RNA–Protein interactions for RNA: ENST00000538910.1

LPCAT3-207, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 5

Gene LPCAT3, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-207ENST00000538910 OPLAHO14841 1288 aa23.26■■□□□ 1.31
LPCAT3-207ENST00000538910 DHX16O60231 1041 aaKnown RBP23.26■■□□□ 1.31
LPCAT3-207ENST00000538910 LGR5O75473 907 aa23.26■■□□□ 1.31
LPCAT3-207ENST00000538910 CFBP00751 764 aa23.26■■□□□ 1.31
LPCAT3-207ENST00000538910 HSD17B4P51659 736 aa23.26■■□□□ 1.31
LPCAT3-207ENST00000538910 MYSM1Q5VVJ2 828 aa23.26■■□□□ 1.31
LPCAT3-207ENST00000538910 UBE2ZQ9H832 354 aaPredicted RBP23.26■■□□□ 1.31
LPCAT3-207ENST00000538910 C11orf16Q9NQ32 467 aa23.26■■□□□ 1.31
LPCAT3-207ENST00000538910 INSL6Q9Y581 213 aa23.26■■□□□ 1.31
LPCAT3-207ENST00000538910 RGS20O76081 388 aa23.25■■□□□ 1.31
LPCAT3-207ENST00000538910 RRP1P56182 461 aaKnown RBP23.25■■□□□ 1.31
LPCAT3-207ENST00000538910 MKRN4PQ13434 485 aaPredicted RBP23.25■■□□□ 1.31
LPCAT3-207ENST00000538910 HIC1Q14526 733 aa23.25■■□□□ 1.31
LPCAT3-207ENST00000538910 CELF3Q5SZQ8 465 aaKnown RBP23.25■■□□□ 1.31
LPCAT3-207ENST00000538910 FAM117BQ6P1L5 589 aa23.25■■□□□ 1.31
LPCAT3-207ENST00000538910 KCNV1Q6PIU1 500 aa23.25■■□□□ 1.31
LPCAT3-207ENST00000538910 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.25■■□□□ 1.31
LPCAT3-207ENST00000538910 STOX1Q6ZVD7 989 aa23.25■■□□□ 1.31
LPCAT3-207ENST00000538910 CRBNQ96SW2 442 aa23.25■■□□□ 1.31
LPCAT3-207ENST00000538910 PDCD2LQ9BRP1 358 aa23.25■■□□□ 1.31
LPCAT3-207ENST00000538910 AMNQ9BXJ7 453 aa23.25■■□□□ 1.31
LPCAT3-207ENST00000538910 LNPKQ9C0E8 428 aa23.25■■□□□ 1.31
LPCAT3-207ENST00000538910 MAP3K20Q9NYL2 800 aaKnown RBP23.25■■□□□ 1.31
LPCAT3-207ENST00000538910 RBAK-RBAKDNI3L0D1 243 aa23.24■■□□□ 1.31
LPCAT3-207ENST00000538910 HSDL1Q3SXM5 330 aa23.24■■□□□ 1.31
LPCAT3-207ENST00000538910 LEXMQ3ZCV2 418 aa23.24■■□□□ 1.31
LPCAT3-207ENST00000538910 VSIG10LQ86VR7 867 aa23.24■■□□□ 1.31
LPCAT3-207ENST00000538910 DBF4BQ8NFT6 615 aa23.24■■□□□ 1.31
LPCAT3-207ENST00000538910 EMSYQ7Z589 1322 aa23.24■■□□□ 1.31
LPCAT3-207ENST00000538910 HTRA4P83105 476 aaPredicted RBP23.23■■□□□ 1.31
LPCAT3-207ENST00000538910 SERINC5Q86VE9 423 aa23.23■■□□□ 1.31
LPCAT3-207ENST00000538910 MTMR8Q96EF0 704 aa23.23■■□□□ 1.31
LPCAT3-207ENST00000538910 SPATA33Q96N06 139 aa23.23■■□□□ 1.31
LPCAT3-207ENST00000538910 C17orf80Q9BSJ5 609 aa23.23■■□□□ 1.31
LPCAT3-207ENST00000538910 KIAA1217Q5T5P2 1943 aa23.22■■□□□ 1.31
LPCAT3-207ENST00000538910 RSPH10B2B2RC85 870 aa23.22■■□□□ 1.31
LPCAT3-207ENST00000538910 RSPH10BP0C881 870 aa23.22■■□□□ 1.31
LPCAT3-207ENST00000538910 TGFB3P10600 412 aa23.22■■□□□ 1.31
LPCAT3-207ENST00000538910 MYCLP12524 364 aaPredicted RBP23.22■■□□□ 1.31
LPCAT3-207ENST00000538910 SP2Q02086 613 aa23.22■■□□□ 1.31
LPCAT3-207ENST00000538910 CWC27Q6UX04 472 aaKnown RBP23.22■■□□□ 1.31
LPCAT3-207ENST00000538910 FAM178BQ8IXR5 827 aa23.22■■□□□ 1.31
LPCAT3-207ENST00000538910 STAG2Q8N3U4 1231 aa23.22■■□□□ 1.31
LPCAT3-207ENST00000538910 SAMD3Q8N6K7 520 aa23.22■■□□□ 1.31
LPCAT3-207ENST00000538910 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.22■■□□□ 1.31
LPCAT3-207ENST00000538910 C16orf70Q9BSU1 422 aa23.22■■□□□ 1.31
LPCAT3-207ENST00000538910 GGPS1O95749 300 aa23.21■■□□□ 1.31
LPCAT3-207ENST00000538910 AMHP03971 560 aa23.21■■□□□ 1.31
LPCAT3-207ENST00000538910 KCNA5P22460 613 aa23.21■■□□□ 1.31
LPCAT3-207ENST00000538910 THPOP40225 353 aa23.21■■□□□ 1.31
LPCAT3-207ENST00000538910 PLEKHG4Q58EX7 1191 aa23.21■■□□□ 1.31
LPCAT3-207ENST00000538910 FBXO22Q8NEZ5 403 aa23.21■■□□□ 1.31
LPCAT3-207ENST00000538910 SP7Q8TDD2 431 aaPredicted RBP23.21■■□□□ 1.31
LPCAT3-207ENST00000538910 DSCC1Q9BVC3 393 aa23.21■■□□□ 1.31
LPCAT3-207ENST00000538910 KRT23Q9C075 422 aa23.21■■□□□ 1.31
LPCAT3-207ENST00000538910 OSBPL3Q9H4L5 887 aa23.21■■□□□ 1.31
LPCAT3-207ENST00000538910 COL4A4P53420 1690 aaPredicted RBP23.21■■□□□ 1.31
LPCAT3-207ENST00000538910 FAM86C2PA6NEL3 165 aa23.2■■□□□ 1.3
LPCAT3-207ENST00000538910 ZBTB5O15062 677 aa23.2■■□□□ 1.3
LPCAT3-207ENST00000538910 PPP1R11O60927 126 aaPredicted RBP23.2■■□□□ 1.3
LPCAT3-207ENST00000538910 HOXC8P31273 242 aa23.2■■□□□ 1.3
LPCAT3-207ENST00000538910 PGM5Q15124 567 aa23.2■■□□□ 1.3
LPCAT3-207ENST00000538910 IMMTQ16891 758 aaKnown RBP23.2■■□□□ 1.3
LPCAT3-207ENST00000538910 MYOCDQ8IZQ8 938 aa23.2■■□□□ 1.3
LPCAT3-207ENST00000538910 GJD3Q8N144 294 aa23.2■■□□□ 1.3
LPCAT3-207ENST00000538910 CTNNA3Q9UI47 895 aa23.2■■□□□ 1.3
LPCAT3-207ENST00000538910 PCDHA1Q9Y5I3 950 aa23.2■■□□□ 1.3
LPCAT3-207ENST00000538910 KLRF2D3W0D1 207 aa23.19■■□□□ 1.3
LPCAT3-207ENST00000538910 SORBS3O60504 671 aa23.19■■□□□ 1.3
LPCAT3-207ENST00000538910 UBA1P22314 1058 aaKnown RBP23.19■■□□□ 1.3
LPCAT3-207ENST00000538910 HOXA13P31271 388 aaPredicted RBP23.19■■□□□ 1.3
LPCAT3-207ENST00000538910 IFIT1BQ5T764 474 aaKnown RBP23.19■■□□□ 1.3
LPCAT3-207ENST00000538910 PLEKHM2Q8IWE5 1019 aa23.19■■□□□ 1.3
LPCAT3-207ENST00000538910 SMC5Q8IY18 1101 aa23.19■■□□□ 1.3
LPCAT3-207ENST00000538910 IL31RAQ8NI17 732 aa23.19■■□□□ 1.3
LPCAT3-207ENST00000538910 ATP6V0A1Q93050 837 aa23.19■■□□□ 1.3
LPCAT3-207ENST00000538910 MRPL38Q96DV4 380 aaKnown RBP23.19■■□□□ 1.3
LPCAT3-207ENST00000538910 SAMD11Q96NU1 681 aa23.19■■□□□ 1.3
LPCAT3-207ENST00000538910 UBAC1Q9BSL1 405 aa23.19■■□□□ 1.3
LPCAT3-207ENST00000538910 C17orf102A2RUQ5 167 aa23.18■■□□□ 1.3
LPCAT3-207ENST00000538910 H3BRB1 525 aa23.18■■□□□ 1.3
LPCAT3-207ENST00000538910 EPC2Q52LR7 807 aa23.18■■□□□ 1.3
LPCAT3-207ENST00000538910 TOP1MTQ969P6 601 aa23.18■■□□□ 1.3
LPCAT3-207ENST00000538910 TUT1Q9H6E5 874 aaKnown RBP23.18■■□□□ 1.3
LPCAT3-207ENST00000538910 CNNM2Q9H8M5 875 aa23.18■■□□□ 1.3
LPCAT3-207ENST00000538910 MLXIPQ9HAP2 919 aa23.18■■□□□ 1.3
LPCAT3-207ENST00000538910 DIAPH3Q9NSV4 1193 aa23.18■■□□□ 1.3
LPCAT3-207ENST00000538910 MAD2L2Q9UI95 211 aa23.18■■□□□ 1.3
LPCAT3-207ENST00000538910 PALM3A6NDB9 673 aaPredicted RBP23.17■■□□□ 1.3
LPCAT3-207ENST00000538910 IL9P15248 144 aa23.17■■□□□ 1.3
LPCAT3-207ENST00000538910 SEC23AQ15436 765 aa23.17■■□□□ 1.3
LPCAT3-207ENST00000538910 PTPROQ16827 1216 aa23.17■■□□□ 1.3
LPCAT3-207ENST00000538910 PTCRAQ6ISU1 281 aaPredicted RBP23.17■■□□□ 1.3
LPCAT3-207ENST00000538910 NEK9Q8TD19 979 aa23.17■■□□□ 1.3
LPCAT3-207ENST00000538910 GPKOWQ92917 476 aaPredicted RBP eCLIP23.17■■□□□ 1.3
LPCAT3-207ENST00000538910 RNPEPQ9H4A4 650 aa23.17■■□□□ 1.3
LPCAT3-207ENST00000538910 GRXCR2A6NFK2 248 aa23.16■■□□□ 1.3
LPCAT3-207ENST00000538910 GCOM1H8Y6P7 765 aaPredicted RBP23.16■■□□□ 1.3
LPCAT3-207ENST00000538910 HIP1O00291 1037 aa23.16■■□□□ 1.3
LPCAT3-207ENST00000538910 TREHO43280 583 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms