RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 ANKRD2Q9GZV1 360 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 JADE2Q9NQC1 790 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 SLC12A6Q9UHW9 1150 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 GSTA1P08263 222 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 CYP21A2P08686 494 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 FAM153BP0C7A2 387 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 KLRK1P26718 216 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 TNFRSF8P28908 595 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 MATR3P43243 847 aaKnown RBP eCLIP10.42□□□□□ -0.742e-8■■■■□ 23.4
CTNNA1-243ENST00000540387 PAK2Q13177 524 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 ADAM9Q13443 819 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 FAM153CQ494X1 144 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 RESP18Q5W5W9 173 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 ANO7Q6IWH7 933 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 MAEAQ7L5Y9 396 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 CREG2Q8IUH2 290 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 APLFQ8IW19 511 aaPredicted RBP10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 ARHGEF10LQ9HCE6 1279 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 FAM153AQ9UHL3 310 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 ITIH6Q6UXX5 1313 aa10.42□□□□□ -0.74
CTNNA1-243ENST00000540387 TMOD1P28289 359 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 POLD1P28340 1107 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 HERVK_113P62684 666 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 GPSM2P81274 684 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 TMEM62Q0P6H9 643 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 SFSWAPQ12872 951 aaKnown RBP10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 MORC3Q14149 939 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 HAUS3Q68CZ6 603 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 PI16Q6UXB8 463 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 STOX1Q6ZVD7 989 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 SPATA4Q8NEY3 305 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 RAPGEF5Q92565 580 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 PHACTR1Q9C0D0 580 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 ZNF804BA4D1E1 1349 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 A0A0G2JLW4 131 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 ANO9A1A5B4 782 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 PHF20L1A8MW92 1017 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 PPEF1O14829 653 aaPredicted RBP10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 IDEP14735 1019 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 PDIA3P30101 505 aaKnown RBP10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 GYG1P46976 350 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 PLCD1P51178 756 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 CCNG1P51959 295 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 VAV2P52735 878 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 POLE2P56282 527 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 FKBP4Q02790 459 aaKnown RBP eCLIP10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 DYNC1I2Q13409 638 aaKnown RBP10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 TRIM68Q6AZZ1 485 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 DHX32Q7L7V1 743 aaKnown RBP10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 CPLX4Q7Z7G2 160 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 TXNRD3Q86VQ6 643 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 NOC3LQ8WTT2 800 aaKnown RBP10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 PRCCQ92733 491 aaPredicted RBP10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 GPR101Q96P66 508 aaPredicted RBP10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 NUP88Q99567 741 aaPredicted RBP10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 HAUS7Q99871 368 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 SYT15Q9BQS2 421 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 LZTS2Q9BRK4 669 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 TSPYL2Q9H2G4 693 aaPredicted RBP10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 TAF1DQ9H5J8 278 aaPredicted RBP10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 GJB4Q9NTQ9 266 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 KCNH3Q9ULD8 1083 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 CEP131Q9UPN4 1083 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 PHF24Q9UPV7 400 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 LAMA4Q16363 1823 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 ANKRD31Q8N7Z5 1873 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 F8W031 263 aaPredicted RBP10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 VIMP08670 466 aaKnown RBP10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 DRD4P21917 467 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 MCAMP43121 646 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 ITIH3Q06033 890 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 CDC37Q16543 378 aaPredicted RBP10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 TSHZ1Q6ZSZ6 1077 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 SP8Q8IXZ3 490 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 MIPOL1Q8TD10 442 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 MAIP1Q8WWC4 291 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 SGIP1Q9BQI5 828 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 ZWILCHQ9H900 591 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 TMBIM4Q9HC24 238 aa10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 ZNF219Q9P2Y4 722 aaPredicted RBP10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 PPP1R1BQ9UD71 204 aaPredicted RBP10.41□□□□□ -0.74
CTNNA1-243ENST00000540387 ABLIM1O14639 778 aa10.4□□□□□ -0.74
CTNNA1-243ENST00000540387 PPP6R2O75170 966 aa10.4□□□□□ -0.74
CTNNA1-243ENST00000540387 ATP2A2P16615 1042 aaKnown RBP10.4□□□□□ -0.74
CTNNA1-243ENST00000540387 KRT9P35527 623 aa10.4□□□□□ -0.74
CTNNA1-243ENST00000540387 ALDH5A1P51649 535 aaPredicted RBP10.4□□□□□ -0.74
CTNNA1-243ENST00000540387 MRPS35P82673 323 aaKnown RBP10.4□□□□□ -0.74
CTNNA1-243ENST00000540387 POSTNQ15063 836 aa10.4□□□□□ -0.74
CTNNA1-243ENST00000540387 STYK1Q6J9G0 422 aa10.4□□□□□ -0.74
CTNNA1-243ENST00000540387 ZNF572Q7Z3I7 529 aaPredicted RBP10.4□□□□□ -0.74
CTNNA1-243ENST00000540387 MREGQ8N565 214 aa10.4□□□□□ -0.74
CTNNA1-243ENST00000540387 FAM84BQ96KN1 310 aaPredicted RBP10.4□□□□□ -0.74
CTNNA1-243ENST00000540387 CTAGE1Q96RT6 745 aa10.4□□□□□ -0.74
CTNNA1-243ENST00000540387 IQCGQ9H095 443 aaKnown RBP10.4□□□□□ -0.74
CTNNA1-243ENST00000540387 OCEL1Q9H607 264 aa10.4□□□□□ -0.74
CTNNA1-243ENST00000540387 AATFQ9NY61 560 aaKnown RBP eCLIP10.4□□□□□ -0.74
CTNNA1-243ENST00000540387 NFU1Q9UMS0 254 aa10.4□□□□□ -0.74
CTNNA1-243ENST00000540387 IQSEC3Q9UPP2 1182 aaPredicted RBP10.4□□□□□ -0.74
CTNNA1-243ENST00000540387 ATP6V0A2Q9Y487 856 aa10.4□□□□□ -0.74
CTNNA1-243ENST00000540387 XDHP47989 1333 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms