RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 B3GNT9Q6UX72 402 aa9.28□□□□□ -0.92
C2CD3-215ENST00000540452 LBX2Q6XYB7 198 aa9.28□□□□□ -0.92
C2CD3-215ENST00000540452 CDAN1Q8IWY9 1227 aa9.28□□□□□ -0.92
C2CD3-215ENST00000540452 CCDC65Q8IXS2 484 aa9.28□□□□□ -0.92
C2CD3-215ENST00000540452 RDM1Q8NG50 284 aa9.28□□□□□ -0.92
C2CD3-215ENST00000540452 TRPM4Q8TD43 1214 aa9.28□□□□□ -0.92
C2CD3-215ENST00000540452 SLC5A5Q92911 643 aa9.28□□□□□ -0.92
C2CD3-215ENST00000540452 DCPSQ96C86 337 aaKnown RBP9.28□□□□□ -0.92
C2CD3-215ENST00000540452 CCDC51Q96ER9 411 aa9.28□□□□□ -0.92
C2CD3-215ENST00000540452 PNMA5Q96PV4 448 aa9.28□□□□□ -0.92
C2CD3-215ENST00000540452 NAA15Q9BXJ9 866 aaKnown RBP9.28□□□□□ -0.92
C2CD3-215ENST00000540452 EMILIN3Q9NT22 766 aa9.28□□□□□ -0.92
C2CD3-215ENST00000540452 HOXC10Q9NYD6 342 aa9.28□□□□□ -0.92
C2CD3-215ENST00000540452 SEL1LQ9UBV2 794 aa9.28□□□□□ -0.92
C2CD3-215ENST00000540452 ADD3Q9UEY8 706 aaKnown RBP9.28□□□□□ -0.92
C2CD3-215ENST00000540452 CTDP1Q9Y5B0 961 aaPredicted RBP9.28□□□□□ -0.92
C2CD3-215ENST00000540452 COL11A1P12107 1806 aaPredicted RBP9.28□□□□□ -0.92
C2CD3-215ENST00000540452 POLR2AP24928 1970 aaKnown RBP9.28□□□□□ -0.92
C2CD3-215ENST00000540452 SMCHD1A6NHR9 2005 aa9.27□□□□□ -0.92
C2CD3-215ENST00000540452 A0A1W2PQC6 194 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 POTEMA6NI47 508 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 PP2D1A8MPX8 630 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 FAM86B1E9PN63 330 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 VWA5AO00534 786 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 MSH4O15457 936 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 PPP1R12BO60237 982 aaPredicted RBP9.27□□□□□ -0.93
C2CD3-215ENST00000540452 ABCB7O75027 752 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 FLOT1O75955 427 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 CFBP00751 764 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 TPM2P07951 284 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 FAM86B2P0C5J1 330 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 ATP1A3P13637 1013 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 CD44P16070 742 aaKnown RBP9.27□□□□□ -0.93
C2CD3-215ENST00000540452 CDC25AP30304 524 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 INPP5BP32019 993 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 NF2P35240 595 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 ZNF76P36508 570 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 CCT6AP40227 531 aaKnown RBP9.27□□□□□ -0.93
C2CD3-215ENST00000540452 PBX1P40424 430 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 ASIC1P78348 528 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 PDE4DQ08499 809 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 TBX2Q13207 712 aaPredicted RBP9.27□□□□□ -0.93
C2CD3-215ENST00000540452 MTMR2Q13614 643 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 COG2Q14746 738 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 PRR16Q569H4 304 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 TTI2Q6NXR4 508 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 APTXQ7Z2E3 356 aaKnown RBP9.27□□□□□ -0.93
C2CD3-215ENST00000540452 SULF1Q8IWU6 871 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 SYT2Q8N9I0 419 aaPredicted RBP9.27□□□□□ -0.93
C2CD3-215ENST00000540452 RETREG2Q8NC44 543 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 PROCA1Q8NCQ7 364 aaPredicted RBP9.27□□□□□ -0.93
C2CD3-215ENST00000540452 ZNF526Q8TF50 670 aaPredicted RBP9.27□□□□□ -0.93
C2CD3-215ENST00000540452 NELFBQ8WX92 580 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 CLEC4DQ8WXI8 215 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 P2RX5Q93086 422 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 CDHR1Q96JP9 859 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 MED15Q96RN5 788 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 TANGO6Q9C0B7 1094 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 KCNF1Q9H3M0 494 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 RPAP3Q9H6T3 665 aaPredicted RBP9.27□□□□□ -0.93
C2CD3-215ENST00000540452 TBC1D22BQ9NU19 505 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 TMOD4Q9NZQ9 345 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 VAV3Q9UKW4 847 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 DNM3Q9UQ16 869 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 AFG3L2Q9Y4W6 797 aa9.27□□□□□ -0.93
C2CD3-215ENST00000540452 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.27□□□□□ -0.93
C2CD3-215ENST00000540452 A0A087WWV3 80 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 LOC102724159A0A0B4J2E5 919 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 IQCA1LA6NCM1 817 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 MYMKA6NI61 221 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 CXCL11O14625 94 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 STX10O60499 249 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 LYPLA2O95372 231 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 EYA4O95677 639 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 TPM1P09493 284 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 GAP43P17677 238 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 PTGS1P23219 599 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 IREB2P48200 963 aaKnown RBP9.26□□□□□ -0.93
C2CD3-215ENST00000540452 HIRAP54198 1017 aaPredicted RBP9.26□□□□□ -0.93
C2CD3-215ENST00000540452 SLC12A3P55017 1021 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 MAP3K9P80192 1104 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 PPATQ06203 517 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 SPP2Q13103 211 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 NOLC1Q14978 699 aaKnown RBP eCLIP9.26□□□□□ -0.93
C2CD3-215ENST00000540452 PWP2Q15269 919 aaKnown RBP9.26□□□□□ -0.93
C2CD3-215ENST00000540452 EPHA7Q15375 998 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 TCP11X2Q5H9J9 407 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 ISM2Q6H9L7 571 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 CATSPERGQ6ZRH7 1159 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 OTOP1Q7RTM1 612 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 CNGA4Q8IV77 575 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 SPC24Q8NBT2 197 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 REPS2Q8NFH8 660 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 LRRC15Q8TF66 581 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 DDX12PQ92771 950 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 DNAJC19Q96DA6 116 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 PANX2Q96RD6 677 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 P2RX7Q99572 595 aaKnown RBP9.26□□□□□ -0.93
C2CD3-215ENST00000540452 HSD17B14Q9BPX1 270 aa9.26□□□□□ -0.93
C2CD3-215ENST00000540452 MXRA8Q9BRK3 442 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms