RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 SDSP20132 328 aa10.46□□□□□ -0.73
TRAPPC1-202ENST00000540486 DLX2Q07687 328 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC1-202ENST00000540486 CLUL1Q15846 466 aa10.46□□□□□ -0.73
TRAPPC1-202ENST00000540486 VARS2Q5ST30 1063 aaKnown RBP10.46□□□□□ -0.73
TRAPPC1-202ENST00000540486 FAM117BQ6P1L5 589 aa10.46□□□□□ -0.73
TRAPPC1-202ENST00000540486 CTR9Q6PD62 1173 aa10.46□□□□□ -0.73
TRAPPC1-202ENST00000540486 KIAA1211Q6ZU35 1233 aa10.46□□□□□ -0.73
TRAPPC1-202ENST00000540486 CENPQQ7L2Z9 268 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC1-202ENST00000540486 TMEM192Q8IY95 271 aa10.46□□□□□ -0.73
TRAPPC1-202ENST00000540486 FAM227BQ96M60 508 aa10.46□□□□□ -0.73
TRAPPC1-202ENST00000540486 SLC38A10Q9HBR0 1119 aa10.46□□□□□ -0.73
TRAPPC1-202ENST00000540486 RAVER2Q9HCJ3 691 aaKnown RBP10.46□□□□□ -0.73
TRAPPC1-202ENST00000540486 VTA1Q9NP79 307 aa10.46□□□□□ -0.73
TRAPPC1-202ENST00000540486 ATP8A2Q9NTI2 1148 aa10.46□□□□□ -0.73
TRAPPC1-202ENST00000540486 SIP14410 1827 aa10.46□□□□□ -0.74
TRAPPC1-202ENST00000540486 PARP14Q460N5 1801 aa10.46□□□□□ -0.74
TRAPPC1-202ENST00000540486 KMT2EQ8IZD2 1858 aa10.46□□□□□ -0.74
TRAPPC1-202ENST00000540486 MYH7P12883 1935 aa10.45□□□□□ -0.74
TRAPPC1-202ENST00000540486 FOXP2O15409 715 aa10.45□□□□□ -0.74
TRAPPC1-202ENST00000540486 FDX1P10109 184 aa10.45□□□□□ -0.74
TRAPPC1-202ENST00000540486 PTGS1P23219 599 aa10.45□□□□□ -0.74
TRAPPC1-202ENST00000540486 RBL2Q08999 1139 aa10.45□□□□□ -0.74
TRAPPC1-202ENST00000540486 PUM1Q14671 1186 aaKnown RBP eCLIP10.45□□□□□ -0.74
TRAPPC1-202ENST00000540486 PTGISQ16647 500 aa10.45□□□□□ -0.74
TRAPPC1-202ENST00000540486 TTC22Q5TAA0 569 aa10.45□□□□□ -0.74
TRAPPC1-202ENST00000540486 C12orf60Q5U649 245 aa10.45□□□□□ -0.74
TRAPPC1-202ENST00000540486 LRRC8DQ7L1W4 858 aa10.45□□□□□ -0.74
TRAPPC1-202ENST00000540486 TICAM2Q86XR7 235 aa10.45□□□□□ -0.74
TRAPPC1-202ENST00000540486 RMDN1Q96DB5 314 aa10.45□□□□□ -0.74
TRAPPC1-202ENST00000540486 CCDC136Q96JN2 1154 aa10.45□□□□□ -0.74
TRAPPC1-202ENST00000540486 RIPOR3Q96MK2 946 aa10.45□□□□□ -0.74
TRAPPC1-202ENST00000540486 LMAN2LQ9H0V9 348 aa10.45□□□□□ -0.74
TRAPPC1-202ENST00000540486 ACAD9Q9H845 621 aa10.45□□□□□ -0.74
TRAPPC1-202ENST00000540486 EPB41L4AQ9HCS5 686 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC1-202ENST00000540486 ACACBO00763 2458 aa10.45□□□□□ -0.74
TRAPPC1-202ENST00000540486 MCM3APO60318 1980 aa10.45□□□□□ -0.74
TRAPPC1-202ENST00000540486 A0A0D9SFI3 127 aa10.44□□□□□ -0.74
TRAPPC1-202ENST00000540486 NBNO60934 754 aa10.44□□□□□ -0.74
TRAPPC1-202ENST00000540486 AMHP03971 560 aa10.44□□□□□ -0.74
TRAPPC1-202ENST00000540486 RB1P06400 928 aa10.44□□□□□ -0.74
TRAPPC1-202ENST00000540486 NEFLP07196 543 aa10.44□□□□□ -0.74
TRAPPC1-202ENST00000540486 ICAM3P32942 547 aa10.44□□□□□ -0.74
TRAPPC1-202ENST00000540486 HYAL1Q12794 435 aa10.44□□□□□ -0.74
TRAPPC1-202ENST00000540486 NMIQ13287 307 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC1-202ENST00000540486 PPP4R3BQ5MIZ7 849 aa10.44□□□□□ -0.74
TRAPPC1-202ENST00000540486 TMEM63BQ5T3F8 832 aa10.44□□□□□ -0.74
TRAPPC1-202ENST00000540486 EEPD1Q7L9B9 569 aa10.44□□□□□ -0.74
TRAPPC1-202ENST00000540486 FBXO11Q86XK2 927 aa10.44□□□□□ -0.74
TRAPPC1-202ENST00000540486 IFNL3Q8IZI9 196 aa10.44□□□□□ -0.74
TRAPPC1-202ENST00000540486 DYNLL2Q96FJ2 89 aa10.44□□□□□ -0.74
TRAPPC1-202ENST00000540486 EPAS1Q99814 870 aa10.44□□□□□ -0.74
TRAPPC1-202ENST00000540486 HELLSQ9NRZ9 838 aa10.44□□□□□ -0.74
TRAPPC1-202ENST00000540486 PCDHGA10Q9Y5H3 936 aa10.44□□□□□ -0.74
TRAPPC1-202ENST00000540486 DNAH14Q0VDD8 3507 aa10.44□□□□□ -0.74
TRAPPC1-202ENST00000540486 PKD1L2Q7Z442 2459 aa10.44□□□□□ -0.74
TRAPPC1-202ENST00000540486 PTPRSQ13332 1948 aa10.43□□□□□ -0.74
TRAPPC1-202ENST00000540486 RAD50Q92878 1312 aa10.43□□□□□ -0.74
TRAPPC1-202ENST00000540486 TBX10O75333 385 aa10.43□□□□□ -0.74
TRAPPC1-202ENST00000540486 GNAT2P19087 354 aa10.43□□□□□ -0.74
TRAPPC1-202ENST00000540486 CDK8P49336 464 aa10.43□□□□□ -0.74
TRAPPC1-202ENST00000540486 ADAM15Q13444 863 aa10.43□□□□□ -0.74
TRAPPC1-202ENST00000540486 MCMDC2Q4G0Z9 681 aa10.43□□□□□ -0.74
TRAPPC1-202ENST00000540486 SBK1Q52WX2 424 aa10.43□□□□□ -0.74
TRAPPC1-202ENST00000540486 VPS53Q5VIR6 699 aa10.43□□□□□ -0.74
TRAPPC1-202ENST00000540486 GIMAP6Q6P9H5 292 aa10.43□□□□□ -0.74
TRAPPC1-202ENST00000540486 FRMD5Q7Z6J6 570 aa10.43□□□□□ -0.74
TRAPPC1-202ENST00000540486 ZNF589Q86UQ0 364 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC1-202ENST00000540486 FBXO16Q8IX29 292 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC1-202ENST00000540486 ZNF687Q8N1G0 1237 aa10.43□□□□□ -0.74
TRAPPC1-202ENST00000540486 ZNF454Q8N9F8 522 aa10.43□□□□□ -0.74
TRAPPC1-202ENST00000540486 MORC4Q8TE76 937 aa10.43□□□□□ -0.74
TRAPPC1-202ENST00000540486 MSLNLQ96KJ4 702 aa10.43□□□□□ -0.74
TRAPPC1-202ENST00000540486 WDR11Q9BZH6 1224 aa10.43□□□□□ -0.74
TRAPPC1-202ENST00000540486 A1CFQ9NQ94 594 aaKnown RBP10.43□□□□□ -0.74
TRAPPC1-202ENST00000540486 VPS13AQ96RL7 3174 aa10.43□□□□□ -0.74
TRAPPC1-202ENST00000540486 EP300Q09472 2414 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC1-202ENST00000540486 A6NJR5 290 aa10.42□□□□□ -0.74
TRAPPC1-202ENST00000540486 F5H6K3 240 aa10.42□□□□□ -0.74
TRAPPC1-202ENST00000540486 NKRFO15226 690 aaKnown RBP eCLIP10.42□□□□□ -0.74
TRAPPC1-202ENST00000540486 APPP05067 770 aa10.42□□□□□ -0.74
TRAPPC1-202ENST00000540486 CKBP12277 381 aa10.42□□□□□ -0.74
TRAPPC1-202ENST00000540486 KLRC3Q07444 240 aa10.42□□□□□ -0.74
TRAPPC1-202ENST00000540486 TCTN1Q2MV58 587 aa10.42□□□□□ -0.74
TRAPPC1-202ENST00000540486 TKFCQ3LXA3 575 aa10.42□□□□□ -0.74
TRAPPC1-202ENST00000540486 ERICH6BQ5W0A0 696 aa10.42□□□□□ -0.74
TRAPPC1-202ENST00000540486 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.42□□□□□ -0.74
TRAPPC1-202ENST00000540486 SESTD1Q86VW0 696 aa10.42□□□□□ -0.74
TRAPPC1-202ENST00000540486 MYOCDQ8IZQ8 938 aa10.42□□□□□ -0.74
TRAPPC1-202ENST00000540486 SMRP1Q8NCR6 262 aa10.42□□□□□ -0.74
TRAPPC1-202ENST00000540486 OR6J1Q8NGC5 347 aa10.42□□□□□ -0.74
TRAPPC1-202ENST00000540486 DDX12PQ92771 950 aa10.42□□□□□ -0.74
TRAPPC1-202ENST00000540486 KIFC2Q96AC6 838 aa10.42□□□□□ -0.74
TRAPPC1-202ENST00000540486 NUP88Q99567 741 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC1-202ENST00000540486 PHF7Q9BWX1 381 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC1-202ENST00000540486 IL25Q9H293 177 aa10.42□□□□□ -0.74
TRAPPC1-202ENST00000540486 HOMER2Q9NSB8 354 aa10.42□□□□□ -0.74
TRAPPC1-202ENST00000540486 FEM1BQ9UK73 627 aa10.42□□□□□ -0.74
TRAPPC1-202ENST00000540486 MYO7AQ13402 2215 aa10.42□□□□□ -0.74
TRAPPC1-202ENST00000540486 TANC1Q9C0D5 1861 aa10.42□□□□□ -0.74
TRAPPC1-202ENST00000540486 ATRXP46100 2492 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms