RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 MORC3Q14149 939 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 SWI5Q1ZZU3 235 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 HSP90B2PQ58FF3 399 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 EPHA10Q5JZY3 1008 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 ICE2Q659A1 982 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 APOBEC3HQ6NTF7 200 aaKnown RBP8.59□□□□□ -1.03
CCDC60-204ENST00000539847 TMTC1Q8IUR5 882 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 MB21D2Q8IYB1 491 aaPredicted RBP8.59□□□□□ -1.03
CCDC60-204ENST00000539847 PHTF2Q8N3S3 785 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 ARMC2Q8NEN0 867 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 NCOA7Q8NI08 942 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 WASF1Q92558 559 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 WDR24Q96S15 920 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 WRNIP1Q96S55 665 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 MAP3K14Q99558 947 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 HTATIP2Q9BUP3 242 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 ZNF341Q9BYN7 854 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 KRTAP3-3Q9BYR6 98 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 KRTAP3-2Q9BYR7 98 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 RSPH14Q9UHP6 348 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 ZNF112Q9UJU3 913 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 GPSM3Q9Y4H4 160 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 A0A1B0GUL6 1792 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 ADGRA2Q96PE1 1338 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 ARAP2Q8WZ64 1704 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 A0A087WUV0 522 aaPredicted RBP8.58□□□□□ -1.04
CCDC60-204ENST00000539847 TARSL2A2RTX5 802 aaKnown RBP8.58□□□□□ -1.04
CCDC60-204ENST00000539847 CTAGE9A4FU28 777 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 CXCL11O14625 94 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 DTNBO60941 627 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 PPFIA4O75335 1185 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 GUCY2CP25092 1073 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 PBX1P40424 430 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 GJA8P48165 433 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 LMAN1P49257 510 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 RCAN1P53805 252 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 IRX3P78415 501 aaPredicted RBP8.58□□□□□ -1.04
CCDC60-204ENST00000539847 GNL2Q13823 731 aaKnown RBP8.58□□□□□ -1.04
CCDC60-204ENST00000539847 TRIM14Q14142 442 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 MAP9Q49MG5 647 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 NOL9Q5SY16 702 aaKnown RBP8.58□□□□□ -1.04
CCDC60-204ENST00000539847 SHC4Q6S5L8 630 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 CDAN1Q8IWY9 1227 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 EFCAB13Q8IY85 973 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 VGLL2Q8N8G2 317 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 CNNM3Q8NE01 707 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 C1orf216Q8TAB5 229 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 ADAM32Q8TC27 787 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 GIPC2Q8TF65 315 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 ZNF516Q92618 1163 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 DHX58Q96C10 678 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 ZNF594Q96JF6 807 aaPredicted RBP8.58□□□□□ -1.04
CCDC60-204ENST00000539847 TMEM87BQ96K49 555 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 PARK7Q99497 189 aaKnown RBP8.58□□□□□ -1.04
CCDC60-204ENST00000539847 MTRQ99707 1265 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 DBNDD2Q9BQY9 259 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 SIL1Q9H173 461 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 PRO3102Q9H379 93 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 ANKZF1Q9H8Y5 726 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 INTS13Q9NVM9 706 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 RAI14Q9P0K7 980 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 BIN2Q9UBW5 565 aaPredicted RBP8.58□□□□□ -1.04
CCDC60-204ENST00000539847 KCNH3Q9ULD8 1083 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 JAG2Q9Y219 1238 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 SLC45A1Q9Y2W3 748 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 PCDHA5Q9Y5H7 936 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 NR2E3Q9Y5X4 410 aa8.58□□□□□ -1.04
CCDC60-204ENST00000539847 ZMYM6O95789 1325 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 CTAGE15A4D2H0 777 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 POTEMA6NI47 508 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 H3BQF6 201 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 BIN1O00499 593 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 PRC1O43663 620 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 PDE8BO95263 885 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 ADH1BP00325 375 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 POLR3DP05423 398 aaPredicted RBP8.57□□□□□ -1.04
CCDC60-204ENST00000539847 CTAGE8P0CG41 777 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 GRK4P32298 578 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 PSMC4P43686 418 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 PLCD1P51178 756 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 MCCD1P59942 119 aaPredicted RBP8.57□□□□□ -1.04
CCDC60-204ENST00000539847 UBXN2AP68543 259 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 ALX1Q15699 326 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 TTC31Q49AM3 519 aaPredicted RBP8.57□□□□□ -1.04
CCDC60-204ENST00000539847 FILIP1LQ4L180 1135 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 SPATA1Q5VX52 437 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 CCDC129Q6ZRS4 1044 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 CTAGE6Q86UF2 777 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 METTL16Q86W50 562 aaKnown RBP8.57□□□□□ -1.04
CCDC60-204ENST00000539847 PPFIBP1Q86W92 1011 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 RNF135Q8IUD6 432 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 CNGA4Q8IV77 575 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 FOXP4Q8IVH2 680 aaPredicted RBP8.57□□□□□ -1.04
CCDC60-204ENST00000539847 CTAGE4Q8IX94 777 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 PLPP7Q8NBV4 271 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 WDR66Q8TBY9 1149 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 RAET1EQ8TD07 263 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 SH3TC2Q8TF17 1288 aa8.57□□□□□ -1.04
CCDC60-204ENST00000539847 CCDC12Q8WUD4 166 aaPredicted RBP8.57□□□□□ -1.04
CCDC60-204ENST00000539847 FAM151AQ8WW52 585 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms