
NPC1-202ENST00000540608 SLC37A4O43826 429 aa13.59□□□□□ -0.23
NPC1-202ENST00000540608 EDIL3O43854 480 aa13.59□□□□□ -0.23
NPC1-202ENST00000540608 BTDP43251 543 aa13.59□□□□□ -0.23
NPC1-202ENST00000540608 MRPS25P82663 173 aaKnown RBP13.59□□□□□ -0.23
NPC1-202ENST00000540608 SF3B2Q13435 895 aaKnown RBP13.59□□□□□ -0.23
NPC1-202ENST00000540608 CFAP221Q4G0U5 840 aa13.59□□□□□ -0.23
NPC1-202ENST00000540608 KRT79Q5XKE5 535 aa13.59□□□□□ -0.23
NPC1-202ENST00000540608 CEP95Q96GE4 821 aa13.59□□□□□ -0.23
NPC1-202ENST00000540608 UBA5Q9GZZ9 404 aa13.59□□□□□ -0.23
NPC1-202ENST00000540608 FAM107BQ9H098 131 aa13.59□□□□□ -0.23
NPC1-202ENST00000540608 EHD2Q9NZN4 543 aa13.59□□□□□ -0.23
NPC1-202ENST00000540608 USP17L5A8MUK1 530 aa13.58□□□□□ -0.24
NPC1-202ENST00000540608 HSF2BPO75031 334 aa13.58□□□□□ -0.24
NPC1-202ENST00000540608 SLC1A4P43007 532 aa13.58□□□□□ -0.24
NPC1-202ENST00000540608 NOP2P46087 812 aaKnown RBP13.58□□□□□ -0.24
NPC1-202ENST00000540608 GPSM2P81274 684 aa13.58□□□□□ -0.24
NPC1-202ENST00000540608 ATP2B2Q01814 1243 aa13.58□□□□□ -0.24
NPC1-202ENST00000540608 SLC9C1Q4G0N8 1177 aa13.58□□□□□ -0.24
NPC1-202ENST00000540608 TMEM119Q4V9L6 283 aa13.58□□□□□ -0.24
NPC1-202ENST00000540608 C8orf74Q6P047 294 aa13.58□□□□□ -0.24
NPC1-202ENST00000540608 EFCAB13Q8IY85 973 aa13.58□□□□□ -0.24
NPC1-202ENST00000540608 TSEN2Q8NCE0 465 aaKnown RBP13.58□□□□□ -0.24
NPC1-202ENST00000540608 NUDT12Q9BQG2 462 aa13.58□□□□□ -0.24
NPC1-202ENST00000540608 RBM12Q9NTZ6 932 aaKnown RBP13.58□□□□□ -0.24
NPC1-202ENST00000540608 CEP72Q9P209 647 aa13.58□□□□□ -0.24
NPC1-202ENST00000540608 TDP2O95551 362 aa13.58□□□□□ -0.24
NPC1-202ENST00000540608 FKBP3Q00688 224 aaKnown RBP13.58□□□□□ -0.24
NPC1-202ENST00000540608 SEPT2Q15019 361 aa13.58□□□□□ -0.24
NPC1-202ENST00000540608 LRRC41Q15345 812 aa13.58□□□□□ -0.24
NPC1-202ENST00000540608 IFT20Q8IY31 132 aa13.58□□□□□ -0.24
NPC1-202ENST00000540608 MYOCDQ8IZQ8 938 aa13.58□□□□□ -0.24
NPC1-202ENST00000540608 CNBD1Q8NA66 436 aa13.58□□□□□ -0.24
NPC1-202ENST00000540608 SNX29Q8TEQ0 813 aa13.58□□□□□ -0.24
NPC1-202ENST00000540608 TANGO6Q9C0B7 1094 aa13.58□□□□□ -0.24
NPC1-202ENST00000540608 COL4A3BPQ9Y5P4 624 aa13.58□□□□□ -0.24
NPC1-202ENST00000540608 GPR75-ASB3A0A0A6YYF3 556 aa13.57□□□□□ -0.24
NPC1-202ENST00000540608 POTEMA6NI47 508 aa13.57□□□□□ -0.24
NPC1-202ENST00000540608 A6NNZ2 444 aa13.57□□□□□ -0.24
NPC1-202ENST00000540608 EIF3HO15372 352 aaKnown RBP eCLIP13.57□□□□□ -0.249e-7■■□□□ 12.4
NPC1-202ENST00000540608 BUB1O43683 1085 aa13.57□□□□□ -0.24
NPC1-202ENST00000540608 SERPING1P05155 500 aa13.57□□□□□ -0.24
NPC1-202ENST00000540608 ADCY7P51828 1080 aa13.57□□□□□ -0.24
NPC1-202ENST00000540608 TUBB8Q3ZCM7 444 aa13.57□□□□□ -0.24
NPC1-202ENST00000540608 TTC31Q49AM3 519 aaPredicted RBP13.57□□□□□ -0.24
NPC1-202ENST00000540608 ZCWPW2Q504Y3 356 aa13.57□□□□□ -0.24
NPC1-202ENST00000540608 TRAPPC3LQ5T215 181 aa13.57□□□□□ -0.24
NPC1-202ENST00000540608 SFMBT2Q5VUG0 894 aa13.57□□□□□ -0.24
NPC1-202ENST00000540608 GDF3Q9NR23 364 aa13.57□□□□□ -0.24
NPC1-202ENST00000540608 DDX60LQ5H9U9 1706 aaKnown RBP13.57□□□□□ -0.24
NPC1-202ENST00000540608 CDK5RAP2Q96SN8 1893 aa13.57□□□□□ -0.24
NPC1-202ENST00000540608 TAF1LQ8IZX4 1826 aa13.57□□□□□ -0.24
NPC1-202ENST00000540608 ANKRD65E5RJM6 399 aa13.57□□□□□ -0.24
NPC1-202ENST00000540608 NOL4O94818 638 aa13.57□□□□□ -0.24
NPC1-202ENST00000540608 NAP1L1P55209 391 aaKnown RBP13.57□□□□□ -0.24
NPC1-202ENST00000540608 SKOR1P84550 965 aa13.57□□□□□ -0.24
NPC1-202ENST00000540608 KCNK18Q7Z418 384 aa13.57□□□□□ -0.24
NPC1-202ENST00000540608 GPIHBP1Q8IV16 184 aa13.57□□□□□ -0.24
NPC1-202ENST00000540608 GLIS3Q8NEA6 775 aa13.57□□□□□ -0.24
NPC1-202ENST00000540608 MS4A14Q96JA4 679 aa13.57□□□□□ -0.24
NPC1-202ENST00000540608 RUFY1Q96T51 708 aa13.57□□□□□ -0.24
NPC1-202ENST00000540608 CD209Q9NNX6 404 aa13.57□□□□□ -0.24
NPC1-202ENST00000540608 LUC7LQ9NQ29 371 aaKnown RBP13.57□□□□□ -0.24
NPC1-202ENST00000540608 A0A087WUV0 522 aaPredicted RBP13.56□□□□□ -0.24
NPC1-202ENST00000540608 TLR2O60603 784 aa13.56□□□□□ -0.24
NPC1-202ENST00000540608 CLSTN1O94985 981 aa13.56□□□□□ -0.24
NPC1-202ENST00000540608 NAB2Q15742 525 aa13.56□□□□□ -0.24
NPC1-202ENST00000540608 TDRD12Q587J7 1177 aaKnown RBP13.56□□□□□ -0.24
NPC1-202ENST00000540608 FAM83BQ5T0W9 1011 aa13.56□□□□□ -0.24
NPC1-202ENST00000540608 PACS2Q86VP3 889 aa13.56□□□□□ -0.24
NPC1-202ENST00000540608 TEX11Q8IYF3 940 aa13.56□□□□□ -0.24
NPC1-202ENST00000540608 DNAJC19Q96DA6 116 aa13.56□□□□□ -0.24
NPC1-202ENST00000540608 NLRC4Q9NPP4 1024 aa13.56□□□□□ -0.24
NPC1-202ENST00000540608 GRIN2DO15399 1336 aa13.56□□□□□ -0.24
NPC1-202ENST00000540608 NHSQ6T4R5 1651 aa13.56□□□□□ -0.24
NPC1-202ENST00000540608 TRAF5O00463 557 aa13.56□□□□□ -0.24
NPC1-202ENST00000540608 EBAG9O00559 213 aa13.56□□□□□ -0.24
NPC1-202ENST00000540608 UFL1O94874 794 aa13.56□□□□□ -0.24
NPC1-202ENST00000540608 CPP00450 1065 aa13.56□□□□□ -0.24
NPC1-202ENST00000540608 PDHBP11177 359 aa13.56□□□□□ -0.24
NPC1-202ENST00000540608 ERCC3P19447 782 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms