RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 CSPG5O95196 566 aa17.39■□□□□ 0.37
USB1-203ENST00000539737 NT5C2P49902 561 aa17.39■□□□□ 0.37
USB1-203ENST00000539737 PWP2Q15269 919 aaKnown RBP17.39■□□□□ 0.37
USB1-203ENST00000539737 C7orf31Q8N865 590 aa17.39■□□□□ 0.37
USB1-203ENST00000539737 IL25Q9H293 177 aa17.39■□□□□ 0.37
USB1-203ENST00000539737 HCN4Q9Y3Q4 1203 aa17.39■□□□□ 0.37
USB1-203ENST00000539737 DOCK5Q9H7D0 1870 aa17.38■□□□□ 0.37
USB1-203ENST00000539737 B4E1Z4 1266 aa17.38■□□□□ 0.37
USB1-203ENST00000539737 ZNF213O14771 459 aa17.38■□□□□ 0.37
USB1-203ENST00000539737 PPP1R11O60927 126 aaPredicted RBP17.38■□□□□ 0.37
USB1-203ENST00000539737 KDM4AO75164 1064 aa17.38■□□□□ 0.37
USB1-203ENST00000539737 RGS20O76081 388 aa17.38■□□□□ 0.37
USB1-203ENST00000539737 MYCLP12524 364 aaPredicted RBP17.38■□□□□ 0.37
USB1-203ENST00000539737 CASTP20810 708 aaKnown RBP17.38■□□□□ 0.37
USB1-203ENST00000539737 ERVK-21P61565 698 aa17.38■□□□□ 0.37
USB1-203ENST00000539737 IMMTQ16891 758 aaKnown RBP17.38■□□□□ 0.37
USB1-203ENST00000539737 ARHGEF16Q5VV41 709 aa17.38■□□□□ 0.37
USB1-203ENST00000539737 SESTD1Q86VW0 696 aa17.38■□□□□ 0.37
USB1-203ENST00000539737 MYOCDQ8IZQ8 938 aa17.38■□□□□ 0.37
USB1-203ENST00000539737 STAG2Q8N3U4 1231 aa17.38■□□□□ 0.37
USB1-203ENST00000539737 CCDC155Q8N6L0 562 aa17.38■□□□□ 0.37
USB1-203ENST00000539737 PNMA1Q8ND90 353 aa17.38■□□□□ 0.37
USB1-203ENST00000539737 ESR2Q92731 530 aa17.38■□□□□ 0.37
USB1-203ENST00000539737 TGS1Q96RS0 853 aaKnown RBP17.38■□□□□ 0.37
USB1-203ENST00000539737 RAD9AQ99638 391 aa17.38■□□□□ 0.37
USB1-203ENST00000539737 MRVI1Q9Y6F6 885 aa17.38■□□□□ 0.37
USB1-203ENST00000539737 WDFY4Q6ZS81 3184 aa17.38■□□□□ 0.37
USB1-203ENST00000539737 ATG2AQ2TAZ0 1938 aa17.37■□□□□ 0.37
USB1-203ENST00000539737 PIEZO1Q92508 2521 aa17.37■□□□□ 0.37
USB1-203ENST00000539737 CDC45O75419 566 aa17.37■□□□□ 0.37
USB1-203ENST00000539737 CFBP00751 764 aa17.37■□□□□ 0.37
USB1-203ENST00000539737 CTSHP09668 335 aa17.37■□□□□ 0.37
USB1-203ENST00000539737 HOXA13P31271 388 aaPredicted RBP17.37■□□□□ 0.37
USB1-203ENST00000539737 SP2Q02086 613 aa17.37■□□□□ 0.37
USB1-203ENST00000539737 STXBP2Q15833 593 aa17.37■□□□□ 0.37
USB1-203ENST00000539737 DGKDQ16760 1214 aa17.37■□□□□ 0.37
USB1-203ENST00000539737 CCDC178Q5BJE1 867 aa17.37■□□□□ 0.37
USB1-203ENST00000539737 DBF4BQ8NFT6 615 aa17.37■□□□□ 0.37
USB1-203ENST00000539737 NSUN6Q8TEA1 469 aaKnown RBP17.37■□□□□ 0.37
USB1-203ENST00000539737 MPHOSPH6Q99547 160 aaKnown RBP17.37■□□□□ 0.37
USB1-203ENST00000539737 JMJD4Q9H9V9 463 aa17.37■□□□□ 0.37
USB1-203ENST00000539737 PXMP2Q9NR77 195 aa17.37■□□□□ 0.37
USB1-203ENST00000539737 PNMA2Q9UL42 364 aa17.37■□□□□ 0.37
USB1-203ENST00000539737 ABCB11O95342 1321 aa17.37■□□□□ 0.37
USB1-203ENST00000539737 HAS3O00219 553 aa17.36■□□□□ 0.37
USB1-203ENST00000539737 LGR5O75473 907 aa17.36■□□□□ 0.37
USB1-203ENST00000539737 UPP2O95045 317 aa17.36■□□□□ 0.37
USB1-203ENST00000539737 F2P00734 622 aa17.36■□□□□ 0.37
USB1-203ENST00000539737 THPOP40225 353 aa17.36■□□□□ 0.37
USB1-203ENST00000539737 SLC35G1Q2M3R5 365 aa17.36■□□□□ 0.37
USB1-203ENST00000539737 HSDL1Q3SXM5 330 aa17.36■□□□□ 0.37
USB1-203ENST00000539737 EP400NLQ6ZTU2 488 aa17.36■□□□□ 0.37
USB1-203ENST00000539737 FBXO22Q8NEZ5 403 aa17.36■□□□□ 0.37
USB1-203ENST00000539737 ESYT1Q9BSJ8 1104 aa17.36■□□□□ 0.37
USB1-203ENST00000539737 U3KPZ7 1027 aaPredicted RBP17.36■□□□□ 0.37
USB1-203ENST00000539737 BAZ2BQ9UIF8 2168 aaKnown RBP17.36■□□□□ 0.37
USB1-203ENST00000539737 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.35■□□□□ 0.37
USB1-203ENST00000539737 PI4K2BG5E9Z4 385 aa17.35■□□□□ 0.37
USB1-203ENST00000539737 NR3C2P08235 984 aa17.35■□□□□ 0.37
USB1-203ENST00000539737 SSTR3P32745 418 aaPredicted RBP17.35■□□□□ 0.37
USB1-203ENST00000539737 RBL2Q08999 1139 aa17.35■□□□□ 0.37
USB1-203ENST00000539737 MKRN4PQ13434 485 aaPredicted RBP17.35■□□□□ 0.37
USB1-203ENST00000539737 GPATCH4Q5T3I0 446 aaKnown RBP17.35■□□□□ 0.37
USB1-203ENST00000539737 PTCRAQ6ISU1 281 aaPredicted RBP17.35■□□□□ 0.37
USB1-203ENST00000539737 ALYREFQ86V81 257 aaKnown RBP17.35■□□□□ 0.37
USB1-203ENST00000539737 IQCA1Q86XH1 822 aa17.35■□□□□ 0.37
USB1-203ENST00000539737 FBXO11Q86XK2 927 aa17.35■□□□□ 0.37
USB1-203ENST00000539737 FAM178BQ8IXR5 827 aa17.35■□□□□ 0.37
USB1-203ENST00000539737 DHX37Q8IY37 1157 aaKnown RBP17.35■□□□□ 0.37
USB1-203ENST00000539737 ENAHQ8N8S7 591 aaPredicted RBP17.35■□□□□ 0.37
USB1-203ENST00000539737 TTC14Q96N46 770 aa17.35■□□□□ 0.37
USB1-203ENST00000539737 UIMC1Q96RL1 719 aa17.35■□□□□ 0.37
USB1-203ENST00000539737 ABHD14A-ACY1A0A1B0GW23 586 aa17.34■□□□□ 0.37
USB1-203ENST00000539737 GPR37L1O60883 481 aa17.34■□□□□ 0.37
USB1-203ENST00000539737 GGPS1O95749 300 aa17.34■□□□□ 0.37
USB1-203ENST00000539737 PTK7Q13308 1070 aa17.34■□□□□ 0.37
USB1-203ENST00000539737 IKBKEQ14164 716 aa17.34■□□□□ 0.37
USB1-203ENST00000539737 GJD3Q8N144 294 aa17.34■□□□□ 0.37
USB1-203ENST00000539737 RGS22Q8NE09 1264 aa17.34■□□□□ 0.37
USB1-203ENST00000539737 KAT14Q9H8E8 782 aa17.34■□□□□ 0.37
USB1-203ENST00000539737 TREHO43280 583 aa17.33■□□□□ 0.36
USB1-203ENST00000539737 UBA1P22314 1058 aaKnown RBP17.33■□□□□ 0.36
USB1-203ENST00000539737 CLUL1Q15846 466 aa17.33■□□□□ 0.36
USB1-203ENST00000539737 LEXMQ3ZCV2 418 aa17.33■□□□□ 0.36
USB1-203ENST00000539737 MYSM1Q5VVJ2 828 aa17.33■□□□□ 0.36
USB1-203ENST00000539737 TRIM50Q86XT4 487 aa17.33■□□□□ 0.36
USB1-203ENST00000539737 PPTC7Q8NI37 304 aa17.33■□□□□ 0.36
USB1-203ENST00000539737 SPATA33Q96N06 139 aa17.33■□□□□ 0.36
USB1-203ENST00000539737 PDCD2LQ9BRP1 358 aa17.33■□□□□ 0.36
USB1-203ENST00000539737 C16orf70Q9BSU1 422 aa17.33■□□□□ 0.36
USB1-203ENST00000539737 NLRC5Q86WI3 1866 aa17.33■□□□□ 0.36
USB1-203ENST00000539737 B4DLN1 442 aa17.32■□□□□ 0.36
USB1-203ENST00000539737 EIF3JO75822 258 aaKnown RBP17.32■□□□□ 0.36
USB1-203ENST00000539737 PARP1P09874 1014 aaKnown RBP17.32■□□□□ 0.36
USB1-203ENST00000539737 MRPL12P52815 198 aaKnown RBP17.32■□□□□ 0.36
USB1-203ENST00000539737 PTH1RQ03431 593 aa17.32■□□□□ 0.36
USB1-203ENST00000539737 EPC2Q52LR7 807 aa17.32■□□□□ 0.36
USB1-203ENST00000539737 TCEAL5Q5H9L2 206 aa17.32■□□□□ 0.36
USB1-203ENST00000539737 HOMER1Q86YM7 354 aa17.32■□□□□ 0.36
USB1-203ENST00000539737 IWS1Q96ST2 819 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms