RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 RASSF7Q02833 373 aa14.63□□□□□ -0.07
UBE3B-209ENST00000539584 SLC18A3Q16572 532 aa14.63□□□□□ -0.07
UBE3B-209ENST00000539584 IFI16Q16666 785 aaKnown RBP14.63□□□□□ -0.07
UBE3B-209ENST00000539584 ASPRV1Q53RT3 343 aa14.63□□□□□ -0.07
UBE3B-209ENST00000539584 HYIQ5T013 277 aa14.63□□□□□ -0.07
UBE3B-209ENST00000539584 ICE2Q659A1 982 aa14.63□□□□□ -0.07
UBE3B-209ENST00000539584 TBC1D9BQ66K14 1250 aa14.63□□□□□ -0.07
UBE3B-209ENST00000539584 ZNF804AQ7Z570 1209 aa14.63□□□□□ -0.07
UBE3B-209ENST00000539584 NBPF5PQ86XG9 351 aaPredicted RBP14.63□□□□□ -0.07
UBE3B-209ENST00000539584 SLF2Q8IX21 1173 aa14.63□□□□□ -0.07
UBE3B-209ENST00000539584 TGFBRAP1Q8WUH2 860 aa14.63□□□□□ -0.07
UBE3B-209ENST00000539584 DDX12PQ92771 950 aa14.63□□□□□ -0.07
UBE3B-209ENST00000539584 PAGR1Q9BTK6 254 aa14.63□□□□□ -0.07
UBE3B-209ENST00000539584 AIPL1Q9NZN9 384 aa14.63□□□□□ -0.07
UBE3B-209ENST00000539584 ATP6V0A2Q9Y487 856 aa14.63□□□□□ -0.07
UBE3B-209ENST00000539584 GRIN2DO15399 1336 aa14.63□□□□□ -0.07
UBE3B-209ENST00000539584 ADCY7P51828 1080 aa14.62□□□□□ -0.07
UBE3B-209ENST00000539584 KCNMA1Q12791 1236 aa14.62□□□□□ -0.07
UBE3B-209ENST00000539584 TDRD12Q587J7 1177 aaKnown RBP14.62□□□□□ -0.07
UBE3B-209ENST00000539584 FAM83BQ5T0W9 1011 aa14.62□□□□□ -0.07
UBE3B-209ENST00000539584 CFAP58Q5T655 872 aa14.62□□□□□ -0.07
UBE3B-209ENST00000539584 KDM7AQ6ZMT4 941 aa14.62□□□□□ -0.07
UBE3B-209ENST00000539584 BARGINQ6ZT62 677 aa14.62□□□□□ -0.07
UBE3B-209ENST00000539584 MICALCLQ6ZW33 695 aa14.62□□□□□ -0.07
UBE3B-209ENST00000539584 SNX29Q8TEQ0 813 aa14.62□□□□□ -0.07
UBE3B-209ENST00000539584 MTMR8Q96EF0 704 aa14.62□□□□□ -0.07
UBE3B-209ENST00000539584 RBM12Q9NTZ6 932 aaKnown RBP14.62□□□□□ -0.07
UBE3B-209ENST00000539584 BZW2Q9Y6E2 419 aaKnown RBP14.62□□□□□ -0.07
UBE3B-209ENST00000539584 GOLGA8HP0CJ92 632 aa14.61□□□□□ -0.07
UBE3B-209ENST00000539584 USP8P40818 1118 aa14.61□□□□□ -0.07
UBE3B-209ENST00000539584 CCT5P48643 541 aa14.61□□□□□ -0.07
UBE3B-209ENST00000539584 TNNC1P63316 161 aa14.61□□□□□ -0.07
UBE3B-209ENST00000539584 GFPT1Q06210 699 aaPredicted RBP14.61□□□□□ -0.07
UBE3B-209ENST00000539584 EZH2Q15910 746 aaKnown RBP14.61□□□□□ -0.07
UBE3B-209ENST00000539584 FAM163AQ96GL9 167 aaPredicted RBP14.61□□□□□ -0.07
UBE3B-209ENST00000539584 DRC1Q96MC2 740 aa14.61□□□□□ -0.07
UBE3B-209ENST00000539584 TANGO6Q9C0B7 1094 aa14.61□□□□□ -0.07
UBE3B-209ENST00000539584 GGA2Q9UJY4 613 aa14.61□□□□□ -0.07
UBE3B-209ENST00000539584 FAM169AQ9Y6X4 670 aa14.61□□□□□ -0.07
UBE3B-209ENST00000539584 PLIN4Q96Q06 1357 aa14.61□□□□□ -0.07
UBE3B-209ENST00000539584 NAV1Q8NEY1 1877 aa14.61□□□□□ -0.07
UBE3B-209ENST00000539584 COL24A1Q17RW2 1714 aa14.61□□□□□ -0.07
UBE3B-209ENST00000539584 SNED1Q8TER0 1413 aa14.61□□□□□ -0.07
UBE3B-209ENST00000539584 GPR75-ASB3A0A0A6YYF3 556 aa14.61□□□□□ -0.07
UBE3B-209ENST00000539584 A0A0G2JS52 829 aa14.61□□□□□ -0.07
UBE3B-209ENST00000539584 ERLIN2O94905 339 aa14.61□□□□□ -0.07
UBE3B-209ENST00000539584 MATR3P43243 847 aaKnown RBP eCLIP14.61□□□□□ -0.07
UBE3B-209ENST00000539584 NAP1L1P55209 391 aaKnown RBP14.61□□□□□ -0.07
UBE3B-209ENST00000539584 CDC37Q16543 378 aaPredicted RBP14.61□□□□□ -0.07
UBE3B-209ENST00000539584 CCDC40Q4G0X9 1142 aa14.61□□□□□ -0.07
UBE3B-209ENST00000539584 MEI1Q5TIA1 1274 aa14.61□□□□□ -0.07
UBE3B-209ENST00000539584 YTHDF3Q7Z739 585 aaKnown RBP14.61□□□□□ -0.07
UBE3B-209ENST00000539584 PACS2Q86VP3 889 aa14.61□□□□□ -0.07
UBE3B-209ENST00000539584 CCDC65Q8IXS2 484 aa14.61□□□□□ -0.07
UBE3B-209ENST00000539584 PIGSQ96S52 555 aa14.61□□□□□ -0.07
UBE3B-209ENST00000539584 RTFDC1Q9BY42 306 aaPredicted RBP14.61□□□□□ -0.07
UBE3B-209ENST00000539584 GLT8D2Q9H1C3 349 aa14.61□□□□□ -0.07
UBE3B-209ENST00000539584 BIN2Q9UBW5 565 aaPredicted RBP14.61□□□□□ -0.07
UBE3B-209ENST00000539584 SWAP70Q9UH65 585 aa14.61□□□□□ -0.07
UBE3B-209ENST00000539584 HMGB1P1B2RPK0 211 aaPredicted RBP14.6□□□□□ -0.07
UBE3B-209ENST00000539584 TM4SF1P30408 202 aa14.6□□□□□ -0.07
UBE3B-209ENST00000539584 SLC1A4P43007 532 aa14.6□□□□□ -0.07
UBE3B-209ENST00000539584 SLC7A5Q01650 507 aa14.6□□□□□ -0.07
UBE3B-209ENST00000539584 FAM26FQ5R3K3 315 aa14.6□□□□□ -0.07
UBE3B-209ENST00000539584 USP17L2Q6R6M4 530 aa14.6□□□□□ -0.07
UBE3B-209ENST00000539584 LRIG3Q6UXM1 1119 aa14.6□□□□□ -0.07
UBE3B-209ENST00000539584 DYMQ7RTS9 669 aa14.6□□□□□ -0.07
UBE3B-209ENST00000539584 ZC3H3Q8IXZ2 948 aaKnown RBP14.6□□□□□ -0.07
UBE3B-209ENST00000539584 ARFGAP2Q8N6H7 521 aa14.6□□□□□ -0.07
UBE3B-209ENST00000539584 IPO4Q8TEX9 1081 aaKnown RBP14.6□□□□□ -0.07
UBE3B-209ENST00000539584 HPS3Q969F9 1004 aa14.6□□□□□ -0.07
UBE3B-209ENST00000539584 ZIM3Q96PE6 472 aa14.6□□□□□ -0.07
UBE3B-209ENST00000539584 SALL4Q9UJQ4 1053 aa14.6□□□□□ -0.07
UBE3B-209ENST00000539584 C10orf71Q711Q0 1435 aa14.6□□□□□ -0.07
UBE3B-209ENST00000539584 TRAF5O00463 557 aa14.59□□□□□ -0.07
UBE3B-209ENST00000539584 HEXIM1O94992 359 aaKnown RBP14.59□□□□□ -0.07
UBE3B-209ENST00000539584 CXCR5P32302 372 aa14.59□□□□□ -0.07
UBE3B-209ENST00000539584 CUL1Q13616 776 aa14.59□□□□□ -0.07
UBE3B-209ENST00000539584 EDRF1Q3B7T1 1238 aa14.59□□□□□ -0.07
UBE3B-209ENST00000539584 TTMPQ5BVD1 217 aa14.59□□□□□ -0.07
UBE3B-209ENST00000539584 MMS22LQ6ZRQ5 1243 aa14.59□□□□□ -0.07
UBE3B-209ENST00000539584 TXNRD3Q86VQ6 643 aa14.59□□□□□ -0.07
UBE3B-209ENST00000539584 TRIM59Q8IWR1 403 aa14.59□□□□□ -0.07
UBE3B-209ENST00000539584 TSEN2Q8NCE0 465 aaKnown RBP14.59□□□□□ -0.07
UBE3B-209ENST00000539584 LINC00116Q8NCU8 138 aa14.59□□□□□ -0.07
UBE3B-209ENST00000539584 C3orf20Q8ND61 904 aa14.59□□□□□ -0.07
UBE3B-209ENST00000539584 DNAJC19Q96DA6 116 aa14.59□□□□□ -0.07
UBE3B-209ENST00000539584 PBKQ96KB5 322 aa14.59□□□□□ -0.07
UBE3B-209ENST00000539584 CALR3Q96L12 384 aaKnown RBP14.59□□□□□ -0.07
UBE3B-209ENST00000539584 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.59□□□□□ -0.07
UBE3B-209ENST00000539584 TNRC6CQ9HCJ0 1690 aaKnown RBP14.59□□□□□ -0.07
UBE3B-209ENST00000539584 STRCQ7RTU9 1775 aa14.59□□□□□ -0.07
UBE3B-209ENST00000539584 VGLL3A8MV65 326 aa14.59□□□□□ -0.07
UBE3B-209ENST00000539584 NKRFO15226 690 aaKnown RBP eCLIP14.59□□□□□ -0.07
UBE3B-209ENST00000539584 RPS6KA4O75676 772 aa14.59□□□□□ -0.07
UBE3B-209ENST00000539584 PALMO75781 387 aa14.59□□□□□ -0.07
UBE3B-209ENST00000539584 NOL4O94818 638 aa14.59□□□□□ -0.07
UBE3B-209ENST00000539584 SNHG28P0DPA3 235 aa14.59□□□□□ -0.07
UBE3B-209ENST00000539584 COASYQ13057 564 aa14.59□□□□□ -0.07
UBE3B-209ENST00000539584 MAPKAPK5Q8IW41 473 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms