RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 TNFRSF25Q93038 417 aa9.93□□□□□ -0.82
SNHG1-209ENST00000538654 NOC4LQ9BVI4 516 aaKnown RBP9.93□□□□□ -0.82
SNHG1-209ENST00000538654 EPB41L4AQ9HCS5 686 aaPredicted RBP9.93□□□□□ -0.82
SNHG1-209ENST00000538654 INCENPQ9NQS7 918 aa9.93□□□□□ -0.82
SNHG1-209ENST00000538654 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.93□□□□□ -0.821e-323■■■■□ 19.6
SNHG1-209ENST00000538654 SWAP70Q9UH65 585 aa9.93□□□□□ -0.82
SNHG1-209ENST00000538654 PLAAQ9Y263 795 aa9.93□□□□□ -0.82
SNHG1-209ENST00000538654 RASSF10A6NK89 507 aa9.93□□□□□ -0.82
SNHG1-209ENST00000538654 NBPF26B4DH59 902 aa9.93□□□□□ -0.82
SNHG1-209ENST00000538654 MGRN1O60291 552 aa9.93□□□□□ -0.82
SNHG1-209ENST00000538654 LDHAP00338 332 aaKnown RBP9.93□□□□□ -0.82
SNHG1-209ENST00000538654 IBSPP21815 317 aaPredicted RBP9.93□□□□□ -0.82
SNHG1-209ENST00000538654 MAGEA1P43355 309 aa9.93□□□□□ -0.82
SNHG1-209ENST00000538654 CABP4P57796 275 aa9.93□□□□□ -0.82
SNHG1-209ENST00000538654 CDC37Q16543 378 aaPredicted RBP9.93□□□□□ -0.82
SNHG1-209ENST00000538654 EARS2Q5JPH6 523 aaKnown RBP9.93□□□□□ -0.82
SNHG1-209ENST00000538654 GKAP1Q5VSY0 366 aaPredicted RBP9.93□□□□□ -0.82
SNHG1-209ENST00000538654 NBPF10Q6P3W6 841 aaKnown RBP9.93□□□□□ -0.82
SNHG1-209ENST00000538654 TTLL7Q6ZT98 887 aa9.93□□□□□ -0.82
SNHG1-209ENST00000538654 THEMISQ8N1K5 641 aaPredicted RBP9.93□□□□□ -0.82
SNHG1-209ENST00000538654 NBPF15Q8N660 670 aa9.93□□□□□ -0.82
SNHG1-209ENST00000538654 MAB21L3Q8N8X9 362 aa9.93□□□□□ -0.82
SNHG1-209ENST00000538654 TMC2Q8TDI7 906 aa9.93□□□□□ -0.82
SNHG1-209ENST00000538654 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.93□□□□□ -0.82
SNHG1-209ENST00000538654 THRAP3Q9Y2W1 955 aaKnown RBP9.93□□□□□ -0.82
SNHG1-209ENST00000538654 COL22A1Q8NFW1 1626 aaPredicted RBP9.93□□□□□ -0.82
SNHG1-209ENST00000538654 RIC1Q4ADV7 1423 aa9.93□□□□□ -0.82
SNHG1-209ENST00000538654 MBD4O95243 580 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 PAEPP09466 180 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 FAM153BP0C7A2 387 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 PDHBP11177 359 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 CCNE1P24864 410 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 CXCR5P32302 372 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 SCTRP47872 440 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 ATP2B2Q01814 1243 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 TCIRG1Q13488 830 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 CUL1Q13616 776 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 FAM153CQ494X1 144 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 AGBL2Q5U5Z8 902 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 ARMC3Q5W041 872 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 TYW1BQ6NUM6 668 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 ARHGAP27Q6ZUM4 889 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 CCDC84Q86UT8 332 aaPredicted RBP9.92□□□□□ -0.82
SNHG1-209ENST00000538654 CCHCR1Q8TD31 782 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 SEC16BQ96JE7 1060 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 CNOT6LQ96LI5 555 aaKnown RBP9.92□□□□□ -0.82
SNHG1-209ENST00000538654 ZKSCAN3Q9BRR0 538 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 TLR10Q9BXR5 811 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 OSBPL7Q9BZF2 842 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 MAGEF1Q9HAY2 307 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 DISC1Q9NRI5 854 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 RNF19AQ9NV58 838 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 HAUS2Q9NVX0 235 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 FAM153AQ9UHL3 310 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 GNEQ9Y223 722 aaKnown RBP9.92□□□□□ -0.82
SNHG1-209ENST00000538654 RGPD5Q99666 1765 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 GLI3P10071 1580 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 SPDYE2BA6NHP3 402 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 SPDYE5A6NIY4 337 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 RTN2O75298 545 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 A1BGP04217 495 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 CSF1RP07333 972 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 SPDYE6P0CI01 402 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 HPDP32754 393 aaPredicted RBP9.92□□□□□ -0.82
SNHG1-209ENST00000538654 EIF4A3P38919 411 aaKnown RBP9.92□□□□□ -0.82
SNHG1-209ENST00000538654 GUCY2FP51841 1108 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 PMS1P54277 932 aaKnown RBP9.92□□□□□ -0.82
SNHG1-209ENST00000538654 MTMR3Q13615 1198 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 SPDYE2Q495Y8 402 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 MSL1Q68DK7 614 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 CRELD2Q6UXH1 353 aaPredicted RBP9.92□□□□□ -0.82
SNHG1-209ENST00000538654 KRT26Q7Z3Y9 468 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 CATIPQ7Z7H3 387 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 NT5DC4Q86YG4 428 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 C2CD5Q86YS7 1000 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 ESR2Q92731 530 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 P2RX5Q93086 422 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 CUEDC2Q9H467 287 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 TAF1DQ9H5J8 278 aaPredicted RBP9.92□□□□□ -0.82
SNHG1-209ENST00000538654 DDX56Q9NY93 547 aaKnown RBP9.92□□□□□ -0.82
SNHG1-209ENST00000538654 ARHGAP20Q9P2F6 1191 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 PALM3A6NDB9 673 aaPredicted RBP9.92□□□□□ -0.82
SNHG1-209ENST00000538654 GSG1L2A8MUP6 293 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 DNM1LO00429 736 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 PAX7P23759 505 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 MRPS25P82663 173 aaKnown RBP9.92□□□□□ -0.82
SNHG1-209ENST00000538654 ESCO1Q5FWF5 840 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 KLHDC7AQ5VTJ3 777 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 FAM228AQ86W67 206 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 ZCRB1Q8TBF4 217 aaKnown RBP9.92□□□□□ -0.82
SNHG1-209ENST00000538654 RBM33Q96EV2 1170 aaKnown RBP9.92□□□□□ -0.82
SNHG1-209ENST00000538654 DUSP9Q99956 384 aaKnown RBP9.92□□□□□ -0.82
SNHG1-209ENST00000538654 ISCA1Q9BUE6 129 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 EDEM3Q9BZQ6 932 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 ZBTB3Q9H5J0 574 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 SLC12A6Q9UHW9 1150 aa9.92□□□□□ -0.82
SNHG1-209ENST00000538654 PNPLA7Q6ZV29 1317 aa9.91□□□□□ -0.82
SNHG1-209ENST00000538654 DOCK2Q92608 1830 aa9.91□□□□□ -0.82
SNHG1-209ENST00000538654 PCCAP05165 728 aaPredicted RBP9.91□□□□□ -0.82
SNHG1-209ENST00000538654 PPP2R2AP63151 447 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms