RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 MRPL11Q9Y3B7 192 aaKnown RBP7.37□□□□□ -1.23
USP28-206ENST00000538224 MRFAP1Q9Y605 127 aa7.37□□□□□ -1.23
USP28-206ENST00000538224 UBE4BO95155 1302 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 TTC26A0AVF1 554 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 FRMD3A2A2Y4 597 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 FAM196BA6NMK8 535 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 YDJCA8MPS7 323 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 EIF3CLB5ME19 914 aaKnown RBP7.36□□□□□ -1.23
USP28-206ENST00000538224 USP17L15C9J2P7 530 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 USP17L13C9JLJ4 530 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 USP17L11C9JVI0 530 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 USP17L18D6R9N7 530 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 USP17L22D6RA61 530 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 USP17L17D6RBQ6 530 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 USP17L19D6RCP7 530 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 USP17L20D6RJB6 530 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 KRT86O43790 486 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 C21orf2O43822 256 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 EDIL3O43854 480 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 TADA3O75528 432 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 NDUFA10O95299 355 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 TUBBP07437 444 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 ASNSP08243 561 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 PLA2G4BP0C869 781 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 FCER1AP12319 257 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 GAP43P17677 238 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 ZNF76P36508 570 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 MARSP56192 900 aaKnown RBP7.36□□□□□ -1.23
USP28-206ENST00000538224 ERVK-24P63145 666 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 FKBP3Q00688 224 aaKnown RBP7.36□□□□□ -1.23
USP28-206ENST00000538224 USP17L24Q0WX57 530 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 TNFAIP1Q13829 316 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 ELF2Q15723 593 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 EZH2Q15910 746 aaKnown RBP7.36□□□□□ -1.23
USP28-206ENST00000538224 PTPN21Q16825 1174 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 WHAMMP3Q1A5X7 153 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 EDRF1Q3B7T1 1238 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 VWA3BQ502W6 1294 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 USP17L6PQ6QN14 398 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 DYMQ7RTS9 669 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 KRT26Q7Z3Y9 468 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 GPBP1Q86WP2 473 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 SIAH1Q8IUQ4 282 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 SAMD3Q8N6K7 520 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 GPR161Q8N6U8 529 aaKnown RBP7.36□□□□□ -1.23
USP28-206ENST00000538224 ETNPPLQ8TBG4 499 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 NEK9Q8TD19 979 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 TSC1Q92574 1164 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 DNAJC19Q96DA6 116 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 PRMT6Q96LA8 375 aaPredicted RBP7.36□□□□□ -1.23
USP28-206ENST00000538224 GMLQ99445 158 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 EIF3CQ99613 913 aaKnown RBP7.36□□□□□ -1.23
USP28-206ENST00000538224 NAPGQ99747 312 aaPredicted RBP7.36□□□□□ -1.23
USP28-206ENST00000538224 DESI2Q9BSY9 194 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 POLR3CQ9BUI4 534 aaPredicted RBP7.36□□□□□ -1.23
USP28-206ENST00000538224 TTYH3Q9C0H2 523 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 RANBP17Q9H2T7 1088 aaKnown RBP7.36□□□□□ -1.23
USP28-206ENST00000538224 NDST4Q9H3R1 872 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 VCPKMTQ9H867 229 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 MRPL44Q9H9J2 332 aaKnown RBP7.36□□□□□ -1.23
USP28-206ENST00000538224 LUC7LQ9NQ29 371 aaKnown RBP7.36□□□□□ -1.23
USP28-206ENST00000538224 ZNF219Q9P2Y4 722 aaPredicted RBP7.36□□□□□ -1.23
USP28-206ENST00000538224 FEM1BQ9UK73 627 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 FAM184BQ9ULE4 1060 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 PRR12Q9ULL5 1215 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 ZNRF3Q9ULT6 936 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 DNM3Q9UQ16 869 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 COL4A3BPQ9Y5P4 624 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 EPN1Q9Y6I3 576 aaPredicted RBP7.36□□□□□ -1.23
USP28-206ENST00000538224 PARP14Q460N5 1801 aa7.36□□□□□ -1.23
USP28-206ENST00000538224 CNTNAP1P78357 1384 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 POTEB3A0JP26 581 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 POTECB2RU33 542 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 TCP10L2B9ZVM9 353 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 GCOM1H8Y6P7 765 aaPredicted RBP7.35□□□□□ -1.23
USP28-206ENST00000538224 PSMD14O00487 310 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 ATP8B1O43520 1251 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 POLR2MP0CAP2 368 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 HNRNPH3P31942 346 aaKnown RBP7.35□□□□□ -1.23
USP28-206ENST00000538224 TGFB2P61812 414 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 MTF1Q14872 753 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 SPA17Q15506 151 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 KIF4BQ2VIQ3 1234 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 USH1GQ495M9 461 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 CCDC40Q4G0X9 1142 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 ZCWPW2Q504Y3 356 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 PRR16Q569H4 304 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 MIIPQ5JXC2 388 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 ZNF569Q5MCW4 686 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 POTEBQ6S5H4 581 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 STXBP4Q6ZWJ1 553 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 SRGAP1Q7Z6B7 1085 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 KIAA1328Q86T90 577 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 SYT2Q8N9I0 419 aaPredicted RBP7.35□□□□□ -1.23
USP28-206ENST00000538224 LPAR1Q92633 364 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 RABGGTAQ92696 567 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 RPGRIP1Q96KN7 1286 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 CARD6Q9BX69 1037 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 WDR11Q9BZH6 1224 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 SEMA6BQ9H3T3 888 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms