RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 C5orf42Q9H799 3197 aa8.36□□□□□ -1.07
LMO3-220ENST00000539232 UMODL1Q5DID0 1318 aa8.36□□□□□ -1.07
LMO3-220ENST00000539232 CNTNAP5Q8WYK1 1306 aa8.36□□□□□ -1.07
LMO3-220ENST00000539232 KMT2BQ9UMN6 2715 aaPredicted RBP8.36□□□□□ -1.07
LMO3-220ENST00000539232 KRT37O76014 449 aa8.36□□□□□ -1.07
LMO3-220ENST00000539232 TXNP10599 105 aaKnown RBP8.36□□□□□ -1.07
LMO3-220ENST00000539232 RAG1P15918 1043 aa8.36□□□□□ -1.07
LMO3-220ENST00000539232 MRPS9P82933 396 aaKnown RBP8.36□□□□□ -1.07
LMO3-220ENST00000539232 ARHGAP1Q07960 439 aa8.36□□□□□ -1.07
LMO3-220ENST00000539232 HIC1Q14526 733 aa8.36□□□□□ -1.07
LMO3-220ENST00000539232 RNF20Q5VTR2 975 aa8.36□□□□□ -1.07
LMO3-220ENST00000539232 WWC2Q6AWC2 1192 aa8.36□□□□□ -1.07
LMO3-220ENST00000539232 VSIG10LQ86VR7 867 aa8.36□□□□□ -1.07
LMO3-220ENST00000539232 MCF2L2Q86YR7 1114 aa8.36□□□□□ -1.07
LMO3-220ENST00000539232 DNERQ8NFT8 737 aa8.36□□□□□ -1.07
LMO3-220ENST00000539232 NSUN6Q8TEA1 469 aaKnown RBP8.36□□□□□ -1.07
LMO3-220ENST00000539232 RRP36Q96EU6 259 aaKnown RBP8.36□□□□□ -1.07
LMO3-220ENST00000539232 PGBD1Q96JS3 809 aa8.36□□□□□ -1.07
LMO3-220ENST00000539232 MAP3K14Q99558 947 aa8.36□□□□□ -1.07
LMO3-220ENST00000539232 TSEN34Q9BSV6 310 aaKnown RBP8.36□□□□□ -1.07
LMO3-220ENST00000539232 MTA3Q9BTC8 594 aa8.36□□□□□ -1.07
LMO3-220ENST00000539232 SLC28A3Q9HAS3 691 aa8.36□□□□□ -1.07
LMO3-220ENST00000539232 STARD7Q9NQZ5 370 aa8.36□□□□□ -1.07
LMO3-220ENST00000539232 RTEL1Q9NZ71 1219 aa8.36□□□□□ -1.07
LMO3-220ENST00000539232 DAXXQ9UER7 740 aaPredicted RBP8.36□□□□□ -1.07
LMO3-220ENST00000539232 ADD3Q9UEY8 706 aaKnown RBP8.36□□□□□ -1.07
LMO3-220ENST00000539232 COL11A1P12107 1806 aaPredicted RBP8.36□□□□□ -1.07
LMO3-220ENST00000539232 RIF1Q5UIP0 2472 aaKnown RBP8.35□□□□□ -1.07
LMO3-220ENST00000539232 GOLGA8AA7E2F4 631 aa8.35□□□□□ -1.07
LMO3-220ENST00000539232 GOLGA8BA8MQT2 603 aa8.35□□□□□ -1.07
LMO3-220ENST00000539232 GRXCR1A8MXD5 290 aa8.35□□□□□ -1.07
LMO3-220ENST00000539232 GCOM1H8Y6P7 765 aaPredicted RBP8.35□□□□□ -1.07
LMO3-220ENST00000539232 KIAA0355O15063 1070 aa8.35□□□□□ -1.07
LMO3-220ENST00000539232 ZBTB43O43298 467 aa8.35□□□□□ -1.07
LMO3-220ENST00000539232 GFRA3O60609 400 aa8.35□□□□□ -1.07
LMO3-220ENST00000539232 MYL3P08590 195 aa8.35□□□□□ -1.07
LMO3-220ENST00000539232 POLR2MP0CAP2 368 aa8.35□□□□□ -1.07
LMO3-220ENST00000539232 CASTP20810 708 aaKnown RBP8.35□□□□□ -1.07
LMO3-220ENST00000539232 CCT2P78371 535 aaKnown RBP8.35□□□□□ -1.07
LMO3-220ENST00000539232 PURAQ00577 322 aaKnown RBP8.35□□□□□ -1.07
LMO3-220ENST00000539232 PGM5Q15124 567 aa8.35□□□□□ -1.07
LMO3-220ENST00000539232 RTN1Q16799 776 aa8.35□□□□□ -1.07
LMO3-220ENST00000539232 ARHGEF16Q5VV41 709 aa8.35□□□□□ -1.07
LMO3-220ENST00000539232 C16orf59Q7L2K0 433 aa8.35□□□□□ -1.07
LMO3-220ENST00000539232 ANKRD33Q7Z3H0 272 aa8.35□□□□□ -1.07
LMO3-220ENST00000539232 HEATR3Q7Z4Q2 680 aa8.35□□□□□ -1.07
LMO3-220ENST00000539232 FAM126BQ8IXS8 530 aa8.35□□□□□ -1.07
LMO3-220ENST00000539232 SLC43A3Q8NBI5 491 aa8.35□□□□□ -1.07
LMO3-220ENST00000539232 OR6J1Q8NGC5 347 aa8.35□□□□□ -1.07
LMO3-220ENST00000539232 KAT2BQ92831 832 aa8.35□□□□□ -1.07
LMO3-220ENST00000539232 HLA-CQ95604 372 aa8.35□□□□□ -1.07
LMO3-220ENST00000539232 VTI1AQ96AJ9 217 aa8.35□□□□□ -1.07
LMO3-220ENST00000539232 CTAGE1Q96RT6 745 aa8.35□□□□□ -1.07
LMO3-220ENST00000539232 AP5M1Q9H0R1 490 aa8.35□□□□□ -1.07
LMO3-220ENST00000539232 ZSWIM6Q9HCJ5 1215 aa8.35□□□□□ -1.07
LMO3-220ENST00000539232 TMEM260Q9NX78 707 aa8.35□□□□□ -1.07
LMO3-220ENST00000539232 DDX41Q9UJV9 622 aaKnown RBP8.35□□□□□ -1.07
LMO3-220ENST00000539232 TBX21Q9UL17 535 aa8.35□□□□□ -1.07
LMO3-220ENST00000539232 NAP1L2Q9ULW6 460 aaPredicted RBP8.35□□□□□ -1.07
LMO3-220ENST00000539232 TPRP12270 2363 aaKnown RBP8.35□□□□□ -1.07
LMO3-220ENST00000539232 GBF1Q92538 1859 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 MOXD2PA6NHM9 499 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 A6NJR5 290 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 STXBP3O00186 592 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 ARVCFO00192 962 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 B4GALT4O60513 344 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 CD4P01730 458 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 CLTBP09497 229 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 CYP2C9P11712 490 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 POU3F3P20264 500 aaPredicted RBP8.34□□□□□ -1.07
LMO3-220ENST00000539232 SMARCA1P28370 1054 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 PDIA3P30101 505 aaKnown RBP8.34□□□□□ -1.07
LMO3-220ENST00000539232 KIF5BP33176 963 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 CYP2C18P33260 490 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 PTPN5P54829 565 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 CHMP4BP1P59074 171 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 KRT32Q14532 448 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 PPP2R5BQ15173 497 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 STXBP2Q15833 593 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 NTRK3Q16288 839 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 PKN1Q16512 942 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 RASIP1Q5U651 963 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 BLOC1S2Q6QNY1 142 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 GJD3Q8N144 294 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 TMTC2Q8N394 836 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 CYP2W1Q8TAV3 490 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 SCFD2Q8WU76 684 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 PHKBQ93100 1093 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 AIFM3Q96NN9 605 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.34□□□□□ -1.07
LMO3-220ENST00000539232 AGXT2Q9BYV1 514 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 TRMT13Q9NUP7 481 aaKnown RBP8.34□□□□□ -1.07
LMO3-220ENST00000539232 TMEM39AQ9NV64 488 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 PNMA2Q9UL42 364 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 FAM186AA6NE01 2351 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 CACNA1HO95180 2353 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 SMCHD1A6NHR9 2005 aa8.34□□□□□ -1.07
LMO3-220ENST00000539232 LAMA4Q16363 1823 aa8.33□□□□□ -1.08
LMO3-220ENST00000539232 ELP1O95163 1332 aa8.33□□□□□ -1.08
LMO3-220ENST00000539232 FRMPD4Q14CM0 1322 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms