RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 SLC26A4O43511 780 aa25.1■■□□□ 1.61
HOMER3-204ENST00000539827 DSG3P32926 999 aa25.1■■□□□ 1.61
HOMER3-204ENST00000539827 STIM1Q13586 685 aa25.1■■□□□ 1.61
HOMER3-204ENST00000539827 CEP55Q53EZ4 464 aa25.1■■□□□ 1.61
HOMER3-204ENST00000539827 HAUS3Q68CZ6 603 aa25.1■■□□□ 1.61
HOMER3-204ENST00000539827 UNC13DQ70J99 1090 aa25.1■■□□□ 1.61
HOMER3-204ENST00000539827 CATSPER3Q86XQ3 398 aa25.1■■□□□ 1.61
HOMER3-204ENST00000539827 DDX12PQ92771 950 aa25.1■■□□□ 1.61
HOMER3-204ENST00000539827 TRERF1Q96PN7 1200 aa25.1■■□□□ 1.61
HOMER3-204ENST00000539827 LRRC27Q9C0I9 530 aa25.1■■□□□ 1.61
HOMER3-204ENST00000539827 POTEFA5A3E0 1075 aa25.09■■□□□ 1.61
HOMER3-204ENST00000539827 POTEIP0CG38 1075 aa25.09■■□□□ 1.61
HOMER3-204ENST00000539827 ARP10275 920 aa25.09■■□□□ 1.61
HOMER3-204ENST00000539827 POTEGQ6S5H5 508 aa25.09■■□□□ 1.61
HOMER3-204ENST00000539827 POTEEQ6S8J3 1075 aa25.09■■□□□ 1.61
HOMER3-204ENST00000539827 KRT26Q7Z3Y9 468 aa25.09■■□□□ 1.61
HOMER3-204ENST00000539827 VSTM4Q8IW00 320 aa25.09■■□□□ 1.61
HOMER3-204ENST00000539827 SYTL5Q8TDW5 730 aaPredicted RBP25.09■■□□□ 1.61
HOMER3-204ENST00000539827 EML1O00423 815 aa25.09■■□□□ 1.61
HOMER3-204ENST00000539827 PLA2G4BP0C869 781 aa25.09■■□□□ 1.61
HOMER3-204ENST00000539827 FDX1P10109 184 aa25.09■■□□□ 1.61
HOMER3-204ENST00000539827 IDEP14735 1019 aa25.09■■□□□ 1.61
HOMER3-204ENST00000539827 PMS1P54277 932 aaKnown RBP25.09■■□□□ 1.61
HOMER3-204ENST00000539827 KIAA1524Q8TCG1 905 aa25.09■■□□□ 1.61
HOMER3-204ENST00000539827 SLC39A2Q9NP94 309 aa25.09■■□□□ 1.61
HOMER3-204ENST00000539827 RPTORQ8N122 1335 aa25.08■■□□□ 1.61
HOMER3-204ENST00000539827 PVALEFA0A1B0GWK0 134 aa25.08■■□□□ 1.61
HOMER3-204ENST00000539827 MEIS1O00470 390 aa25.08■■□□□ 1.61
HOMER3-204ENST00000539827 SPATA31C1P0DKV0 1188 aa25.08■■□□□ 1.61
HOMER3-204ENST00000539827 GSDMDP57764 484 aa25.08■■□□□ 1.61
HOMER3-204ENST00000539827 LRCH2Q5VUJ6 765 aa25.08■■□□□ 1.61
HOMER3-204ENST00000539827 CNNM4Q6P4Q7 775 aa25.08■■□□□ 1.61
HOMER3-204ENST00000539827 CATSPERGQ6ZRH7 1159 aa25.08■■□□□ 1.61
HOMER3-204ENST00000539827 IL31RAQ8NI17 732 aa25.08■■□□□ 1.61
HOMER3-204ENST00000539827 CNKSR2Q8WXI2 1034 aa25.08■■□□□ 1.61
HOMER3-204ENST00000539827 SLC5A5Q92911 643 aa25.08■■□□□ 1.61
HOMER3-204ENST00000539827 TAAR1Q96RJ0 339 aa25.08■■□□□ 1.61
HOMER3-204ENST00000539827 RIPK3Q9Y572 518 aa25.08■■□□□ 1.61
HOMER3-204ENST00000539827 RLFQ13129 1914 aa25.08■■□□□ 1.61
HOMER3-204ENST00000539827 PSMA7O14818 248 aa25.07■■□□□ 1.6
HOMER3-204ENST00000539827 GHRHRQ02643 423 aa25.07■■□□□ 1.6
HOMER3-204ENST00000539827 COG2Q14746 738 aa25.07■■□□□ 1.6
HOMER3-204ENST00000539827 APTXQ7Z2E3 356 aaKnown RBP25.07■■□□□ 1.6
HOMER3-204ENST00000539827 REPS2Q8NFH8 660 aa25.07■■□□□ 1.6
HOMER3-204ENST00000539827 MXRA8Q9BRK3 442 aa25.07■■□□□ 1.6
HOMER3-204ENST00000539827 PSMD10O75832 226 aa25.07■■□□□ 1.6
HOMER3-204ENST00000539827 RPA1P27694 616 aa25.07■■□□□ 1.6
HOMER3-204ENST00000539827 RPS6P62753 249 aaKnown RBP25.07■■□□□ 1.6
HOMER3-204ENST00000539827 NSMFQ6X4W1 530 aa25.07■■□□□ 1.6
HOMER3-204ENST00000539827 KIAA0895Q8NCT3 520 aa25.07■■□□□ 1.6
HOMER3-204ENST00000539827 DHTKD1Q96HY7 919 aaPredicted RBP25.07■■□□□ 1.6
HOMER3-204ENST00000539827 RNF146Q9NTX7 359 aa25.07■■□□□ 1.6
HOMER3-204ENST00000539827 COL11A1P12107 1806 aaPredicted RBP25.06■■□□□ 1.6
HOMER3-204ENST00000539827 CHMP2AO43633 222 aa25.06■■□□□ 1.6
HOMER3-204ENST00000539827 PPP1R12BO60237 982 aaPredicted RBP25.06■■□□□ 1.6
HOMER3-204ENST00000539827 PSMC6P62333 389 aa25.06■■□□□ 1.6
HOMER3-204ENST00000539827 CYP4A11Q02928 519 aa25.06■■□□□ 1.6
HOMER3-204ENST00000539827 NOLC1Q14978 699 aaKnown RBP eCLIP25.06■■□□□ 1.6
HOMER3-204ENST00000539827 NR1I3Q14994 352 aa25.06■■□□□ 1.6
HOMER3-204ENST00000539827 GPR162Q16538 588 aa25.06■■□□□ 1.6
HOMER3-204ENST00000539827 ARMCX5Q6P1M9 558 aa25.06■■□□□ 1.6
HOMER3-204ENST00000539827 OTOP1Q7RTM1 612 aa25.06■■□□□ 1.6
HOMER3-204ENST00000539827 GPBP1Q86WP2 473 aa25.06■■□□□ 1.6
HOMER3-204ENST00000539827 DNAJC19Q96DA6 116 aa25.06■■□□□ 1.6
HOMER3-204ENST00000539827 EIF2AK1Q9BQI3 630 aaKnown RBP25.06■■□□□ 1.6
HOMER3-204ENST00000539827 ZNF577Q9BSK1 485 aa25.06■■□□□ 1.6
HOMER3-204ENST00000539827 PNMA2Q9UL42 364 aa25.06■■□□□ 1.6
HOMER3-204ENST00000539827 CSADQ9Y600 493 aa25.06■■□□□ 1.6
HOMER3-204ENST00000539827 NPHP3-ACAD11A0A0J9YXS1 232 aa25.05■■□□□ 1.6
HOMER3-204ENST00000539827 A0A1B0GTH6 734 aa25.05■■□□□ 1.6
HOMER3-204ENST00000539827 EPHX2P34913 555 aa25.05■■□□□ 1.6
HOMER3-204ENST00000539827 SNRNP48Q6IEG0 339 aaKnown RBP25.05■■□□□ 1.6
HOMER3-204ENST00000539827 CREBRFQ8IUR6 639 aa25.05■■□□□ 1.6
HOMER3-204ENST00000539827 L3MBTL3Q96JM7 780 aaPredicted RBP25.05■■□□□ 1.6
HOMER3-204ENST00000539827 RABGAP1Q9Y3P9 1069 aa25.05■■□□□ 1.6
HOMER3-204ENST00000539827 STK24Q9Y6E0 443 aa25.05■■□□□ 1.6
HOMER3-204ENST00000539827 GAS7O60861 476 aa25.05■■□□□ 1.6
HOMER3-204ENST00000539827 SH3D19Q5HYK7 790 aa25.05■■□□□ 1.6
HOMER3-204ENST00000539827 RNF207Q6ZRF8 634 aa25.05■■□□□ 1.6
HOMER3-204ENST00000539827 USP50Q70EL3 339 aaPredicted RBP25.05■■□□□ 1.6
HOMER3-204ENST00000539827 TRIM47Q96LD4 638 aa25.05■■□□□ 1.6
HOMER3-204ENST00000539827 PURBQ96QR8 312 aaKnown RBP25.05■■□□□ 1.6
HOMER3-204ENST00000539827 GTPBP4Q9BZE4 634 aaKnown RBP25.05■■□□□ 1.6
HOMER3-204ENST00000539827 RGL1Q9NZL6 768 aa25.05■■□□□ 1.6
HOMER3-204ENST00000539827 ADAMTS5Q9UNA0 930 aa25.05■■□□□ 1.6
HOMER3-204ENST00000539827 WDR90Q96KV7 1748 aa25.05■■□□□ 1.6
HOMER3-204ENST00000539827 TEX33O43247 280 aa25.04■■□□□ 1.6
HOMER3-204ENST00000539827 ITGB5P18084 799 aa25.04■■□□□ 1.6
HOMER3-204ENST00000539827 EIF2AK2P19525 551 aaKnown RBP25.04■■□□□ 1.6
HOMER3-204ENST00000539827 SETQ01105 290 aaPredicted RBP25.04■■□□□ 1.6
HOMER3-204ENST00000539827 MOB2Q70IA6 237 aa25.04■■□□□ 1.6
HOMER3-204ENST00000539827 P2RX5Q93086 422 aa25.04■■□□□ 1.6
HOMER3-204ENST00000539827 CDCA5Q96FF9 252 aa25.04■■□□□ 1.6
HOMER3-204ENST00000539827 BMP2KQ9NSY1 1161 aaPredicted RBP25.04■■□□□ 1.6
HOMER3-204ENST00000539827 MAP3K20Q9NYL2 800 aaKnown RBP25.04■■□□□ 1.6
HOMER3-204ENST00000539827 PKD2L1Q9P0L9 805 aa25.04■■□□□ 1.6
HOMER3-204ENST00000539827 RBBP6Q7Z6E9 1792 aaKnown RBP25.04■■□□□ 1.6
HOMER3-204ENST00000539827 CCNE1P24864 410 aa25.04■■□□□ 1.6
HOMER3-204ENST00000539827 SLC12A3P55017 1021 aa25.04■■□□□ 1.6
HOMER3-204ENST00000539827 CCZ1BP86790 482 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms