RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	COPS5	Q92905	334 aa		14.13	□□□□□ -0.15
CLTCL1-205	ENST00000538828	GPRASP2	Q96D09	838 aa		14.13	□□□□□ -0.15
CLTCL1-205	ENST00000538828	KATNAL1	Q9BW62	490 aa		14.13	□□□□□ -0.15
CLTCL1-205	ENST00000538828	PRDM5	Q9NQX1	630 aa	Predicted RBP	14.13	□□□□□ -0.15
CLTCL1-205	ENST00000538828	STXBP3	O00186	592 aa		14.12	□□□□□ -0.15
CLTCL1-205	ENST00000538828	SCG2	P13521	617 aa		14.12	□□□□□ -0.15
CLTCL1-205	ENST00000538828	CPA1	P15085	419 aa		14.12	□□□□□ -0.15
CLTCL1-205	ENST00000538828	NAPA	P54920	295 aa		14.12	□□□□□ -0.15
CLTCL1-205	ENST00000538828	MDM2	Q00987	491 aa	Predicted RBP	14.12	□□□□□ -0.15
CLTCL1-205	ENST00000538828	TOB2	Q14106	344 aa	Predicted RBP	14.12	□□□□□ -0.15
CLTCL1-205	ENST00000538828	METTL7B	Q6UX53	244 aa		14.12	□□□□□ -0.15
CLTCL1-205	ENST00000538828	HEATR3	Q7Z4Q2	680 aa		14.12	□□□□□ -0.15
CLTCL1-205	ENST00000538828	RAB11FIP4	Q86YS3	637 aa		14.12	□□□□□ -0.15
CLTCL1-205	ENST00000538828	AFG1L	Q8WV93	481 aa		14.12	□□□□□ -0.15
CLTCL1-205	ENST00000538828	BAD	Q92934	168 aa		14.12	□□□□□ -0.15
CLTCL1-205	ENST00000538828	ZMYND12	Q9H0C1	365 aa		14.12	□□□□□ -0.15
CLTCL1-205	ENST00000538828	SH3GLB2	Q9NR46	395 aa		14.12	□□□□□ -0.15
CLTCL1-205	ENST00000538828	HAS3	O00219	553 aa		14.11	□□□□□ -0.15
CLTCL1-205	ENST00000538828	F2	P00734	622 aa		14.11	□□□□□ -0.15
CLTCL1-205	ENST00000538828	MYL3	P08590	195 aa		14.11	□□□□□ -0.15
CLTCL1-205	ENST00000538828	UBA1	P22314	1058 aa	Known RBP	14.11	□□□□□ -0.15
CLTCL1-205	ENST00000538828	GNA11	P29992	359 aa		14.11	□□□□□ -0.15
CLTCL1-205	ENST00000538828	CLK2	P49760	499 aa	Known RBP	14.11	□□□□□ -0.15
CLTCL1-205	ENST00000538828	AKAP17A	Q02040	695 aa	Known RBP	14.11	□□□□□ -0.15
CLTCL1-205	ENST00000538828	PPIG	Q13427	754 aa	Known RBP eCLIP	14.11	□□□□□ -0.15
CLTCL1-205	ENST00000538828	ANKRD1	Q15327	319 aa		14.11	□□□□□ -0.15
CLTCL1-205	ENST00000538828	TMEM199	Q8N511	208 aa		14.11	□□□□□ -0.15
CLTCL1-205	ENST00000538828	IL27	Q8NEV9	243 aa		14.11	□□□□□ -0.15
CLTCL1-205	ENST00000538828	PCDHA6	Q9UN73	950 aa		14.11	□□□□□ -0.15
CLTCL1-205	ENST00000538828	PCDHA8	Q9Y5H6	950 aa		14.11	□□□□□ -0.15
CLTCL1-205	ENST00000538828	UBIAD1	Q9Y5Z9	338 aa		14.11	□□□□□ -0.15
CLTCL1-205	ENST00000538828	LAMA3	Q16787	3333 aa		14.11	□□□□□ -0.15
CLTCL1-205	ENST00000538828	SMCO2	A6NFE2	343 aa		14.1	□□□□□ -0.15
CLTCL1-205	ENST00000538828	PITPNM1	O00562	1244 aa		14.1	□□□□□ -0.15
CLTCL1-205	ENST00000538828	B4GALT4	O60513	344 aa		14.1	□□□□□ -0.15
CLTCL1-205	ENST00000538828	GGPS1	O95749	300 aa		14.1	□□□□□ -0.15
CLTCL1-205	ENST00000538828	PTGS1	P23219	599 aa		14.1	□□□□□ -0.15
CLTCL1-205	ENST00000538828	ITGB8	P26012	769 aa		14.1	□□□□□ -0.15
CLTCL1-205	ENST00000538828	ADCY7	P51828	1080 aa		14.1	□□□□□ -0.15
CLTCL1-205	ENST00000538828	SP2	Q02086	613 aa		14.1	□□□□□ -0.15
CLTCL1-205	ENST00000538828	FPGS	Q05932	587 aa		14.1	□□□□□ -0.15
CLTCL1-205	ENST00000538828	PKN1	Q16512	942 aa		14.1	□□□□□ -0.15
CLTCL1-205	ENST00000538828	NBPF20	Q3BBV1	942 aa		14.1	□□□□□ -0.15
CLTCL1-205	ENST00000538828	TYW1B	Q6NUM6	668 aa		14.1	□□□□□ -0.15
CLTCL1-205	ENST00000538828	CPLX2	Q6PUV4	134 aa	Known RBP	14.1	□□□□□ -0.15
CLTCL1-205	ENST00000538828	NIPA1	Q7RTP0	329 aa		14.1	□□□□□ -0.15
CLTCL1-205	ENST00000538828	CCDC148	Q8NFR7	591 aa		14.1	□□□□□ -0.15
CLTCL1-205	ENST00000538828	BICD2	Q8TD16	824 aa		14.1	□□□□□ -0.15
CLTCL1-205	ENST00000538828	KAT2B	Q92831	832 aa		14.1	□□□□□ -0.15
CLTCL1-205	ENST00000538828	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	14.1	□□□□□ -0.15
CLTCL1-205	ENST00000538828	SPATA33	Q96N06	139 aa		14.1	□□□□□ -0.15
CLTCL1-205	ENST00000538828	MLXIP	Q9HAP2	919 aa		14.1	□□□□□ -0.15
CLTCL1-205	ENST00000538828	PDRG1	Q9NUG6	133 aa		14.1	□□□□□ -0.15
CLTCL1-205	ENST00000538828	hCG_1642624	A0A1W2PR95	340 aa		14.09	□□□□□ -0.15
CLTCL1-205	ENST00000538828	PARN	O95453	639 aa	Known RBP	14.09	□□□□□ -0.15
CLTCL1-205	ENST00000538828	PFKM	P08237	780 aa		14.09	□□□□□ -0.15
CLTCL1-205	ENST00000538828	SREBF1	P36956	1147 aa		14.09	□□□□□ -0.15
CLTCL1-205	ENST00000538828	PSMC6	P62333	389 aa		14.09	□□□□□ -0.15
CLTCL1-205	ENST00000538828	RBL2	Q08999	1139 aa		14.09	□□□□□ -0.15
CLTCL1-205	ENST00000538828	SEMA3F	Q13275	785 aa		14.09	□□□□□ -0.15
CLTCL1-205	ENST00000538828	HSDL1	Q3SXM5	330 aa		14.09	□□□□□ -0.15
CLTCL1-205	ENST00000538828	TRIM22	Q8IYM9	498 aa		14.09	□□□□□ -0.15
CLTCL1-205	ENST00000538828	NOC4L	Q9BVI4	516 aa	Known RBP	14.09	□□□□□ -0.15
CLTCL1-205	ENST00000538828	HIPK3	Q9H422	1215 aa		14.09	□□□□□ -0.15
CLTCL1-205	ENST00000538828	C6orf50	Q9HD87	102 aa		14.09	□□□□□ -0.15
CLTCL1-205	ENST00000538828	JADE2	Q9NQC1	790 aa		14.09	□□□□□ -0.15
CLTCL1-205	ENST00000538828	NAP1L2	Q9ULW6	460 aa	Predicted RBP	14.09	□□□□□ -0.15
CLTCL1-205	ENST00000538828	CYP3A4	P08684	503 aa		14.08	□□□□□ -0.16
CLTCL1-205	ENST00000538828	ITGB5	P18084	799 aa		14.08	□□□□□ -0.16
CLTCL1-205	ENST00000538828	FAM109B	Q6ICB4	259 aa	Predicted RBP	14.08	□□□□□ -0.16
CLTCL1-205	ENST00000538828	GALNT17	Q6IS24	598 aa		14.08	□□□□□ -0.16
CLTCL1-205	ENST00000538828	RPUSD2	Q8IZ73	545 aa	Known RBP	14.08	□□□□□ -0.16
CLTCL1-205	ENST00000538828	CAGE1	Q8TC20	777 aa		14.08	□□□□□ -0.16
CLTCL1-205	ENST00000538828	CRYGN	Q8WXF5	182 aa		14.08	□□□□□ -0.16
CLTCL1-205	ENST00000538828	ANO3	Q9BYT9	981 aa		14.08	□□□□□ -0.16
CLTCL1-205	ENST00000538828	C22orf23	Q9BZE7	217 aa		14.08	□□□□□ -0.16
CLTCL1-205	ENST00000538828	GTF2IRD1	Q9UHL9	959 aa		14.08	□□□□□ -0.16
CLTCL1-205	ENST00000538828	NOP56	O00567	594 aa	Known RBP	14.07	□□□□□ -0.16
CLTCL1-205	ENST00000538828	CPLX1	O14810	134 aa		14.07	□□□□□ -0.16
CLTCL1-205	ENST00000538828	CDKL5	O76039	1030 aa		14.07	□□□□□ -0.16
CLTCL1-205	ENST00000538828	DEXI	O95424	95 aa		14.07	□□□□□ -0.16
CLTCL1-205	ENST00000538828	KCNA2	P16389	499 aa		14.07	□□□□□ -0.16
CLTCL1-205	ENST00000538828	HOXC8	P31273	242 aa		14.07	□□□□□ -0.16
CLTCL1-205	ENST00000538828	RFC2	P35250	354 aa		14.07	□□□□□ -0.16
CLTCL1-205	ENST00000538828	PSEN2	P49810	448 aa		14.07	□□□□□ -0.16
CLTCL1-205	ENST00000538828	BFSP2	Q13515	415 aa		14.07	□□□□□ -0.16
CLTCL1-205	ENST00000538828	MTMR1	Q13613	665 aa		14.07	□□□□□ -0.16
CLTCL1-205	ENST00000538828	UBE2S	Q16763	222 aa		14.07	□□□□□ -0.16
CLTCL1-205	ENST00000538828	PSRC1	Q6PGN9	363 aa	Predicted RBP	14.07	□□□□□ -0.16
CLTCL1-205	ENST00000538828	CCDC155	Q8N6L0	562 aa		14.07	□□□□□ -0.16
CLTCL1-205	ENST00000538828	MXRA8	Q9BRK3	442 aa		14.07	□□□□□ -0.16
CLTCL1-205	ENST00000538828	C16orf70	Q9BSU1	422 aa		14.07	□□□□□ -0.16
CLTCL1-205	ENST00000538828	UPF3B	Q9BZI7	483 aa	Known RBP	14.07	□□□□□ -0.16
CLTCL1-205	ENST00000538828	TRPV6	Q9H1D0	765 aa		14.07	□□□□□ -0.16
CLTCL1-205	ENST00000538828	NFASC	O94856	1347 aa		14.07	□□□□□ -0.16
CLTCL1-205	ENST00000538828	MEIS1	O00470	390 aa		14.06	□□□□□ -0.16
CLTCL1-205	ENST00000538828	SMAD3	P84022	425 aa	Known RBP	14.06	□□□□□ -0.16
CLTCL1-205	ENST00000538828	SSRP1	Q08945	709 aa	Known RBP	14.06	□□□□□ -0.16
CLTCL1-205	ENST00000538828	MFSD10	Q14728	455 aa		14.06	□□□□□ -0.16
CLTCL1-205	ENST00000538828	SHH	Q15465	462 aa		14.06	□□□□□ -0.16

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