RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 BTBD19C9JJ37 291 aa5.1□□□□□ -1.59
C2CD3-214ENST00000540057 IRS4O14654 1257 aaPredicted RBP5.1□□□□□ -1.59
C2CD3-214ENST00000540057 MGAMO43451 1857 aa5.1□□□□□ -1.59
C2CD3-214ENST00000540057 COL2A1P02458 1487 aaPredicted RBP5.1□□□□□ -1.59
C2CD3-214ENST00000540057 TFRCP02786 760 aaKnown RBP5.1□□□□□ -1.59
C2CD3-214ENST00000540057 NEFMP07197 916 aa5.1□□□□□ -1.59
C2CD3-214ENST00000540057 EIF2S2P20042 333 aaKnown RBP5.1□□□□□ -1.59
C2CD3-214ENST00000540057 HOXD10P28358 340 aa5.1□□□□□ -1.59
C2CD3-214ENST00000540057 XDHP47989 1333 aa5.1□□□□□ -1.59
C2CD3-214ENST00000540057 FCGRTP55899 365 aa5.1□□□□□ -1.59
C2CD3-214ENST00000540057 MUC3AQ02505 3323 aa5.1□□□□□ -1.59
C2CD3-214ENST00000540057 CDK5R2Q13319 367 aa5.1□□□□□ -1.59
C2CD3-214ENST00000540057 CC2D1BQ5T0F9 858 aaKnown RBP5.1□□□□□ -1.59
C2CD3-214ENST00000540057 ZNF574Q6ZN55 896 aaPredicted RBP5.1□□□□□ -1.59
C2CD3-214ENST00000540057 MYPNQ86TC9 1320 aa5.1□□□□□ -1.59
C2CD3-214ENST00000540057 MAFAQ8NHW3 353 aaPredicted RBP5.1□□□□□ -1.59
C2CD3-214ENST00000540057 DIS3LQ8TF46 1054 aaKnown RBP5.1□□□□□ -1.59
C2CD3-214ENST00000540057 XAGE3Q8WTP9 111 aa5.1□□□□□ -1.59
C2CD3-214ENST00000540057 BCL7CQ8WUZ0 217 aaPredicted RBP5.1□□□□□ -1.59
C2CD3-214ENST00000540057 ISCA1Q9BUE6 129 aa5.1□□□□□ -1.59
C2CD3-214ENST00000540057 BCO2Q9BYV7 579 aa5.1□□□□□ -1.59
C2CD3-214ENST00000540057 ATXN3LQ9H3M9 355 aa5.1□□□□□ -1.59
C2CD3-214ENST00000540057 ZCCHC17Q9NP64 241 aaKnown RBP5.1□□□□□ -1.59
C2CD3-214ENST00000540057 GPN3Q9UHW5 284 aaPredicted RBP5.1□□□□□ -1.59
C2CD3-214ENST00000540057 CPA4Q9UI42 421 aa5.1□□□□□ -1.59
C2CD3-214ENST00000540057 DCTN4Q9UJW0 460 aa5.1□□□□□ -1.59
C2CD3-214ENST00000540057 MED23Q9ULK4 1368 aa5.1□□□□□ -1.59
C2CD3-214ENST00000540057 LAMA2P24043 3122 aaKnown RBP5.09□□□□□ -1.59
C2CD3-214ENST00000540057 AOX1Q06278 1338 aa5.09□□□□□ -1.59
C2CD3-214ENST00000540057 CLRN2A0PK11 232 aa5.09□□□□□ -1.59
C2CD3-214ENST00000540057 TREHO43280 583 aa5.09□□□□□ -1.59
C2CD3-214ENST00000540057 WDHD1O75717 1129 aaPredicted RBP5.09□□□□□ -1.59
C2CD3-214ENST00000540057 HSPA5P11021 654 aaKnown RBP5.09□□□□□ -1.59
C2CD3-214ENST00000540057 CAPN2P17655 700 aa5.09□□□□□ -1.59
C2CD3-214ENST00000540057 PRKCZQ05513 592 aa5.09□□□□□ -1.59
C2CD3-214ENST00000540057 MAP3K12Q12852 859 aa5.09□□□□□ -1.59
C2CD3-214ENST00000540057 VGLL4Q14135 290 aa5.09□□□□□ -1.59
C2CD3-214ENST00000540057 RASA3Q14644 834 aa5.09□□□□□ -1.59
C2CD3-214ENST00000540057 DLGAP5Q15398 846 aa5.09□□□□□ -1.59
C2CD3-214ENST00000540057 ENOX2Q16206 610 aaKnown RBP5.09□□□□□ -1.59
C2CD3-214ENST00000540057 TTLL5Q6EMB2 1281 aa5.09□□□□□ -1.59
C2CD3-214ENST00000540057 DTHD1Q6ZMT9 781 aa5.09□□□□□ -1.59
C2CD3-214ENST00000540057 NECAB2Q7Z6G3 386 aa5.09□□□□□ -1.59
C2CD3-214ENST00000540057 TP53INP2Q8IXH6 220 aa5.09□□□□□ -1.59
C2CD3-214ENST00000540057 C3orf58Q8NDZ4 430 aa5.09□□□□□ -1.59
C2CD3-214ENST00000540057 DEFB118Q96PH6 123 aa5.09□□□□□ -1.59
C2CD3-214ENST00000540057 CDX2Q99626 313 aaPredicted RBP5.09□□□□□ -1.59
C2CD3-214ENST00000540057 COA1Q9GZY4 146 aa5.09□□□□□ -1.59
C2CD3-214ENST00000540057 TMEM39AQ9NV64 488 aa5.09□□□□□ -1.59
C2CD3-214ENST00000540057 CACNA2D2Q9NY47 1150 aa5.09□□□□□ -1.59
C2CD3-214ENST00000540057 GABRQQ9UN88 632 aa5.09□□□□□ -1.59
C2CD3-214ENST00000540057 FAM205AQ6ZU69 1335 aa5.08□□□□□ -1.6
C2CD3-214ENST00000540057 ADGRA2Q96PE1 1338 aa5.08□□□□□ -1.6
C2CD3-214ENST00000540057 PNMA6FA0A0J9YX94 578 aa5.08□□□□□ -1.6
C2CD3-214ENST00000540057 FAM87AP0C7U9 286 aa5.08□□□□□ -1.6
C2CD3-214ENST00000540057 U2AF1L5P0DN76 240 aaPredicted RBP5.08□□□□□ -1.6
C2CD3-214ENST00000540057 CETPP11597 493 aa5.08□□□□□ -1.6
C2CD3-214ENST00000540057 XRCC5P13010 732 aaKnown RBP5.08□□□□□ -1.6
C2CD3-214ENST00000540057 U2AF1Q01081 240 aaKnown RBP eCLIP5.08□□□□□ -1.6
C2CD3-214ENST00000540057 ZNF252P-AS1Q0IIN9 211 aa5.08□□□□□ -1.6
C2CD3-214ENST00000540057 TTLL4Q14679 1199 aa5.08□□□□□ -1.6
C2CD3-214ENST00000540057 NXPE4Q6UWF7 544 aa5.08□□□□□ -1.6
C2CD3-214ENST00000540057 SPRED2Q7Z698 418 aa5.08□□□□□ -1.6
C2CD3-214ENST00000540057 SULF2Q8IWU5 870 aa5.08□□□□□ -1.6
C2CD3-214ENST00000540057 SMYD4Q8IYR2 804 aaPredicted RBP5.08□□□□□ -1.6
C2CD3-214ENST00000540057 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.08□□□□□ -1.6
C2CD3-214ENST00000540057 MYLIPQ8WY64 445 aa5.08□□□□□ -1.6
C2CD3-214ENST00000540057 PRMT6Q96LA8 375 aaPredicted RBP5.08□□□□□ -1.6
C2CD3-214ENST00000540057 PIDD1Q9HB75 910 aa5.08□□□□□ -1.6
C2CD3-214ENST00000540057 VEZTQ9HBM0 779 aa5.08□□□□□ -1.6
C2CD3-214ENST00000540057 SPEF2Q9C093 1822 aa5.07□□□□□ -1.6
C2CD3-214ENST00000540057 DDX60LQ5H9U9 1706 aaKnown RBP5.07□□□□□ -1.6
C2CD3-214ENST00000540057 MYO1BO43795 1136 aa5.07□□□□□ -1.6
C2CD3-214ENST00000540057 ADCY3O60266 1144 aa5.07□□□□□ -1.6
C2CD3-214ENST00000540057 LEFTY1O75610 366 aa5.07□□□□□ -1.6
C2CD3-214ENST00000540057 SLFN14P0C7P3 912 aa5.07□□□□□ -1.6
C2CD3-214ENST00000540057 KLRK1P26718 216 aa5.07□□□□□ -1.6
C2CD3-214ENST00000540057 NTF4P34130 210 aa5.07□□□□□ -1.6
C2CD3-214ENST00000540057 CCT4P50991 539 aaKnown RBP5.07□□□□□ -1.6
C2CD3-214ENST00000540057 CFAP100Q494V2 611 aa5.07□□□□□ -1.6
C2CD3-214ENST00000540057 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.07□□□□□ -1.6
C2CD3-214ENST00000540057 ZC3H12AQ5D1E8 599 aaKnown RBP5.07□□□□□ -1.6
C2CD3-214ENST00000540057 ANKRD18AQ8IVF6 992 aa5.07□□□□□ -1.6
C2CD3-214ENST00000540057 PLD6Q8N2A8 252 aaKnown RBP5.07□□□□□ -1.6
C2CD3-214ENST00000540057 CERS5Q8N5B7 392 aa5.07□□□□□ -1.6
C2CD3-214ENST00000540057 FAM181AQ8N9Y4 354 aa5.07□□□□□ -1.6
C2CD3-214ENST00000540057 ZBTB38Q8NAP3 1195 aaPredicted RBP5.07□□□□□ -1.6
C2CD3-214ENST00000540057 AGBL5Q8NDL9 886 aa5.07□□□□□ -1.6
C2CD3-214ENST00000540057 PLBD2Q8NHP8 589 aa5.07□□□□□ -1.6
C2CD3-214ENST00000540057 ISL2Q96A47 359 aa5.07□□□□□ -1.6
C2CD3-214ENST00000540057 SNX27Q96L92 541 aa5.07□□□□□ -1.6
C2CD3-214ENST00000540057 TEPSINQ96N21 525 aa5.07□□□□□ -1.6
C2CD3-214ENST00000540057 MINPP1Q9UNW1 487 aa5.07□□□□□ -1.6
C2CD3-214ENST00000540057 CSADQ9Y600 493 aa5.07□□□□□ -1.6
C2CD3-214ENST00000540057 SNCAIPQ9Y6H5 919 aa5.07□□□□□ -1.6
C2CD3-214ENST00000540057 DOCK3Q8IZD9 2030 aa5.07□□□□□ -1.6
C2CD3-214ENST00000540057 ARAP2Q8WZ64 1704 aa5.06□□□□□ -1.6
C2CD3-214ENST00000540057 KRTAP4-8A0A0G2JLE6 195 aa5.06□□□□□ -1.6
C2CD3-214ENST00000540057 F8W031 263 aaPredicted RBP5.06□□□□□ -1.6
C2CD3-214ENST00000540057 PAPLNO95428 1278 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms