RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 RIOK3O14730 519 aaKnown RBP9.94□□□□□ -0.82
DDB1-213ENST00000539332 PRR29P0C7W0 189 aa9.94□□□□□ -0.82
DDB1-213ENST00000539332 ALAS1P13196 640 aa9.94□□□□□ -0.82
DDB1-213ENST00000539332 OSBPP22059 807 aa9.94□□□□□ -0.82
DDB1-213ENST00000539332 TXLNAP40222 546 aa9.94□□□□□ -0.82
DDB1-213ENST00000539332 ARHGAP4P98171 946 aa9.94□□□□□ -0.82
DDB1-213ENST00000539332 PDIA5Q14554 519 aa9.94□□□□□ -0.82
DDB1-213ENST00000539332 CALCRLQ16602 461 aa9.94□□□□□ -0.82
DDB1-213ENST00000539332 NAALADL2Q58DX5 795 aa9.94□□□□□ -0.82
DDB1-213ENST00000539332 SNRNP48Q6IEG0 339 aaKnown RBP9.94□□□□□ -0.82
DDB1-213ENST00000539332 ANKRD23Q86SG2 305 aa9.94□□□□□ -0.82
DDB1-213ENST00000539332 LUZP1Q86V48 1076 aa9.94□□□□□ -0.82
DDB1-213ENST00000539332 PDILTQ8N807 584 aa9.94□□□□□ -0.82
DDB1-213ENST00000539332 CLEC4DQ8WXI8 215 aa9.94□□□□□ -0.82
DDB1-213ENST00000539332 DHX58Q96C10 678 aa9.94□□□□□ -0.82
DDB1-213ENST00000539332 PAGE5Q96GU1 130 aa9.94□□□□□ -0.82
DDB1-213ENST00000539332 CCDC34Q96HJ3 373 aa9.94□□□□□ -0.82
DDB1-213ENST00000539332 CUEDC2Q9H467 287 aa9.94□□□□□ -0.82
DDB1-213ENST00000539332 KCNMB3Q9NPA1 279 aa9.94□□□□□ -0.82
DDB1-213ENST00000539332 HOMER2Q9NSB8 354 aa9.94□□□□□ -0.82
DDB1-213ENST00000539332 RIPK3Q9Y572 518 aa9.94□□□□□ -0.82
DDB1-213ENST00000539332 ZNFX1Q9P2E3 1918 aaKnown RBP9.94□□□□□ -0.82
DDB1-213ENST00000539332 TESPA1A2RU30 521 aaPredicted RBP9.93□□□□□ -0.82
DDB1-213ENST00000539332 FAM155AB1AL88 458 aaPredicted RBP9.93□□□□□ -0.82
DDB1-213ENST00000539332 NFIBO00712 420 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 SLC26A4O43511 780 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 SLC10A3P09131 477 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 HOXA13P31271 388 aaPredicted RBP9.93□□□□□ -0.82
DDB1-213ENST00000539332 STAT3P40763 770 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 HSD17B4P51659 736 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 DPYDQ12882 1025 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 PLS1Q14651 629 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 MUM1L1Q5H9M0 696 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 DHX40Q8IX18 779 aaKnown RBP9.93□□□□□ -0.82
DDB1-213ENST00000539332 SAMD3Q8N6K7 520 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 TBC1D5Q92609 795 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 HAS1Q92839 578 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 CCDC102AQ96A19 550 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 LENG9Q96B70 501 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 HHIPL1Q96JK4 782 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 TRERF1Q96PN7 1200 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 MTRQ99707 1265 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 PTPN18Q99952 460 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 MMTAG2Q9BU76 263 aaKnown RBP9.93□□□□□ -0.82
DDB1-213ENST00000539332 MAGEF1Q9HAY2 307 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 BTBD7Q9P203 1132 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 DDX25Q9UHL0 483 aaKnown RBP9.93□□□□□ -0.82
DDB1-213ENST00000539332 MAN1B1Q9UKM7 699 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 PNMA3Q9UL41 463 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 A0A087WWV3 80 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 PP2D1A8MPX8 630 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 GCOM1H8Y6P7 765 aaPredicted RBP9.93□□□□□ -0.82
DDB1-213ENST00000539332 IKBKBO14920 756 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 TBX3O15119 743 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 AP5Z1O43299 807 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 PEX10O60683 326 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 CFBP00751 764 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 POLR2MP0CAP2 368 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 CYP2C8P10632 490 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 BMP6P22004 513 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 MORC3Q14149 939 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 KARSQ15046 597 aaKnown RBP9.93□□□□□ -0.82
DDB1-213ENST00000539332 Q4G0T1 1027 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 SARM1Q6SZW1 724 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 ETNPPLQ8TBG4 499 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 LRRC15Q8TF66 581 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 ZNF830Q96NB3 372 aaPredicted RBP9.93□□□□□ -0.82
DDB1-213ENST00000539332 NAT10Q9H0A0 1025 aaKnown RBP9.93□□□□□ -0.82
DDB1-213ENST00000539332 PRDM16Q9HAZ2 1276 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 RNF146Q9NTX7 359 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 RBPJLQ9UBG7 517 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 FRMPD4Q14CM0 1322 aa9.93□□□□□ -0.82
DDB1-213ENST00000539332 MANSC4A6NHS7 340 aaPredicted RBP9.92□□□□□ -0.82
DDB1-213ENST00000539332 SPDYE3A6NKU9 549 aa9.92□□□□□ -0.82
DDB1-213ENST00000539332 MYL1P05976 194 aa9.92□□□□□ -0.82
DDB1-213ENST00000539332 UBA7P41226 1012 aa9.92□□□□□ -0.82
DDB1-213ENST00000539332 SEMA3FQ13275 785 aa9.92□□□□□ -0.82
DDB1-213ENST00000539332 TMEM266Q2M3C6 531 aa9.92□□□□□ -0.82
DDB1-213ENST00000539332 HYIQ5T013 277 aa9.92□□□□□ -0.82
DDB1-213ENST00000539332 CABP7Q86V35 215 aa9.92□□□□□ -0.82
DDB1-213ENST00000539332 MCF2L2Q86YR7 1114 aa9.92□□□□□ -0.82
DDB1-213ENST00000539332 GRAMD1CQ8IYS0 662 aa9.92□□□□□ -0.82
DDB1-213ENST00000539332 SMCR8Q8TEV9 937 aaPredicted RBP9.92□□□□□ -0.82
DDB1-213ENST00000539332 SMARCE1Q969G3 411 aa9.92□□□□□ -0.82
DDB1-213ENST00000539332 GSDMAQ96QA5 445 aa9.92□□□□□ -0.82
DDB1-213ENST00000539332 PAGR1Q9BTK6 254 aa9.92□□□□□ -0.82
DDB1-213ENST00000539332 RAB34Q9BZG1 259 aa9.92□□□□□ -0.82
DDB1-213ENST00000539332 SPATC1LQ9H0A9 340 aa9.92□□□□□ -0.82
DDB1-213ENST00000539332 TXNRD2Q9NNW7 524 aa9.92□□□□□ -0.82
DDB1-213ENST00000539332 KBTBD4Q9NVX7 518 aa9.92□□□□□ -0.82
DDB1-213ENST00000539332 RABGAP1Q9Y3P9 1069 aa9.92□□□□□ -0.82
DDB1-213ENST00000539332 RPTORQ8N122 1335 aa9.92□□□□□ -0.82
DDB1-213ENST00000539332 DOCK3Q8IZD9 2030 aa9.91□□□□□ -0.82
DDB1-213ENST00000539332 BIN1O00499 593 aa9.91□□□□□ -0.82
DDB1-213ENST00000539332 CNMDO75829 334 aa9.91□□□□□ -0.82
DDB1-213ENST00000539332 SMC2O95347 1197 aa9.91□□□□□ -0.82
DDB1-213ENST00000539332 CDC25AP30304 524 aa9.91□□□□□ -0.82
DDB1-213ENST00000539332 APLP1P51693 650 aa9.91□□□□□ -0.82
DDB1-213ENST00000539332 IRF5Q13568 498 aa9.91□□□□□ -0.82
DDB1-213ENST00000539332 NCAPHQ15003 741 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 178.8 ms